| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148379345
Identifier: 148379345
GI number: 148379345
Start: 1493954
End: 1494961
Strand: Direct
Name: 148379345
Synonym: CBO1368
Alternate gene names: NA
Gene position: 1493954-1494961 (Clockwise)
Preceding gene: 148379344
Following gene: 148379346
Centisome position: 38.44
GC content: 29.07
Gene sequence:
>1008_bases ATGAAAAAGAGAATTGGTATATTATTAATGGCCTTTCTTTTAATTTTTTCAGCTTTATTTGTGGTAGGTTGCTCAAAAAA GGAGGAAAAGAAGGAAAGCACAAATACTACACAGGAAAGTAATAAAAAAGAAAAAATTAAAATAGCCACTTTAAAAGGAC CTACTGGTATGGGAATAGTTAAACTTATGGAAGAAAACAAAGAGGATTATGATATTTCTTTATTTGATGCTCCAGATCAA ATAGTTTCTAAAGTAGTAAGTGGAGAAGTAGATGCAGCGGCAGTTCCATCTAATTTGGCTTCTGTTTTATATAATAAAAC AAAGGGGCAAGTTCAATTAGTAGGAGTAAACACTTTAGGGGTCTTATATATTGTAGAAAACGGAGATACTATAAAAAATA TAAAAGATCTAAAGGGTGAAACTATTTATGCTACAGGAAAGGGGGCTACTCCAGAATTTATTTTGAATTATATATTAAAG AAGAATGGATTGGATCCAGATAAGGATGTAAAAATAGAATATAAAGCTCAACATAATGATTTAGCAACTTTAGTAGCTTC AAAAAAAGCAAAAATAGCAGTACTTCCAGAACCTTTTGTAACACTATCCAGAACTAAAAATAAGGATTTAAAAGTACAAT TAGATTTAACAAAGGAATGGGAAAAAGTATCTGGAGAAGGGAAATTAACCATGGGAGCATTGGTATTTAAAAAGGATTTC ATAGATAAAAGAGGAGAAGATGTAGAAACTTTTATAAATAATTATAAAAAATCTGTAGAGTTTGTAAATAACAATAAGGA AGAAGCTAGCAAACTTATGGAGAAAAACGGTATAGTATCAAAGGCAAAAATAGCACAGATGGCTATTCCAAAATGCAATA TAGTATTTATGGATTCTAAAGATTATATGAATTCTCTAGAAAAATTTTATAATATTTTAAAAGAAAATGACCCAAAATCC ATTGGAGGAAAACTACCAGATGAAGATTTCTATTATAAGGAAAAATAA
Upstream 100 bases:
>100_bases AATAAAGATAAAAAATATGAAATGGGAAAAGTCGAATCCAGTGTTTATATATGATTAAAAAATAAAAAGCTTATTAATAT AATACAAGGAGGTTATATAT
Downstream 100 bases:
>100_bases AATAATTTCAAAATTAGTTAGAAGAACTTTAATAATAATATTCTGGGCATTTATATGGGAGCTTAGCTCCCTTTTTATAA ATAACGAGATTTTACTTCCA
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKKRIGILLMAFLLIFSALFVVGCSKKEEKKESTNTTQESNKKEKIKIATLKGPTGMGIVKLMEENKEDYDISLFDAPDQ IVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLGVLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILK KNGLDPDKDVKIEYKAQHNDLATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEKVSGEGKLTMGALVFKKDF IDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAQMAIPKCNIVFMDSKDYMNSLEKFYNILKENDPKS IGGKLPDEDFYYKEK
Sequences:
>Translated_335_residues MKKRIGILLMAFLLIFSALFVVGCSKKEEKKESTNTTQESNKKEKIKIATLKGPTGMGIVKLMEENKEDYDISLFDAPDQ IVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLGVLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILK KNGLDPDKDVKIEYKAQHNDLATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEKVSGEGKLTMGALVFKKDF IDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAQMAIPKCNIVFMDSKDYMNSLEKFYNILKENDPKS IGGKLPDEDFYYKEK >Mature_335_residues MKKRIGILLMAFLLIFSALFVVGCSKKEEKKESTNTTQESNKKEKIKIATLKGPTGMGIVKLMEENKEDYDISLFDAPDQ IVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLGVLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILK KNGLDPDKDVKIEYKAQHNDLATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEKVSGEGKLTMGALVFKKDF IDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAQMAIPKCNIVFMDSKDYMNSLEKFYNILKENDPKS IGGKLPDEDFYYKEK
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37446; Mature: 37446
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRIGILLMAFLLIFSALFVVGCSKKEEKKESTNTTQESNKKEKIKIATLKGPTGMGIV CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHCCCCCEEEEEEECCCCCCHHH KLMEENKEDYDISLFDAPDQIVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLG HHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCHHCHHHHHHHHHCCCCCEEEEEEEECEE VLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILKKNGLDPDKDVKIEYKAQHND EEEEEECCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCH LATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEKVSGEGKLTMGALVFKKDF HHHHHHCCCCEEEECCCCCEEEECCCCCCEEEEEECCHHHHHHCCCCCEEHHHHHHHHHH IDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAQMAIPKCNIVFMDSK HHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCH DYMNSLEKFYNILKENDPKSIGGKLPDEDFYYKEK HHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKKRIGILLMAFLLIFSALFVVGCSKKEEKKESTNTTQESNKKEKIKIATLKGPTGMGIV CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHCCCCCEEEEEEECCCCCCHHH KLMEENKEDYDISLFDAPDQIVSKVVSGEVDAAAVPSNLASVLYNKTKGQVQLVGVNTLG HHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCHHCHHHHHHHHHCCCCCEEEEEEEECEE VLYIVENGDTIKNIKDLKGETIYATGKGATPEFILNYILKKNGLDPDKDVKIEYKAQHND EEEEEECCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCH LATLVASKKAKIAVLPEPFVTLSRTKNKDLKVQLDLTKEWEKVSGEGKLTMGALVFKKDF HHHHHHCCCCEEEECCCCCEEEECCCCCCEEEEEECCHHHHHHCCCCCEEHHHHHHHHHH IDKRGEDVETFINNYKKSVEFVNNNKEEASKLMEKNGIVSKAKIAQMAIPKCNIVFMDSK HHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEECCH DYMNSLEKFYNILKENDPKSIGGKLPDEDFYYKEK HHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA