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The map label for this gene is allC [H]

Identifier: 148378630

GI number: 148378630

Start: 728044

End: 729267

Strand: Reverse

Name: allC [H]

Synonym: CBO0629

Alternate gene names: 148378630

Gene position: 729267-728044 (Counterclockwise)

Preceding gene: 148378634

Following gene: 148378625

Centisome position: 18.76

GC content: 34.23

Gene sequence:

>1224_bases
ATGTTAAGTTGTAATAAAAAAAGATTAGAAGATAAAATTATTACCTTCAGTAAATTCGGCGCTACAGAAAATGGTGGAAT
AACAAGATTATCTTTATCAAAGCCAGCCATTCAAGCAAGAGTAGAATTTTCAAAAAGAATGAATGAACTAGGTGCAACTA
TAGCAACAGATGATATGGGAAATATGTATGCTACTTTCAAAGGATCTGAAGAAAACCTTCCCCATATTGCAATGGGATCG
CATTGTGATTCTGTAGTACAAGGTGGAAATTATGATGGTATTTTAGGGGTACTTACAGCAATGGAAGTAGCTGAAACTAT
AGTTACAGAAAAAATTTCCCATCGCCATCCAATTACAGTTATGATTTGGACTAATGAAGAAGGGGCTCGTTTTGACCCTG
CTATGATGTCCTCAGGTGTTATTACAGGTAAATTTGATAAATCAGAAATGCTAGATTCTAAAGATAAAAAGGGTATATCC
TTTGGTGAAGCACTAGATGCAAGCGGATACAAGGGTGAAGAAAAAAACAGAATAAATCCCAAAGATTATATGGCTCTCCT
AGAACTTCATATTGAACAAGGTCCAGTTCTAGAATCCTCAAAAATAGATATAGGTGTTGTAGAAGGCGTTGTTGGAATGG
TAAATTATGAATTTGAATTTATTGGTCAAGCCGGTCATGCTGGAACAGTTCCACAAAAAATGAGAAAGGATGCTCTTTTA
GCAGCTTCTGAAGCCATTCAATATTTGCATAAGGAACTTGATAAACTTCATGATAATTTAGTGTATACTACCGGTAGAAT
AATTTGTTTCCCTAATATACATACAATTATACCGGATAATGTTAAATTTACATTAGATGCAAGACATCAAGATGCAAAAG
TAATACGGCAAGTGGTTAAAATTATCGAAAATATCCCTAAAGAATTAGCAAATTGTAAAGTCACTTACAGGAAATTATGG
TCACGTAAAACTGTTAGTTTCAATAACCAATTGATTAATTTCGTGGAGAAAAATGCCAATCTTTACGGTTACTATAATAT
GAGAATGTACAGCGGTCCCGGCCATGATGCCCAATTTGCAGCAGACATGTTACCTACAACTATGATTTTCGTTCCAAGTA
TTGGCGGGCACAGTCATTGTGAAATAGAGAAAACACCACTTGATAATTGTTTAAAAGGAGCTAATGTGCTTCTACAAACA
ATTTTAGATATAGATGAAAAATAA

Upstream 100 bases:

>100_bases
TTTTAGTACGTTGTACACTATATATAAGAATAAATCTATAGTGGGGGTTTACTTCTTAGAATACATTCTCTCACTAAAAA
TAAAAGATGGGGTGTGTTGT

Downstream 100 bases:

>100_bases
ATATTAACTCATATGGAATCCCAGCAACAGCTTTATTATTACTGGGATTCCACATTTATATTAGTTAATTTTAAATTTTA
CTTATCTAATCCCCTTCTGT

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: Allantoate deiminase [H]

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MLSCNKKRLEDKIITFSKFGATENGGITRLSLSKPAIQARVEFSKRMNELGATIATDDMGNMYATFKGSEENLPHIAMGS
HCDSVVQGGNYDGILGVLTAMEVAETIVTEKISHRHPITVMIWTNEEGARFDPAMMSSGVITGKFDKSEMLDSKDKKGIS
FGEALDASGYKGEEKNRINPKDYMALLELHIEQGPVLESSKIDIGVVEGVVGMVNYEFEFIGQAGHAGTVPQKMRKDALL
AASEAIQYLHKELDKLHDNLVYTTGRIICFPNIHTIIPDNVKFTLDARHQDAKVIRQVVKIIENIPKELANCKVTYRKLW
SRKTVSFNNQLINFVEKNANLYGYYNMRMYSGPGHDAQFAADMLPTTMIFVPSIGGHSHCEIEKTPLDNCLKGANVLLQT
ILDIDEK

