Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is trxB2 [H]
Identifier: 148379243
GI number: 148379243
Start: 1375005
End: 1375946
Strand: Direct
Name: trxB2 [H]
Synonym: CBO1259
Alternate gene names: 148379243
Gene position: 1375005-1375946 (Clockwise)
Preceding gene: 148379242
Following gene: 148379244
Centisome position: 35.38
GC content: 32.38
Gene sequence:
>942_bases ATGGACAATGTTTATGATCTTATAATTATAGGCTCTGGTCCAGCAGGACTATCAGCAGGTTTATATGCTGCAAGAGCTAG ATTAAAAACTTTAATATTAGAGAGAAATAAAGCAGGTGGACAGATAGTAATAACAGATGAAGTGGCTAATTATCCAGGAT CTATAAGAGATGCTACAGGAGCAAGTTTAGTAGCTAGAATGGAAGAACAAGTGGATGAATTTGGAGCAGAAAGAAAAAAA GATAATGTTAAAGAGGTAGATTTTACTGGCAAAATAAAAATTATAAAGGGAGAAAAGGAAGAGTATAAGGCAAAATCTGT AATTATAGCTACTGGTGCTGCTCCTAGGCATATAGGCTGCAAAGGTGAAAATGAATTAATAGGAAAGGGAGTATCCTATT GTGCTACTTGTGATGCTGACTTTTTTACAGATTTAGAAGTTTTTGTAATAGGTGGAGGAGATTCAGCTTTAGAAGAAGCC TTATATCTTACTAAGTTTGCAAGAAAGGTAACAGTAGTTCATAGAAGAGATGCTCTAAGAGGAGCTAAATCAATACAAGA AAAAGTATTTAAAAATCCTAAAATAGAAATTATGTGGGATTCTGTAGTAGAGGAAATAAAAGGCGATGGAATAGTAGAAT CTGCAGTATTTAAAAATAAAAAAACAGGAGAAATAACTGAATACTTTGCAGATGAAGATGATGGAACTTTTGGAATATTT GTTTTTGTAGGATATTTACCTATAAACAATTTATTTAAAGATATTGTTACTATAAATGAAGCAGGATATATAAAAACTAA CGATAGAATGGAAACAAATATAGAGGGTATATTTGCTGCTGGTGATATAAGAGAAAAATCATTAAGACAGGTAGTTACTG CAGCGGCAGATGGTGCTATAGCAGCAGTAGAAGCTTATAAATATGTTGAAGATACTTTTTAA
Upstream 100 bases:
>100_bases TTTAATAGGTCTTAAATAGTTTCACGTGTTAATTTTATTTAAATAATTAGATTGGTAAAAATATAATTTTTAAGTATTAA ATTGTGGGGGGGAGCAAGAT
Downstream 100 bases:
>100_bases ATATAAAAAATTTATTTGAAAGGCGGTTATAAAATGTTAGTAGTTGATAAGAAAACTTTTGAAGACGAGGTATTAAAATC AGATGGTTATACGTTAGTAG
Product: thioredoxin-disulfide reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MDNVYDLIIIGSGPAGLSAGLYAARARLKTLILERNKAGGQIVITDEVANYPGSIRDATGASLVARMEEQVDEFGAERKK DNVKEVDFTGKIKIIKGEKEEYKAKSVIIATGAAPRHIGCKGENELIGKGVSYCATCDADFFTDLEVFVIGGGDSALEEA LYLTKFARKVTVVHRRDALRGAKSIQEKVFKNPKIEIMWDSVVEEIKGDGIVESAVFKNKKTGEITEYFADEDDGTFGIF VFVGYLPINNLFKDIVTINEAGYIKTNDRMETNIEGIFAAGDIREKSLRQVVTAAADGAIAAVEAYKYVEDTF
Sequences:
>Translated_313_residues MDNVYDLIIIGSGPAGLSAGLYAARARLKTLILERNKAGGQIVITDEVANYPGSIRDATGASLVARMEEQVDEFGAERKK DNVKEVDFTGKIKIIKGEKEEYKAKSVIIATGAAPRHIGCKGENELIGKGVSYCATCDADFFTDLEVFVIGGGDSALEEA LYLTKFARKVTVVHRRDALRGAKSIQEKVFKNPKIEIMWDSVVEEIKGDGIVESAVFKNKKTGEITEYFADEDDGTFGIF VFVGYLPINNLFKDIVTINEAGYIKTNDRMETNIEGIFAAGDIREKSLRQVVTAAADGAIAAVEAYKYVEDTF >Mature_313_residues MDNVYDLIIIGSGPAGLSAGLYAARARLKTLILERNKAGGQIVITDEVANYPGSIRDATGASLVARMEEQVDEFGAERKK DNVKEVDFTGKIKIIKGEKEEYKAKSVIIATGAAPRHIGCKGENELIGKGVSYCATCDADFFTDLEVFVIGGGDSALEEA LYLTKFARKVTVVHRRDALRGAKSIQEKVFKNPKIEIMWDSVVEEIKGDGIVESAVFKNKKTGEITEYFADEDDGTFGIF VFVGYLPINNLFKDIVTINEAGYIKTNDRMETNIEGIFAAGDIREKSLRQVVTAAADGAIAAVEAYKYVEDTF
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=313, Percent_Identity=36.741214057508, Blast_Score=208, Evalue=4e-55, Organism=Escherichia coli, GI87081763, Length=321, Percent_Identity=32.7102803738318, Blast_Score=138, Evalue=6e-34, Organism=Saccharomyces cerevisiae, GI6320560, Length=316, Percent_Identity=38.9240506329114, Blast_Score=199, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6321898, Length=318, Percent_Identity=35.8490566037736, Blast_Score=187, Evalue=1e-48,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 34194; Mature: 34194
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNVYDLIIIGSGPAGLSAGLYAARARLKTLILERNKAGGQIVITDEVANYPGSIRDATG CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCH ASLVARMEEQVDEFGAERKKDNVKEVDFTGKIKIIKGEKEEYKAKSVIIATGAAPRHIGC HHHHHHHHHHHHHHCHHHCCCCCEEECCCCEEEEEECCHHHHCCCEEEEEECCCCCCCCC KGENELIGKGVSYCATCDADFFTDLEVFVIGGGDSALEEALYLTKFARKVTVVHRRDALR CCCCHHHHCCCCCEEECCCCHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH GAKSIQEKVFKNPKIEIMWDSVVEEIKGDGIVESAVFKNKKTGEITEYFADEDDGTFGIF HHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCEEEE VFVGYLPINNLFKDIVTINEAGYIKTNDRMETNIEGIFAAGDIREKSLRQVVTAAADGAI EEEEHHCHHHHHHHHHEECCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHH AAVEAYKYVEDTF HHHHHHHHHHHCC >Mature Secondary Structure MDNVYDLIIIGSGPAGLSAGLYAARARLKTLILERNKAGGQIVITDEVANYPGSIRDATG CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCH ASLVARMEEQVDEFGAERKKDNVKEVDFTGKIKIIKGEKEEYKAKSVIIATGAAPRHIGC HHHHHHHHHHHHHHCHHHCCCCCEEECCCCEEEEEECCHHHHCCCEEEEEECCCCCCCCC KGENELIGKGVSYCATCDADFFTDLEVFVIGGGDSALEEALYLTKFARKVTVVHRRDALR CCCCHHHHCCCCCEEECCCCHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH GAKSIQEKVFKNPKIEIMWDSVVEEIKGDGIVESAVFKNKKTGEITEYFADEDDGTFGIF HHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCEEEE VFVGYLPINNLFKDIVTINEAGYIKTNDRMETNIEGIFAAGDIREKSLRQVVTAAADGAI EEEEHHCHHHHHHHHHEECCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHH AAVEAYKYVEDTF HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8223622; 2537814 [H]