Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
---|---|
Accession | NC_009495 |
Length | 3,886,916 |
Click here to switch to the map view.
The map label for this gene is 148378695
Identifier: 148378695
GI number: 148378695
Start: 798433
End: 799842
Strand: Reverse
Name: 148378695
Synonym: CBO0695
Alternate gene names: NA
Gene position: 799842-798433 (Counterclockwise)
Preceding gene: 148378713
Following gene: 148378684
Centisome position: 20.58
GC content: 29.43
Gene sequence:
>1410_bases ATGAGAAAAAAAGATATACTTGAATTAAAAAAACGTTTTAAAAAAGACCACTGCACCTTCACTAAAATATGTGGTTGCTA TGTTAATGGTGAAAAAAATATTATTTTAAATTTTAGGGAATCCTTTTTAAATTTAGAGGAGGATGAGTATTTTAAGTACT TAGAAATTGCTAAAAAAGTCCTATCTGGAACCATCGGCAATAATATTTTAGAACTTAACTTTCCACTTAATGAGAATCTT GAAAATGAAAAACAACTTTCTCTTGTTAAGCTTAAAAAAAGCCAATTAAAAGACGATGCCCTGCTTCAAGATTTTTATAA ATCTATAATAGATAGTTATGATTATACTGGTAATTTTTTAATACTAGTTTTTCATGATGCTTATGATGTTATTACTAAAA CTACTGATAATTCTAAAATAGATGAATCTGAAGAAATATATGAGTATATTCTATGTGCAATATGTCCTGTTTCACTTTCA GATCCTGGACTTAGATACTTTGAAGAAGAAAAGAAAATAAAGGCACGTATTAGAGATTGGGTGGTGAATACTCCAACCCT TGGCTTTGTGTTCCCTGCTTTTATTGATCGTACTTCAGATGTTAATTCTGTTATGTACTACACTAAAAATGCAAAGGACC CACATCCTGAATTAATGGAAGAGGCTTTAGGTTGCTTCTCAAAACAAACTGCCACTATCCAAAAAGAAACCTTTCAAACA ATTATTAAAGATTCTATTAGTAGTGATGAAAAAAAAGCTGAGAAAACTTTTATAGAAATACAAGAAAACCTAAATACTAT GATAGATGAATACAATTCAATATATGATGATAAAGATGATGAACCTATAACCTTAAAACAAAAGGACATACAAAATCTTT TAATAGAAAGTGGGATTCCTGAAAAAGCTACCGCTAAAATTGAAAAATCTTATGTAGAAAGCTTTGGTGAAAACCTTCCT TTAGCAGAACATTTAATTGACTCAAAAGTACTTAAAGCAAGTGCTCAAAGGAAAAAGGAAGAACAGCTTGAAAAGCAAGT AGAAATTCTACAATATAGACTTGAAGAAGTAAAGAAAGAGTCAGCTATGGATAAGGAAGCTGATGTTTCTAAAAAGGATG ATGAGGATAATGTGATTTTAGATGACACTTTAGAAGATAATTTAGATGATGCCTTAGATGATGTTTCAAAAAATGATTTA AATGATTCCTTAGAAGATAATTTAGAAGAATCTCCGGCCATAGATTCAGCGGATAATAACCTTACTCCTGACTATGATGT TATACTTCAAGTAAAGCCTGAAAAAATACCTAAAATCAAATCTCAAATAATTGATGGTCAAAAATGTATAGTTATTCCTA TTGATGAGAATGAACAAACTACAGTCAATGGCTTAAATGATTTAATTTAA
Upstream 100 bases:
>100_bases TAACTAATAAAATCTTTAATTAATACGCAAAAAATATTATACTTAATAATATATTAATTAATATCTACAAATAGAAAGGA CTAGATTGAGGAGTTTATAT
Downstream 100 bases:
>100_bases GTTATATAAATTAATAAAACAGTGCCATCATTATATAATCTGGCACTGTTTTTATTTTATTTTTTGCTATCTATTTTTGT TAAATAATTTTTTGGTCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MRKKDILELKKRFKKDHCTFTKICGCYVNGEKNIILNFRESFLNLEEDEYFKYLEIAKKVLSGTIGNNILELNFPLNENL ENEKQLSLVKLKKSQLKDDALLQDFYKSIIDSYDYTGNFLILVFHDAYDVITKTTDNSKIDESEEIYEYILCAICPVSLS DPGLRYFEEEKKIKARIRDWVVNTPTLGFVFPAFIDRTSDVNSVMYYTKNAKDPHPELMEEALGCFSKQTATIQKETFQT IIKDSISSDEKKAEKTFIEIQENLNTMIDEYNSIYDDKDDEPITLKQKDIQNLLIESGIPEKATAKIEKSYVESFGENLP LAEHLIDSKVLKASAQRKKEEQLEKQVEILQYRLEEVKKESAMDKEADVSKKDDEDNVILDDTLEDNLDDALDDVSKNDL NDSLEDNLEESPAIDSADNNLTPDYDVILQVKPEKIPKIKSQIIDGQKCIVIPIDENEQTTVNGLNDLI
Sequences:
>Translated_469_residues MRKKDILELKKRFKKDHCTFTKICGCYVNGEKNIILNFRESFLNLEEDEYFKYLEIAKKVLSGTIGNNILELNFPLNENL ENEKQLSLVKLKKSQLKDDALLQDFYKSIIDSYDYTGNFLILVFHDAYDVITKTTDNSKIDESEEIYEYILCAICPVSLS DPGLRYFEEEKKIKARIRDWVVNTPTLGFVFPAFIDRTSDVNSVMYYTKNAKDPHPELMEEALGCFSKQTATIQKETFQT IIKDSISSDEKKAEKTFIEIQENLNTMIDEYNSIYDDKDDEPITLKQKDIQNLLIESGIPEKATAKIEKSYVESFGENLP LAEHLIDSKVLKASAQRKKEEQLEKQVEILQYRLEEVKKESAMDKEADVSKKDDEDNVILDDTLEDNLDDALDDVSKNDL NDSLEDNLEESPAIDSADNNLTPDYDVILQVKPEKIPKIKSQIIDGQKCIVIPIDENEQTTVNGLNDLI >Mature_469_residues MRKKDILELKKRFKKDHCTFTKICGCYVNGEKNIILNFRESFLNLEEDEYFKYLEIAKKVLSGTIGNNILELNFPLNENL ENEKQLSLVKLKKSQLKDDALLQDFYKSIIDSYDYTGNFLILVFHDAYDVITKTTDNSKIDESEEIYEYILCAICPVSLS DPGLRYFEEEKKIKARIRDWVVNTPTLGFVFPAFIDRTSDVNSVMYYTKNAKDPHPELMEEALGCFSKQTATIQKETFQT IIKDSISSDEKKAEKTFIEIQENLNTMIDEYNSIYDDKDDEPITLKQKDIQNLLIESGIPEKATAKIEKSYVESFGENLP LAEHLIDSKVLKASAQRKKEEQLEKQVEILQYRLEEVKKESAMDKEADVSKKDDEDNVILDDTLEDNLDDALDDVSKNDL NDSLEDNLEESPAIDSADNNLTPDYDVILQVKPEKIPKIKSQIIDGQKCIVIPIDENEQTTVNGLNDLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53951; Mature: 53951
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKDILELKKRFKKDHCTFTKICGCYVNGEKNIILNFRESFLNLEEDEYFKYLEIAKKV CCCHHHHHHHHHHHHCCCCHHHHHEEEECCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHH LSGTIGNNILELNFPLNENLENEKQLSLVKLKKSQLKDDALLQDFYKSIIDSYDYTGNFL HHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEE ILVFHDAYDVITKTTDNSKIDESEEIYEYILCAICPVSLSDPGLRYFEEEKKIKARIRDW EEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH VVNTPTLGFVFPAFIDRTSDVNSVMYYTKNAKDPHPELMEEALGCFSKQTATIQKETFQT HCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IIKDSISSDEKKAEKTFIEIQENLNTMIDEYNSIYDDKDDEPITLKQKDIQNLLIESGIP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCC EKATAKIEKSYVESFGENLPLAEHLIDSKVLKASAQRKKEEQLEKQVEILQYRLEEVKKE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAMDKEADVSKKDDEDNVILDDTLEDNLDDALDDVSKNDLNDSLEDNLEESPAIDSADNN HCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHCHHHCCCCCCCCCC LTPDYDVILQVKPEKIPKIKSQIIDGQKCIVIPIDENEQTTVNGLNDLI CCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCHHHCC >Mature Secondary Structure MRKKDILELKKRFKKDHCTFTKICGCYVNGEKNIILNFRESFLNLEEDEYFKYLEIAKKV CCCHHHHHHHHHHHHCCCCHHHHHEEEECCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHH LSGTIGNNILELNFPLNENLENEKQLSLVKLKKSQLKDDALLQDFYKSIIDSYDYTGNFL HHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEE ILVFHDAYDVITKTTDNSKIDESEEIYEYILCAICPVSLSDPGLRYFEEEKKIKARIRDW EEEEECHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH VVNTPTLGFVFPAFIDRTSDVNSVMYYTKNAKDPHPELMEEALGCFSKQTATIQKETFQT HCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IIKDSISSDEKKAEKTFIEIQENLNTMIDEYNSIYDDKDDEPITLKQKDIQNLLIESGIP HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHCCCC EKATAKIEKSYVESFGENLPLAEHLIDSKVLKASAQRKKEEQLEKQVEILQYRLEEVKKE HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAMDKEADVSKKDDEDNVILDDTLEDNLDDALDDVSKNDLNDSLEDNLEESPAIDSADNN HCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHCHHHCCCCCCCCCC LTPDYDVILQVKPEKIPKIKSQIIDGQKCIVIPIDENEQTTVNGLNDLI CCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA