| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148379093
Identifier: 148379093
GI number: 148379093
Start: 1216705
End: 1217682
Strand: Direct
Name: 148379093
Synonym: CBO1105
Alternate gene names: NA
Gene position: 1216705-1217682 (Clockwise)
Preceding gene: 148379092
Following gene: 148379095
Centisome position: 31.3
GC content: 22.29
Gene sequence:
>978_bases ATGAGCAAACCTATTATAGATACATATATAAGTAGATTTGAAAATAAAGAAAAAATATTTAAATATAATTTAGACCTATA TCAATGTAAAAATATAAATAAATTATATTATTACACTAGCATAAGTACTTTAGAAAATATAATAAGTAAGAAAAATATTT GGCTATCTAATAGTAAGTATCTTAATGATAGTACAGAAATAAATTATACCAACAATTTGATTTATGATATATGTGAAGAA TATTTGGATGGGAATGAAGAATTTGATAAATTTTTCAAAGAAAATATAGAAATTTTGCTGCATACTATAGATATGGAATT AGGGGATACTTACATATTGTCTCTTACGGAAAATAAAGATTCCTTAGCTCTTTGGTCTAATTATTCTAATTATGATGGAT ATAATTTAGCATTTAATTGTGATTATTTTCAGAATATATTTACAGAAGAAAATTATAGGTTTATAGATAAAAATAAAAAT TCTATTTTCTTAAATGAGGGGGAAGATTTTGTATGGTATTTTGGAGAGGTTATATATAACAAGGAACACCAGGGAAATAT AATAAAGGAAAGAGTAGAATTTTTATATAATTTATATAAAAATTTTTATGAATTTAAAGAAGATGATGATTTTAAATCTT TAATAGTGTATGTGCTCTATAATATAGCTTATATAGCTACTTTTTTTAAAGATGAGAGTTTTAAAGAGGAACAAGAACAT AGGTTAGTGTTTAGAGTTATTAATAAAAATATAAAAAAGCAAATAGTAAAACATAGAATTTCAAATAGAGTTTTTATTCC TTATATAGAATTAGGTCTTAATCAAAATACAAAAGAAGGTAATTTACCTGTAGAGAAGATAACTATAGGTCCTAAAAATA ATTTAGATATTGCAGAAATGGGCTTGAGATCTTTTTTAGAAAGTGAAGGATATTACAAAATAACTATAAAGAAATCTAAG ATACCTTTAAGATATTAA
Upstream 100 bases:
>100_bases AATGTAAATAAAATATTTTCTAAAGGATAAGAATAATAAGTAAAAGCTATGATAGAAATCATAGCTTTTATAAATTTACG TTAAATGAGGTATTGATATT
Downstream 100 bases:
>100_bases AATTTATAAAGATGTAAGTAAGTATAAGTTAGAAATGGGAATATAATAAGTGTAGAATTATAAGTTTGAAGTTGTAGATG GAAGATTGTAATTGATAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSKPIIDTYISRFENKEKIFKYNLDLYQCKNINKLYYYTSISTLENIISKKNIWLSNSKYLNDSTEINYTNNLIYDICEE YLDGNEEFDKFFKENIEILLHTIDMELGDTYILSLTENKDSLALWSNYSNYDGYNLAFNCDYFQNIFTEENYRFIDKNKN SIFLNEGEDFVWYFGEVIYNKEHQGNIIKERVEFLYNLYKNFYEFKEDDDFKSLIVYVLYNIAYIATFFKDESFKEEQEH RLVFRVINKNIKKQIVKHRISNRVFIPYIELGLNQNTKEGNLPVEKITIGPKNNLDIAEMGLRSFLESEGYYKITIKKSK IPLRY
Sequences:
>Translated_325_residues MSKPIIDTYISRFENKEKIFKYNLDLYQCKNINKLYYYTSISTLENIISKKNIWLSNSKYLNDSTEINYTNNLIYDICEE YLDGNEEFDKFFKENIEILLHTIDMELGDTYILSLTENKDSLALWSNYSNYDGYNLAFNCDYFQNIFTEENYRFIDKNKN SIFLNEGEDFVWYFGEVIYNKEHQGNIIKERVEFLYNLYKNFYEFKEDDDFKSLIVYVLYNIAYIATFFKDESFKEEQEH RLVFRVINKNIKKQIVKHRISNRVFIPYIELGLNQNTKEGNLPVEKITIGPKNNLDIAEMGLRSFLESEGYYKITIKKSK IPLRY >Mature_324_residues SKPIIDTYISRFENKEKIFKYNLDLYQCKNINKLYYYTSISTLENIISKKNIWLSNSKYLNDSTEINYTNNLIYDICEEY LDGNEEFDKFFKENIEILLHTIDMELGDTYILSLTENKDSLALWSNYSNYDGYNLAFNCDYFQNIFTEENYRFIDKNKNS IFLNEGEDFVWYFGEVIYNKEHQGNIIKERVEFLYNLYKNFYEFKEDDDFKSLIVYVLYNIAYIATFFKDESFKEEQEHR LVFRVINKNIKKQIVKHRISNRVFIPYIELGLNQNTKEGNLPVEKITIGPKNNLDIAEMGLRSFLESEGYYKITIKKSKI PLRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39120; Mature: 38989
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPIIDTYISRFENKEKIFKYNLDLYQCKNINKLYYYTSISTLENIISKKNIWLSNSKY CCCCHHHHHHHHHCCCCCEEEECCCCEEECCCCEEEEEEEHHHHHHHHHHCCEEECCCCC LNDSTEINYTNNLIYDICEEYLDGNEEFDKFFKENIEILLHTIDMELGDTYILSLTENKD CCCCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCC SLALWSNYSNYDGYNLAFNCDYFQNIFTEENYRFIDKNKNSIFLNEGEDFVWYFGEVIYN CEEEECCCCCCCCEEEEEECHHHHHHHCCCCEEEEECCCCEEEEECCCCEEEEEEHHHCC KEHQGNIIKERVEFLYNLYKNFYEFKEDDDFKSLIVYVLYNIAYIATFFKDESFKEEQEH CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RLVFRVINKNIKKQIVKHRISNRVFIPYIELGLNQNTKEGNLPVEKITIGPKNNLDIAEM HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHH GLRSFLESEGYYKITIKKSKIPLRY HHHHHHHCCCEEEEEEEECCCCCCC >Mature Secondary Structure SKPIIDTYISRFENKEKIFKYNLDLYQCKNINKLYYYTSISTLENIISKKNIWLSNSKY CCCHHHHHHHHHCCCCCEEEECCCCEEECCCCEEEEEEEHHHHHHHHHHCCEEECCCCC LNDSTEINYTNNLIYDICEEYLDGNEEFDKFFKENIEILLHTIDMELGDTYILSLTENKD CCCCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCCCEEEEEEECCCC SLALWSNYSNYDGYNLAFNCDYFQNIFTEENYRFIDKNKNSIFLNEGEDFVWYFGEVIYN CEEEECCCCCCCCEEEEEECHHHHHHHCCCCEEEEECCCCEEEEECCCCEEEEEEHHHCC KEHQGNIIKERVEFLYNLYKNFYEFKEDDDFKSLIVYVLYNIAYIATFFKDESFKEEQEH CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RLVFRVINKNIKKQIVKHRISNRVFIPYIELGLNQNTKEGNLPVEKITIGPKNNLDIAEM HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHH GLRSFLESEGYYKITIKKSKIPLRY HHHHHHHCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA