Click here to switch to the map view.

The map label for this gene is 148379092

Identifier: 148379092

GI number: 148379092

Start: 1216061

End: 1216606

Strand: Direct

Name: 148379092

Synonym: CBO1104

Alternate gene names: NA

Gene position: 1216061-1216606 (Clockwise)

Preceding gene: 148379091

Following gene: 148379093

Centisome position: 31.29

GC content: 21.25

Gene sequence:

>546_bases
ATGAATTCTCATAGGAAAAAATATTTTTTAATATTTTTTATTTCAGGATTGGTTTTGATATTTGTATCATTTATTAGTTA
TAACTATGGTAAAAATGTTGTAATAAAGAATTTTATTAAATCAGGAGACGTGTATATAAATAAAAAAGAATATATTAAAG
CTATAGCAATATATGAGGAAGTAGTAAAATATGATAGAAATGATACGGATAAAAATATGTTAAAATTAGCGATGTCCATG
CAAAATTCTAGAAAATCCTATCATGATGGGATGATATATTACAATAGAAAGCAATACTTAAAAGCTTTAAAATGCTTTAG
ACAAGTTATGGAAAATGATACTATAGCCTTTAATAAAGCGCAGGAAAAAATTAAAGAATGTACAGAAAAATATATAGAAG
ATAATTTAAAAAATGCAGAGAAATCTATACATAATTTAAAATATAAGGAGGCTAACGAATATCTAAATAATATTTTTAAA
TTAGATAAAGATAATGAAGAGGCTAAAAAATTAAAAGACATATTAAATAAAAAATATTTTAATTAA

Upstream 100 bases:

>100_bases
ATTTATTTTAATACATCATCAACAAATTTATTTGGAACTGTAGTATAATTAAAATGTGTACATTTTGTAAATATATTTTG
ACCATATATGGAGGTAAGCG

Downstream 100 bases:

>100_bases
TGTAAATAAAATATTTTCTAAAGGATAAGAATAATAAGTAAAAGCTATGATAGAAATCATAGCTTTTATAAATTTACGTT
AAATGAGGTATTGATATTAT

Product: TPR domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNSHRKKYFLIFFISGLVLIFVSFISYNYGKNVVIKNFIKSGDVYINKKEYIKAIAIYEEVVKYDRNDTDKNMLKLAMSM
QNSRKSYHDGMIYYNRKQYLKALKCFRQVMENDTIAFNKAQEKIKECTEKYIEDNLKNAEKSIHNLKYKEANEYLNNIFK
LDKDNEEAKKLKDILNKKYFN

Sequences:

>Translated_181_residues
MNSHRKKYFLIFFISGLVLIFVSFISYNYGKNVVIKNFIKSGDVYINKKEYIKAIAIYEEVVKYDRNDTDKNMLKLAMSM
QNSRKSYHDGMIYYNRKQYLKALKCFRQVMENDTIAFNKAQEKIKECTEKYIEDNLKNAEKSIHNLKYKEANEYLNNIFK
LDKDNEEAKKLKDILNKKYFN
>Mature_181_residues
MNSHRKKYFLIFFISGLVLIFVSFISYNYGKNVVIKNFIKSGDVYINKKEYIKAIAIYEEVVKYDRNDTDKNMLKLAMSM
QNSRKSYHDGMIYYNRKQYLKALKCFRQVMENDTIAFNKAQEKIKECTEKYIEDNLKNAEKSIHNLKYKEANEYLNNIFK
LDKDNEEAKKLKDILNKKYFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21735; Mature: 21735

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSHRKKYFLIFFISGLVLIFVSFISYNYGKNVVIKNFIKSGDVYINKKEYIKAIAIYEE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHH
VVKYDRNDTDKNMLKLAMSMQNSRKSYHDGMIYYNRKQYLKALKCFRQVMENDTIAFNKA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCHHHHH
QEKIKECTEKYIEDNLKNAEKSIHNLKYKEANEYLNNIFKLDKDNEEAKKLKDILNKKYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
N
C
>Mature Secondary Structure
MNSHRKKYFLIFFISGLVLIFVSFISYNYGKNVVIKNFIKSGDVYINKKEYIKAIAIYEE
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHH
VVKYDRNDTDKNMLKLAMSMQNSRKSYHDGMIYYNRKQYLKALKCFRQVMENDTIAFNKA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHCCCCCHHHHH
QEKIKECTEKYIEDNLKNAEKSIHNLKYKEANEYLNNIFKLDKDNEEAKKLKDILNKKYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA