Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
---|---|
Accession | NC_009495 |
Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148378713
Identifier: 148378713
GI number: 148378713
Start: 821889
End: 822596
Strand: Reverse
Name: 148378713
Synonym: CBO0713
Alternate gene names: NA
Gene position: 822596-821889 (Counterclockwise)
Preceding gene: 148378714
Following gene: 148378695
Centisome position: 21.16
GC content: 33.47
Gene sequence:
>708_bases ATGGCAATGTGGAATCCGTGGCGTGGCTGCCATAAATATAGCGAAGGATGTAAATACTGCTATATTCATAAAGGCGATAC CAAAAGAGGAGTAGACACAAATATTATTGTAAAAACAGATAATTTCAATGCACCTATTGCAAAGAATAAAAAAGGTGAGT ATAAAATTAAATCAGGTCAAACCGTGTATTTATGCTTTTCTACAGATTTTCTTATTGAAGAAGCTGACAAATGGAGAGAA GAATGTTGGAAAATGATAAGAGAACGCTCGGACTTGAATTTTATTTTTCTTACAAAAAGAATCGAAAGATTTTTAGAGTG TATTCCCAATGACTGGAACAATGGATATGATAATGTGACTGTTGGCTGCACTGTTGAAAATCAAGATAGAGCAGACTTTA GACTTTCTATATTTCAAAGCCTTCCAATAAAGCACAGGAATGTAATTTGCCAGCCACTTATTGAAGAGATAAATATAGAA AAATATCTAGATAATGTTGAATTGGTAGTAGTTGGTGGTGAATCTGATAGAAATGCAAGACCGCTGAATTACAATTGGGT TTTATCTATTCGAGAGCAGTGCATAACTAAAGGAGTTCCTTTTGAATTTAGGCAATGTGGAACTCACTTTATCAAAGATG GTAAGAAATACACACTTAATGTGAAAGATTTATGCAGTCAGGCAAGAAAAGCAAATATTAACTGTTAA
Upstream 100 bases:
>100_bases TTAAAAAAGGAGAATTAAGTATAGTACATTTGGAAGATGTAGTTGTTGGTACAAGCATTCCATATAATTATGATAAATCG AAATTTTAGGTGGTGTTGAT
Downstream 100 bases:
>100_bases TAACCTGTTTAAAGATATGCTACAGGGTATGAGTATAATGTGAAGTTATGTTAGTTGGCCTTCTTTAAATATGTATTAAG GGGGTATGTAGGTAGGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage /Gp; Gp37gp68 Family Protein; Bacteriophage Protein Gp; ABC Transporter Subunit; Phage ; ABC Transporter; Phage Protein Gp; Phage Protein; Phage Gp; LOW QUALITY PROTEIN Claudin Tight Junction Protein; Claudin Tight Junction Protein
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MAMWNPWRGCHKYSEGCKYCYIHKGDTKRGVDTNIIVKTDNFNAPIAKNKKGEYKIKSGQTVYLCFSTDFLIEEADKWRE ECWKMIRERSDLNFIFLTKRIERFLECIPNDWNNGYDNVTVGCTVENQDRADFRLSIFQSLPIKHRNVICQPLIEEINIE KYLDNVELVVVGGESDRNARPLNYNWVLSIREQCITKGVPFEFRQCGTHFIKDGKKYTLNVKDLCSQARKANINC
Sequences:
>Translated_235_residues MAMWNPWRGCHKYSEGCKYCYIHKGDTKRGVDTNIIVKTDNFNAPIAKNKKGEYKIKSGQTVYLCFSTDFLIEEADKWRE ECWKMIRERSDLNFIFLTKRIERFLECIPNDWNNGYDNVTVGCTVENQDRADFRLSIFQSLPIKHRNVICQPLIEEINIE KYLDNVELVVVGGESDRNARPLNYNWVLSIREQCITKGVPFEFRQCGTHFIKDGKKYTLNVKDLCSQARKANINC >Mature_234_residues AMWNPWRGCHKYSEGCKYCYIHKGDTKRGVDTNIIVKTDNFNAPIAKNKKGEYKIKSGQTVYLCFSTDFLIEEADKWREE CWKMIRERSDLNFIFLTKRIERFLECIPNDWNNGYDNVTVGCTVENQDRADFRLSIFQSLPIKHRNVICQPLIEEINIEK YLDNVELVVVGGESDRNARPLNYNWVLSIREQCITKGVPFEFRQCGTHFIKDGKKYTLNVKDLCSQARKANINC
Specific function: Unknown
COG id: COG4422
COG function: function code S; Bacteriophage protein gp37
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27544; Mature: 27413
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMWNPWRGCHKYSEGCKYCYIHKGDTKRGVDTNIIVKTDNFNAPIAKNKKGEYKIKSGQ CCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCC TVYLCFSTDFLIEEADKWREECWKMIRERSDLNFIFLTKRIERFLECIPNDWNNGYDNVT EEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCEE VGCTVENQDRADFRLSIFQSLPIKHRNVICQPLIEEINIEKYLDNVELVVVGGESDRNAR EEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCEEEEEECCCCCCCCC PLNYNWVLSIREQCITKGVPFEFRQCGTHFIKDGKKYTLNVKDLCSQARKANINC CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCC >Mature Secondary Structure AMWNPWRGCHKYSEGCKYCYIHKGDTKRGVDTNIIVKTDNFNAPIAKNKKGEYKIKSGQ CCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCC TVYLCFSTDFLIEEADKWREECWKMIRERSDLNFIFLTKRIERFLECIPNDWNNGYDNVT EEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCEE VGCTVENQDRADFRLSIFQSLPIKHRNVICQPLIEEINIEKYLDNVELVVVGGESDRNAR EEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCEEEEEECCCCCCCCC PLNYNWVLSIREQCITKGVPFEFRQCGTHFIKDGKKYTLNVKDLCSQARKANINC CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA