Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148378867
Identifier: 148378867
GI number: 148378867
Start: 977378
End: 978139
Strand: Reverse
Name: 148378867
Synonym: CBO0875
Alternate gene names: NA
Gene position: 978139-977378 (Counterclockwise)
Preceding gene: 148378868
Following gene: 148378866
Centisome position: 25.16
GC content: 33.2
Gene sequence:
>762_bases ATGCAGGCAAAATATGATAAATTTCAGGAGTATGTGTTGGAAATTGGGCGACGCATGGTAATGTGTGGAGCTGAGGTCCG TCGTGTAGAAGATACAATTATACGTATCTGTAATGCATATGACATTAAAGTCTGTAATGTATACGCCATTACAACTTTGA TTATTATGACAATGAAAGATAGTGAAGGAAGACATTATACACAGTCAGTTAGAATTAATTCTACAGCAACGGATTTAGGT CAGTTAGAAGCATTAAATGCTATGGCTAGAGAAATATGCAGTAAAGTTCCCCCCATTTCTGAAATAGGTTCTGCATTGGA TAATAATAAGTTGCGTAAAGAGAGTAATATTAAAAAGTGTATAGGATATATGCTAGCCGCCAGTGGATTTGCCGTATTTT TTGGAGGAACCTTCCTAGACGGTTTGGTAGCTGCAGTTATTGCAATTGCAATATTTGGAATGGATCATTTTTTTCAAATT CGTAAATTAAATCGTGTAATATATACAGTAATTGCCTGTTTTTTATCAGGCTGCCTTGCTCAATTATGTGGCCATTTTGG ACTTTGTATGAATGTGGATAAAGTTATGATTGGAGATATAATGATATTTATACCAGCATTAATTTTAATAAATGGTGTAA AAGAAATATTCTATCAAGATATAATGCCTGGATTATATAGACTAATTGAAGCATTTATGATTGCTCTTTCAATTGCAATA GGATTTGTAGGTTCAATGATGTTATTAGGAGGTATACTTTAA
Upstream 100 bases:
>100_bases ATTATATAATTATATATGTCTAAATTTGTTTCACAATTAACATTTATATTAAGAAATATGTATATGAAAAAAACAATTTT TAATGGAGAGGTTATTTATT
Downstream 100 bases:
>100_bases TGTTGAAAAATATAATACAAGTGCTAATGGCAGGAGTTGGCACCCTGGGATTTACACTATTTTTTTCTGTAGCCAAAAAA CATGTGGCCGCAGCAACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MQAKYDKFQEYVLEIGRRMVMCGAEVRRVEDTIIRICNAYDIKVCNVYAITTLIIMTMKDSEGRHYTQSVRINSTATDLG QLEALNAMAREICSKVPPISEIGSALDNNKLRKESNIKKCIGYMLAASGFAVFFGGTFLDGLVAAVIAIAIFGMDHFFQI RKLNRVIYTVIACFLSGCLAQLCGHFGLCMNVDKVMIGDIMIFIPALILINGVKEIFYQDIMPGLYRLIEAFMIALSIAI GFVGSMMLLGGIL
Sequences:
>Translated_253_residues MQAKYDKFQEYVLEIGRRMVMCGAEVRRVEDTIIRICNAYDIKVCNVYAITTLIIMTMKDSEGRHYTQSVRINSTATDLG QLEALNAMAREICSKVPPISEIGSALDNNKLRKESNIKKCIGYMLAASGFAVFFGGTFLDGLVAAVIAIAIFGMDHFFQI RKLNRVIYTVIACFLSGCLAQLCGHFGLCMNVDKVMIGDIMIFIPALILINGVKEIFYQDIMPGLYRLIEAFMIALSIAI GFVGSMMLLGGIL >Mature_253_residues MQAKYDKFQEYVLEIGRRMVMCGAEVRRVEDTIIRICNAYDIKVCNVYAITTLIIMTMKDSEGRHYTQSVRINSTATDLG QLEALNAMAREICSKVPPISEIGSALDNNKLRKESNIKKCIGYMLAASGFAVFFGGTFLDGLVAAVIAIAIFGMDHFFQI RKLNRVIYTVIACFLSGCLAQLCGHFGLCMNVDKVMIGDIMIFIPALILINGVKEIFYQDIMPGLYRLIEAFMIALSIAI GFVGSMMLLGGIL
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28032; Mature: 28032
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAKYDKFQEYVLEIGRRMVMCGAEVRRVEDTIIRICNAYDIKVCNVYAITTLIIMTMKD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC SEGRHYTQSVRINSTATDLGQLEALNAMAREICSKVPPISEIGSALDNNKLRKESNIKKC CCCCCCHHHEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH IGYMLAASGFAVFFGGTFLDGLVAAVIAIAIFGMDHFFQIRKLNRVIYTVIACFLSGCLA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLCGHFGLCMNVDKVMIGDIMIFIPALILINGVKEIFYQDIMPGLYRLIEAFMIALSIAI HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFVGSMMLLGGIL HHHHHHHHHHCCC >Mature Secondary Structure MQAKYDKFQEYVLEIGRRMVMCGAEVRRVEDTIIRICNAYDIKVCNVYAITTLIIMTMKD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC SEGRHYTQSVRINSTATDLGQLEALNAMAREICSKVPPISEIGSALDNNKLRKESNIKKC CCCCCCHHHEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH IGYMLAASGFAVFFGGTFLDGLVAAVIAIAIFGMDHFFQIRKLNRVIYTVIACFLSGCLA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLCGHFGLCMNVDKVMIGDIMIFIPALILINGVKEIFYQDIMPGLYRLIEAFMIALSIAI HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFVGSMMLLGGIL HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA