| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is ylxW [H]
Identifier: 148379436
GI number: 148379436
Start: 1597540
End: 1598271
Strand: Direct
Name: ylxW [H]
Synonym: CBO1464
Alternate gene names: 148379436
Gene position: 1597540-1598271 (Clockwise)
Preceding gene: 148379435
Following gene: 148379437
Centisome position: 41.1
GC content: 24.45
Gene sequence:
>732_bases ATGAGAAAAAACGAAGCTACTATATTTATATTCATAGCTTCTATAGCCATAGGAATATTAATCTCCATGAATATAAGTTT TAAAAAGGTAAATGCTAGAACTTTTTTAAATGTAAAACAATATCAAGAAGCACTTAATGAAAAAAATAAATTATACGCAG AAGTTAGTAACTTAAAAGAAAAATATAACGATTACTATGAAAAATTAGAAAAATATGAAAACCAATTGTCCAATGAAAAA GAAATAAGAGAAGAGGTTAATAAGGAGATTTTTCAAAACAAATTACAATTAGGAACTATACCTGTAGAAGGACCAGGAGT AAAGATAGTGTTAAATGATGCAGATAAGCAATTATTTGAAGGAGGAACTCATGAAGAAAATAAACTTAAATTAATACATA ATACAGATATAATACAGGTTATAAATGATTTAAAAAATGCTAAAGTAGAGGCTATATCTTTAAATGGTCAAAGAATAACT AATATTTCTGATATATATTGTGATGGAACTTTTATTGGAATAAATGGGGGAATAAAACTATTAGCTCCTTTTTATATTGA GGTTATAGGTGATAAAACATCAATTAAAGAATATATGCTTAGAAATGATGGATATCTTCAAATATTAATGCTTAGAAAAA TATATGTGGACATACAAGAAAAAGATAAAATAATAGTACCAGCTTATACTAATGATAAAAAACCAAAAAATATTAGATCT ACAGAAAAATAA
Upstream 100 bases:
>100_bases GGCTGCTGTAGTAGTTTTTGGAGGCAGAATATTTGATAATTTTGGAGTTATAAGAAGAATACTTATAGAAAAAGCTAAAT CTCATACTGAGGTGAAATAG
Downstream 100 bases:
>100_bases TTAGTTTAAAAGTGTTTAATTCTGAAGGACTTTTAGATTTTATAGAGAATATTATAAAGTAAATAATAATTAGGCTGTAA GGGGGCATAACTTTGGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MRKNEATIFIFIASIAIGILISMNISFKKVNARTFLNVKQYQEALNEKNKLYAEVSNLKEKYNDYYEKLEKYENQLSNEK EIREEVNKEIFQNKLQLGTIPVEGPGVKIVLNDADKQLFEGGTHEENKLKLIHNTDIIQVINDLKNAKVEAISLNGQRIT NISDIYCDGTFIGINGGIKLLAPFYIEVIGDKTSIKEYMLRNDGYLQILMLRKIYVDIQEKDKIIVPAYTNDKKPKNIRS TEK
Sequences:
>Translated_243_residues MRKNEATIFIFIASIAIGILISMNISFKKVNARTFLNVKQYQEALNEKNKLYAEVSNLKEKYNDYYEKLEKYENQLSNEK EIREEVNKEIFQNKLQLGTIPVEGPGVKIVLNDADKQLFEGGTHEENKLKLIHNTDIIQVINDLKNAKVEAISLNGQRIT NISDIYCDGTFIGINGGIKLLAPFYIEVIGDKTSIKEYMLRNDGYLQILMLRKIYVDIQEKDKIIVPAYTNDKKPKNIRS TEK >Mature_243_residues MRKNEATIFIFIASIAIGILISMNISFKKVNARTFLNVKQYQEALNEKNKLYAEVSNLKEKYNDYYEKLEKYENQLSNEK EIREEVNKEIFQNKLQLGTIPVEGPGVKIVLNDADKQLFEGGTHEENKLKLIHNTDIIQVINDLKNAKVEAISLNGQRIT NISDIYCDGTFIGINGGIKLLAPFYIEVIGDKTSIKEYMLRNDGYLQILMLRKIYVDIQEKDKIIVPAYTNDKKPKNIRS TEK
Specific function: May be involved in cell division and sporulation [H]
COG id: COG3879
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0749 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010273 [H]
Pfam domain/function: PF05949 DUF881 [H]
EC number: NA
Molecular weight: Translated: 27985; Mature: 27985
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKNEATIFIFIASIAIGILISMNISFKKVNARTFLNVKQYQEALNEKNKLYAEVSNLKE CCCCCCEEEEEHHHHHHHHHHCCCCEEEEECHHHEECHHHHHHHHHHHHHHHHHHHHHHH KYNDYYEKLEKYENQLSNEKEIREEVNKEIFQNKLQLGTIPVEGPGVKIVLNDADKQLFE HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCHHHHC GGTHEENKLKLIHNTDIIQVINDLKNAKVEAISLNGQRITNISDIYCDGTFIGINGGIKL CCCCCCCCEEEEECCHHHHHHHHHCCCEEEEEEECCCEECCCCEEEECCEEEEECCCHHH LAPFYIEVIGDKTSIKEYMLRNDGYLQILMLRKIYVDIQEKDKIIVPAYTNDKKPKNIRS HHHHHEEEECCCHHHHHHHHCCCCCEEEEEEHHHHHEECCCCCEEEEEECCCCCCCCCCC TEK CCC >Mature Secondary Structure MRKNEATIFIFIASIAIGILISMNISFKKVNARTFLNVKQYQEALNEKNKLYAEVSNLKE CCCCCCEEEEEHHHHHHHHHHCCCCEEEEECHHHEECHHHHHHHHHHHHHHHHHHHHHHH KYNDYYEKLEKYENQLSNEKEIREEVNKEIFQNKLQLGTIPVEGPGVKIVLNDADKQLFE HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCCHHHHC GGTHEENKLKLIHNTDIIQVINDLKNAKVEAISLNGQRITNISDIYCDGTFIGINGGIKL CCCCCCCCEEEEECCHHHHHHHHHCCCEEEEEEECCCEECCCCEEEECCEEEEECCCHHH LAPFYIEVIGDKTSIKEYMLRNDGYLQILMLRKIYVDIQEKDKIIVPAYTNDKKPKNIRS HHHHHEEEECCCHHHHHHHHCCCCCEEEEEEHHHHHEECCCCCEEEEEECCCCCCCCCCC TEK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2556375; 9384377; 12207695 [H]