Click here to switch to the map view.

The map label for this gene is 148379350

Identifier: 148379350

GI number: 148379350

Start: 1497756

End: 1499027

Strand: Direct

Name: 148379350

Synonym: CBO1374

Alternate gene names: NA

Gene position: 1497756-1499027 (Clockwise)

Preceding gene: 148379349

Following gene: 148379351

Centisome position: 38.53

GC content: 32.23

Gene sequence:

>1272_bases
ATGAGAATCTTAAAAAAAGGTGATAGAGGATCAGATGTTAGAAAAATTCAAGCAGTACTACAAAAGATAGGCTATGATGT
AGGGCCCATAGATGGAATATTTGGAAGTAATACAGAGGAAGCAGTTAAAAGGTTTCAACTGAATAATGGGTTAGTTGTGG
ATGGTATTATAGGACCTAAGACTTATGAGCTATTGAATAAGTTTATACTAGGTTACAATACTTATACTATAAAGCCTGGA
GATACTTTATATAATATAGCTAAAAGACACTATACTACTGTAGATAAAATAATGATTGCTAATCCTAATATAGACCCTAA
TAACCTTATTATAGGAAGCCAGATAATAGTTCCTATAGGCATTGATATAGTGGATACTAATGTTAACTATACTTACGAAA
TTATGGAAAAAGACATAATGGCTTTAAAAGAAAGATATCCTTTTATACAGGTAGGTGTTGCAGGAAAAAGTGTTTTAGGG
AAAAATTTATATTATATCAAATTAGGTGATGGGTCTAACGAAGTATTTTACAATGGAGCTCATCATGCATTAGAATGGAT
AACTGCATTATTGCTTATGAAATTTATTGAAGACTTTTCTAGAGCCTATAGTGAAGGCAGCAAAATAAAAGGATATAACA
TAAAAGATATTTGGAATAGAAGTAGTATTTATATAATGCCAATGGTAAATCCAGATGGGGTAGATTTAGTTATAAATGGA
CTTCAAAGGAATAATCCTTATTATGATGATTTAATAAAATGGAATAATGGCAGCACAGACTTTTCAAAAAATTGGCAAGC
TAATATAAAAGGAGTGGATTTAAATCATAATTATAATGCTTCTTGGTATGAGTCTAAAATTGCAGAAGAATCCTATGGTG
TGTATGGGCCAGGTCCTACTAGATATGGTGGGCCTTATCCCGAATCAGAACCTGAAAGCAGATCCGTTGCTGATTTTACA
AGGAATCATAACTTTAGATTAATATTAGCTTACCATAGTCAAGGAGAAGTAATATATTGGACTTATAGAGATATAATCCC
ACCAGGCGCAAGAGAAATTGGAGAATTATTTTCAAAAGTAAGTGGTTATGAGCTTTCAGAAACCGTTGGGATAGCCTCTT
ATGCAGGCTATAAGGACTGGTTCATAGCACAATTTAAAAGGCCAGGTTTTACCATAGAAGTAGGAAAAGGGACGAATCCA
TTGCCTCTAAGTCAATTTGATAAAATATATAGAGACAATATAGAAATACTTTTATTGGCACCAATTGTTTAA

Upstream 100 bases:

>100_bases
ATGGTGCTTAATTATGATGGCTGCTTTAGATTGTATAGTAATAAAATTTAGGTACTCACTTGTGAGATCATAAAATCATA
TAATGCTATGAGGTGATTTT

Downstream 100 bases:

>100_bases
TTTGTAGTTGAGTTATTATTTATTAATTTATAGCTTATATATTCGTGCTAGGATTAGGATATAGTAATACTATTAGTATA
ATATATTATTATTTATTAAA

Product: zinc carboxypeptidase family protein

Products: NA

Alternate protein names: Endopeptidase I; Gamma-D-glutamyl-L-diamino acid endopeptidase I; Gamma-D-glutamyl-meso-diaminopimelate peptidase I [H]

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MRILKKGDRGSDVRKIQAVLQKIGYDVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPKTYELLNKFILGYNTYTIKPG
DTLYNIAKRHYTTVDKIMIANPNIDPNNLIIGSQIIVPIGIDIVDTNVNYTYEIMEKDIMALKERYPFIQVGVAGKSVLG
KNLYYIKLGDGSNEVFYNGAHHALEWITALLLMKFIEDFSRAYSEGSKIKGYNIKDIWNRSSIYIMPMVNPDGVDLVING
LQRNNPYYDDLIKWNNGSTDFSKNWQANIKGVDLNHNYNASWYESKIAEESYGVYGPGPTRYGGPYPESEPESRSVADFT
RNHNFRLILAYHSQGEVIYWTYRDIIPPGAREIGELFSKVSGYELSETVGIASYAGYKDWFIAQFKRPGFTIEVGKGTNP
LPLSQFDKIYRDNIEILLLAPIV

Sequences:

>Translated_423_residues
MRILKKGDRGSDVRKIQAVLQKIGYDVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPKTYELLNKFILGYNTYTIKPG
DTLYNIAKRHYTTVDKIMIANPNIDPNNLIIGSQIIVPIGIDIVDTNVNYTYEIMEKDIMALKERYPFIQVGVAGKSVLG
KNLYYIKLGDGSNEVFYNGAHHALEWITALLLMKFIEDFSRAYSEGSKIKGYNIKDIWNRSSIYIMPMVNPDGVDLVING
LQRNNPYYDDLIKWNNGSTDFSKNWQANIKGVDLNHNYNASWYESKIAEESYGVYGPGPTRYGGPYPESEPESRSVADFT
RNHNFRLILAYHSQGEVIYWTYRDIIPPGAREIGELFSKVSGYELSETVGIASYAGYKDWFIAQFKRPGFTIEVGKGTNP
LPLSQFDKIYRDNIEILLLAPIV
>Mature_423_residues
MRILKKGDRGSDVRKIQAVLQKIGYDVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPKTYELLNKFILGYNTYTIKPG
DTLYNIAKRHYTTVDKIMIANPNIDPNNLIIGSQIIVPIGIDIVDTNVNYTYEIMEKDIMALKERYPFIQVGVAGKSVLG
KNLYYIKLGDGSNEVFYNGAHHALEWITALLLMKFIEDFSRAYSEGSKIKGYNIKDIWNRSSIYIMPMVNPDGVDLVING
LQRNNPYYDDLIKWNNGSTDFSKNWQANIKGVDLNHNYNASWYESKIAEESYGVYGPGPTRYGGPYPESEPESRSVADFT
RNHNFRLILAYHSQGEVIYWTYRDIIPPGAREIGELFSKVSGYELSETVGIASYAGYKDWFIAQFKRPGFTIEVGKGTNP
LPLSQFDKIYRDNIEILLLAPIV

Specific function: An endopeptidase which hydrolyzes the gamma-D-Glu- (L)meso-diaminopimelic acid bond of L-Ala-gamma-D-Glu-(L)meso- diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. It is active on spore cortex peptidoglycan [H]

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

Organism=Homo sapiens, GI188536067, Length=203, Percent_Identity=27.0935960591133, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI221316749, Length=225, Percent_Identity=25.3333333333333, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI25143424, Length=209, Percent_Identity=25.8373205741627, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71990304, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71990310, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF00246 Peptidase_M14 [H]

EC number: =3.4.19.11 [H]

Molecular weight: Translated: 47876; Mature: 47876

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILKKGDRGSDVRKIQAVLQKIGYDVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPK
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCH
TYELLNKFILGYNTYTIKPGDTLYNIAKRHYTTVDKIMIANPNIDPNNLIIGSQIIVPIG
HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCEEHEEEEECCCCCCCCEEECCEEEEEEC
IDIVDTNVNYTYEIMEKDIMALKERYPFIQVGVAGKSVLGKNLYYIKLGDGSNEVFYNGA
EEEEECCCCEEEHHHHHHHHHHHHCCCEEEEECCCCHHHCCCEEEEEECCCCCCEEECCH
HHALEWITALLLMKFIEDFSRAYSEGSKIKGYNIKDIWNRSSIYIMPMVNPDGVDLVING
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCEEEEEC
LQRNNPYYDDLIKWNNGSTDFSKNWQANIKGVDLNHNYNASWYESKIAEESYGVYGPGPT
HHCCCCCHHHHEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCC
RYGGPYPESEPESRSVADFTRNHNFRLILAYHSQGEVIYWTYRDIIPPGAREIGELFSKV
CCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHH
SGYELSETVGIASYAGYKDWFIAQFKRPGFTIEVGKGTNPLPLSQFDKIYRDNIEILLLA
CCCCHHHHHCHHHHCCCCCHHHEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEE
PIV
CCC
>Mature Secondary Structure
MRILKKGDRGSDVRKIQAVLQKIGYDVGPIDGIFGSNTEEAVKRFQLNNGLVVDGIIGPK
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCH
TYELLNKFILGYNTYTIKPGDTLYNIAKRHYTTVDKIMIANPNIDPNNLIIGSQIIVPIG
HHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCEEHEEEEECCCCCCCCEEECCEEEEEEC
IDIVDTNVNYTYEIMEKDIMALKERYPFIQVGVAGKSVLGKNLYYIKLGDGSNEVFYNGA
EEEEECCCCEEEHHHHHHHHHHHHCCCEEEEECCCCHHHCCCEEEEEECCCCCCEEECCH
HHALEWITALLLMKFIEDFSRAYSEGSKIKGYNIKDIWNRSSIYIMPMVNPDGVDLVING
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCEEEEEECCCCCCEEEEEC
LQRNNPYYDDLIKWNNGSTDFSKNWQANIKGVDLNHNYNASWYESKIAEESYGVYGPGPT
HHCCCCCHHHHEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCC
RYGGPYPESEPESRSVADFTRNHNFRLILAYHSQGEVIYWTYRDIIPPGAREIGELFSKV
CCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHH
SGYELSETVGIASYAGYKDWFIAQFKRPGFTIEVGKGTNPLPLSQFDKIYRDNIEILLLA
CCCCHHHHHCHHHHCCCCCHHHEEECCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEE
PIV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8503890; 3922755 [H]