Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is thiJ [C]
Identifier: 148379015
GI number: 148379015
Start: 1126794
End: 1127378
Strand: Reverse
Name: thiJ [C]
Synonym: CBO1025
Alternate gene names: 148379015
Gene position: 1127378-1126794 (Counterclockwise)
Preceding gene: 148379022
Following gene: 148379013
Centisome position: 29.0
GC content: 33.5
Gene sequence:
>585_bases ATGAAAAAAGTATTATTACTTCTTGCCAATGGTTTTGAGGCTGTAGAAGCAAGTGTTTTTACAGATGTTATAGGATGGAA CAAATTAGAAGGTGATGGTACCACAGAATTAATAACTGTTGGAATAAGAGAAAAATTAAAATGTACTTTTAACTTCACAG TAACTCCTGAAATGCATGTCAGTGAAGTTAATATTGATGAATTTGATGCACTTGCAATACCAGGTGGATTTGAAGAAGCA GGATTTTATGAAGATGCTTATAGCGAAGATTTTTTAAACATAATCAGAGAATTTGACAAAGCAAGAAAAACAATAGCTTC TATTTGCGTTGGTGCGCTGCCTATTGGGAAAAGTGGAGTACTAGTTAATAGAAATGCCACAACTTACAATTTAGGAAATG GTAGAAGGCAAAAACAATTATCTGAATTTGGTGCAAATGTTCTTCGTGATGAACCTGTTGTTGTAGATAAAAATATAATC ACTTCCTACAATCCTTCAACTGCTTTCCATGTAGCTTTCAAACTTTTAGAGCTGCTCACCTCTAAAGAAAACTGTGTTAA TGTTAAGAGACTAATGGGGTTTTAG
Upstream 100 bases:
>100_bases ATTATTAATTTCATTTATTTCAATTTTACTGATAGCACATATAGCATTATACTTAAGAAAAACAAATCTAAAATATATAA TTAAAAGGAGATATCAAAGT
Downstream 100 bases:
>100_bases CAAAATAATAAAGTACCAAATTTACTATATTAGAACAAAAGCAATATTCTTAAGAGACGTAACAAGGACTTACTTTTTTA TGGTAGGTCCTATTTTATTA
Product: DJ-1/PfpI family protein
Products: NA
Alternate protein names: Intracellular Protease/Amidase; DJ-1/PfpI Family Protein; Protein ThiJ; ThiJ/PfpI Family Protein; Protease; ThiJ/PfpI Domain Protein; ThiJ/PfpI Domain-Containing Protein; Thij/Pfpi DomaiN-Containing Protein; Protease I; Protease DJ-1/PfpI Family; Metal Dependent Phosphohydrolase; Dj-1/Pfpi Family
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MKKVLLLLANGFEAVEASVFTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHVSEVNIDEFDALAIPGGFEEA GFYEDAYSEDFLNIIREFDKARKTIASICVGALPIGKSGVLVNRNATTYNLGNGRRQKQLSEFGANVLRDEPVVVDKNII TSYNPSTAFHVAFKLLELLTSKENCVNVKRLMGF
Sequences:
>Translated_194_residues MKKVLLLLANGFEAVEASVFTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHVSEVNIDEFDALAIPGGFEEA GFYEDAYSEDFLNIIREFDKARKTIASICVGALPIGKSGVLVNRNATTYNLGNGRRQKQLSEFGANVLRDEPVVVDKNII TSYNPSTAFHVAFKLLELLTSKENCVNVKRLMGF >Mature_194_residues MKKVLLLLANGFEAVEASVFTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHVSEVNIDEFDALAIPGGFEEA GFYEDAYSEDFLNIIREFDKARKTIASICVGALPIGKSGVLVNRNATTYNLGNGRRQKQLSEFGANVLRDEPVVVDKNII TSYNPSTAFHVAFKLLELLTSKENCVNVKRLMGF
Specific function: Thiamine biosynthesis [C]
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI28571932, Length=193, Percent_Identity=26.9430051813472, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI24653499, Length=195, Percent_Identity=29.2307692307692, Blast_Score=67, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21475; Mature: 21475
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVLLLLANGFEAVEASVFTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHV CCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCEE SEVNIDEFDALAIPGGFEEAGFYEDAYSEDFLNIIREFDKARKTIASICVGALPIGKSGV EECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LVNRNATTYNLGNGRRQKQLSEFGANVLRDEPVVVDKNIITSYNPSTAFHVAFKLLELLT EEECCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCHHHHHHHHHHHHHH SKENCVNVKRLMGF CCCHHHHHHHHHCC >Mature Secondary Structure MKKVLLLLANGFEAVEASVFTDVIGWNKLEGDGTTELITVGIREKLKCTFNFTVTPEMHV CCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCEE SEVNIDEFDALAIPGGFEEAGFYEDAYSEDFLNIIREFDKARKTIASICVGALPIGKSGV EECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE LVNRNATTYNLGNGRRQKQLSEFGANVLRDEPVVVDKNIITSYNPSTAFHVAFKLLELLT EEECCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCHHHHHHHHHHHHHH SKENCVNVKRLMGF CCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA