Click here to switch to the map view.

The map label for this gene is yebN [C]

Identifier: 148379271

GI number: 148379271

Start: 1403386

End: 1403991

Strand: Direct

Name: yebN [C]

Synonym: CBO1290

Alternate gene names: 148379271

Gene position: 1403386-1403991 (Clockwise)

Preceding gene: 148379270

Following gene: 148379272

Centisome position: 36.11

GC content: 30.69

Gene sequence:

>606_bases
ATGGACTTAATTAGTGTAATATTAATTAGTATAGGTTTGTCTATGGATGCCTTTGCAGTATCTATAACTAACGGAGCTAT
GATAAGTAAAGTCACAGCCTCGGAGGGAATCAGGATAGGGCTATTTTTTGGAGGATTCCAAGCACTGATGCCTCTAATAG
GGTGGTCTATAGGAATAAAATTTGAAAGCTATATAGCAGCATTAGATCATTGGATAGCTCTTATACTACTTTCTATTATT
GGGGGGAAAATGATATATGATAGTGTTAAGGAGAACCAAGATCATAAGGATGAAATTGCCTGTGATTATGCAGCGGGAGA
AAAGAAATGTTTAAATAATAAAACTCTTATACTTCTTGCTATAGCCACTAGTATAGATGCATTAGCTGTAGGAGTAAGTT
TTGCATTTTTAAAAGTTTCAATAATAAATACTATAATTATTATAGGTAGTATAACCTTTGTTATATGTTTTATTGGAGTT
ATGATAGGTAAAAAGTGTGGTAAACTTTTAAAAAAGAGAGCAGAAATTTTAGGGGGTGTTGTGTTAATATTAATAGGAGT
TAAAATATTCATACAACATACTAATATTTTATCTTACATATTTTAA

Upstream 100 bases:

>100_bases
TCTTGAATAATGAGACTCATGTATAGTTTTTAACTATGCATGGAGTCTTTTTTATTGTATAAAATTTATATTTTGGAAGT
TATATTAAGGAGGAAGCATA

Downstream 100 bases:

>100_bases
ATCAACAAAAAATAATATGATTAAATAATTCTTAGTTATATTATACATTAATTGGAGGGGTTTTTTTGAAGAAAAAAAAT
GTTATTGTAGTAGATAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MDLISVILISIGLSMDAFAVSITNGAMISKVTASEGIRIGLFFGGFQALMPLIGWSIGIKFESYIAALDHWIALILLSII
GGKMIYDSVKENQDHKDEIACDYAAGEKKCLNNKTLILLAIATSIDALAVGVSFAFLKVSIINTIIIIGSITFVICFIGV
MIGKKCGKLLKKRAEILGGVVLILIGVKIFIQHTNILSYIF

Sequences:

>Translated_201_residues
MDLISVILISIGLSMDAFAVSITNGAMISKVTASEGIRIGLFFGGFQALMPLIGWSIGIKFESYIAALDHWIALILLSII
GGKMIYDSVKENQDHKDEIACDYAAGEKKCLNNKTLILLAIATSIDALAVGVSFAFLKVSIINTIIIIGSITFVICFIGV
MIGKKCGKLLKKRAEILGGVVLILIGVKIFIQHTNILSYIF
>Mature_201_residues
MDLISVILISIGLSMDAFAVSITNGAMISKVTASEGIRIGLFFGGFQALMPLIGWSIGIKFESYIAALDHWIALILLSII
GGKMIYDSVKENQDHKDEIACDYAAGEKKCLNNKTLILLAIATSIDALAVGVSFAFLKVSIINTIIIIGSITFVICFIGV
MIGKKCGKLLKKRAEILGGVVLILIGVKIFIQHTNILSYIF

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0059 family

Homologues:

Organism=Escherichia coli, GI87081981, Length=193, Percent_Identity=41.9689119170984, Blast_Score=154, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1290_CLOBH (A5I1C7)

Other databases:

- EMBL:   CP000727
- EMBL:   AM412317
- RefSeq:   YP_001253812.1
- RefSeq:   YP_001387194.1
- STRING:   A5I1C7
- GeneID:   5185545
- GeneID:   5398570
- GenomeReviews:   AM412317_GR
- GenomeReviews:   CP000727_GR
- KEGG:   cbh:CLC_1328
- KEGG:   cbo:CBO1290
- HOGENOM:   HBG709685
- OMA:   WDHWVAF
- ProtClustDB:   CLSK899195
- BioCyc:   CBOT36826:CBO1290-MONOMER
- BioCyc:   CBOT441771:CLC_1328-MONOMER
- HAMAP:   MF_01521
- InterPro:   IPR003810
- InterPro:   IPR022929

Pfam domain/function: PF02659 DUF204

EC number: NA

Molecular weight: Translated: 21655; Mature: 21655

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x19964944)-; HASH(0x1a3c1500)-; HASH(0x1a230988)-; HASH(0x1a0db3ec)-; HASH(0x1a06603c)-; HASH(0x1a956598)-;

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLISVILISIGLSMDAFAVSITNGAMISKVTASEGIRIGLFFGGFQALMPLIGWSIGIK
CHHHHHHHHHHCCCCHHEEEEECCCHHEEEEHHCCCCEEEEEHHHHHHHHHHHHHHHCCH
FESYIAALDHWIALILLSIIGGKMIYDSVKENQDHKDEIACDYAAGEKKCLNNKTLILLA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHEECCCCCCHHHCCCCCEEEEE
IATSIDALAVGVSFAFLKVSIINTIIIIGSITFVICFIGVMIGKKCGKLLKKRAEILGGV
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLILIGVKIFIQHTNILSYIF
HHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MDLISVILISIGLSMDAFAVSITNGAMISKVTASEGIRIGLFFGGFQALMPLIGWSIGIK
CHHHHHHHHHHCCCCHHEEEEECCCHHEEEEHHCCCCEEEEEHHHHHHHHHHHHHHHCCH
FESYIAALDHWIALILLSIIGGKMIYDSVKENQDHKDEIACDYAAGEKKCLNNKTLILLA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHEECCCCCCHHHCCCCCEEEEE
IATSIDALAVGVSFAFLKVSIINTIIIIGSITFVICFIGVMIGKKCGKLLKKRAEILGGV
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLILIGVKIFIQHTNILSYIF
HHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA