Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is ywoG [H]
Identifier: 148379315
GI number: 148379315
Start: 1459952
End: 1461151
Strand: Direct
Name: ywoG [H]
Synonym: CBO1336
Alternate gene names: 148379315
Gene position: 1459952-1461151 (Clockwise)
Preceding gene: 148379312
Following gene: 148379316
Centisome position: 37.56
GC content: 28.5
Gene sequence:
>1200_bases ATGGAGACTAAAGAAAAACTATGGAGCAAATATTTTATATTAGCATTAATTATTACAGTAGGAGTAAATTTAACTTGTAA TTTATTATTATCTACCATATCTATATATGCTAAGAAAATTACTGGGGTAGATAGTTATGCAGGTATAATGACAGGAGCCT TTACATTGGCTGCTTTATTTATAAGAGTATTTGCAGGAAAGTTATTAGACAAACTTGGAAGAAAAAAAATATTGATATTA GGAGTAGTTATTACTGCATTTTCAACTATAGGATATATTTTTAGTAATGGGATAATATTACTTGTAATATTTAGAGTAAT GCAAGGCTTTGGTTTTGGTATTTCATCTACAGCCATAGCTACTATTGTTACTGATGTTACGCCACCGGCAAGAATGCTTG AGGGAATAGGATATTCAGGTGTTGGTATAACAATTACTACAGCCATAGGACCATCTATGGCACTTCACATAGTTGGAAGG GGATACAATGAGTTTAATTTATTATTTATTACAACTTTTGCAGTATCTATAATTACTATACTAGTAGCACTTTTTTTATC CTATGAGAAAAATATTAATATACAATGTGAAAAATTTAAGATTATAAAAAGTGATACAGATTCTAATAGGATTAGTAAAG AAATATTAATACCAGCTTTAATTCTATTTTTAGCAGCAGTTGCAGAAAGTACTATATTATCCTTCACAGCATTATATGGC ATAGAACTAGGATTTGATAATATAGGTTTATTTTTTACAATAAACGCACTAGGAATATTAGCATCAAGATTATTCATAAA TCAAATAGTGGATAAGCTTGGAATGAATACTGTATTGTCCATTGGACTTATAATATTCGCCTTTTCTATATTTGGAATAG CCATGGTAAAAACTATGTATATGTTATTAGTGTTGGGATTTTTATGTGGTATTATGATGGGATCATTATTACCTATAATA AATGTAATGATTTTAAATACTGTAAGCCAAGATAAAAAAGGTGTAGCAAATGCTATTTACTATGCATTATTAGATGGTGG TTATGGAATAGGATCAATATTGTGGGGAAGGATTATTATAAACTATGGATATAGAGCTATATATGCCTTAGCAGGTATTG TATTAGTAGCAGCTTTTGTAATATTTGCATTAAATTTATTTTATAGGGGATCTACAATATTAAAAAGGCATTATGAATAA
Upstream 100 bases:
>100_bases AATGAAATTTTATAAATCAATTGTAGCCTAAACTACAATCTATTTTCAAGGTTAAGAGTAAAATTTAATTTGCAGAATTT TTATGGGAGGCAGAAATATT
Downstream 100 bases:
>100_bases AAAGAATGTTATAAAGCTATGGGATGTTTATTTTTCCTATAGCTTTTTTATAAAGTAATGTAAATACATATATAAATCAG GATAAAAAATAAGAATAAAT
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALFIRVFAGKLLDKLGRKKILIL GVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIATIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGR GYNEFNLLFITTFAVSIITILVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILIPALILFLAAVAESTILSFTALYG IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMYMLLVLGFLCGIMMGSLLPII NVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIIINYGYRAIYALAGIVLVAAFVIFALNLFYRGSTILKRHYE
Sequences:
>Translated_399_residues METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALFIRVFAGKLLDKLGRKKILIL GVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIATIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGR GYNEFNLLFITTFAVSIITILVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILIPALILFLAAVAESTILSFTALYG IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMYMLLVLGFLCGIMMGSLLPII NVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIIINYGYRAIYALAGIVLVAAFVIFALNLFYRGSTILKRHYE >Mature_399_residues METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALFIRVFAGKLLDKLGRKKILIL GVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIATIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGR GYNEFNLLFITTFAVSIITILVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILIPALILFLAAVAESTILSFTALYG IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMYMLLVLGFLCGIMMGSLLPII NVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIIINYGYRAIYALAGIVLVAAFVIFALNLFYRGSTILKRHYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87082270, Length=375, Percent_Identity=23.7333333333333, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43427; Mature: 43427
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALF CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IRVFAGKLLDKLGRKKILILGVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHH TIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGRGYNEFNLLFITTFAVSIITI HHHHCCCCHHHHHHCCCCCCCCEEEEEECCCHHEEEEEECCCCCCHHHHHHHHHHHHHHH LVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILIPALILFLAAVAESTILSFTALYG HHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMY HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH MLLVLGFLCGIMMGSLLPIINVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NYGYRAIYALAGIVLVAAFVIFALNLFYRGSTILKRHYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure METKEKLWSKYFILALIITVGVNLTCNLLLSTISIYAKKITGVDSYAGIMTGAFTLAALF CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IRVFAGKLLDKLGRKKILILGVVITAFSTIGYIFSNGIILLVIFRVMQGFGFGISSTAIA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHH TIVTDVTPPARMLEGIGYSGVGITITTAIGPSMALHIVGRGYNEFNLLFITTFAVSIITI HHHHCCCCHHHHHHCCCCCCCCEEEEEECCCHHEEEEEECCCCCCHHHHHHHHHHHHHHH LVALFLSYEKNINIQCEKFKIIKSDTDSNRISKEILIPALILFLAAVAESTILSFTALYG HHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IELGFDNIGLFFTINALGILASRLFINQIVDKLGMNTVLSIGLIIFAFSIFGIAMVKTMY HEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH MLLVLGFLCGIMMGSLLPIINVMILNTVSQDKKGVANAIYYALLDGGYGIGSILWGRIII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH NYGYRAIYALAGIVLVAAFVIFALNLFYRGSTILKRHYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]