Sequences:

>Translated_407_residues
MLSCNKKRLEDKIITFSKFGATENGGITRLSLSKPAIQARVEFSKRMNELGATIATDDMGNMYATFKGSEENLPHIAMGS
HCDSVVQGGNYDGILGVLTAMEVAETIVTEKISHRHPITVMIWTNEEGARFDPAMMSSGVITGKFDKSEMLDSKDKKGIS
FGEALDASGYKGEEKNRINPKDYMALLELHIEQGPVLESSKIDIGVVEGVVGMVNYEFEFIGQAGHAGTVPQKMRKDALL
AASEAIQYLHKELDKLHDNLVYTTGRIICFPNIHTIIPDNVKFTLDARHQDAKVIRQVVKIIENIPKELANCKVTYRKLW
SRKTVSFNNQLINFVEKNANLYGYYNMRMYSGPGHDAQFAADMLPTTMIFVPSIGGHSHCEIEKTPLDNCLKGANVLLQT
ILDIDEK
>Mature_407_residues
MLSCNKKRLEDKIITFSKFGATENGGITRLSLSKPAIQARVEFSKRMNELGATIATDDMGNMYATFKGSEENLPHIAMGS
HCDSVVQGGNYDGILGVLTAMEVAETIVTEKISHRHPITVMIWTNEEGARFDPAMMSSGVITGKFDKSEMLDSKDKKGIS
FGEALDASGYKGEEKNRINPKDYMALLELHIEQGPVLESSKIDIGVVEGVVGMVNYEFEFIGQAGHAGTVPQKMRKDALL
AASEAIQYLHKELDKLHDNLVYTTGRIICFPNIHTIIPDNVKFTLDARHQDAKVIRQVVKIIENIPKELANCKVTYRKLW
SRKTVSFNNQLINFVEKNANLYGYYNMRMYSGPGHDAQFAADMLPTTMIFVPSIGGHSHCEIEKTPLDNCLKGANVLLQT
ILDIDEK

Specific function: Involved in the anaerobic utilization of allantoin. Converts allantoate to (S)-ureidoglycolate and ammonia [H]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=400, Percent_Identity=32.75, Blast_Score=214, Evalue=7e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017591
- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.5.3.- [C]

Molecular weight: Translated: 45240; Mature: 45240

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSCNKKRLEDKIITFSKFGATENGGITRLSLSKPAIQARVEFSKRMNELGATIATDDMG
CCCCCHHHHHHHHEEEHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCC
NMYATFKGSEENLPHIAMGSHCDSVVQGGNYDGILGVLTAMEVAETIVTEKISHRHPITV
CEEEEEECCCCCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
MIWTNEEGARFDPAMMSSGVITGKFDKSEMLDSKDKKGISFGEALDASGYKGEEKNRINP
EEEECCCCCCCCHHHHHCCCEEECCCHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCH
KDYMALLELHIEQGPVLESSKIDIGVVEGVVGMVNYEFEFIGQAGHAGTVPQKMRKDALL
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHH
AASEAIQYLHKELDKLHDNLVYTTGRIICFPNIHTIIPDNVKFTLDARHQDAKVIRQVVK
HHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCCEECCCCEEEEEECCCCHHHHHHHHHH
IIENIPKELANCKVTYRKLWSRKTVSFNNQLINFVEKNANLYGYYNMRMYSGPGHDAQFA
HHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHH
ADMLPTTMIFVPSIGGHSHCEIEKTPLDNCLKGANVLLQTILDIDEK
HHHCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLSCNKKRLEDKIITFSKFGATENGGITRLSLSKPAIQARVEFSKRMNELGATIATDDMG
CCCCCHHHHHHHHEEEHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCEEEECCCC
NMYATFKGSEENLPHIAMGSHCDSVVQGGNYDGILGVLTAMEVAETIVTEKISHRHPITV
CEEEEEECCCCCCCEEEECCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
MIWTNEEGARFDPAMMSSGVITGKFDKSEMLDSKDKKGISFGEALDASGYKGEEKNRINP
EEEECCCCCCCCHHHHHCCCEEECCCHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCH
KDYMALLELHIEQGPVLESSKIDIGVVEGVVGMVNYEFEFIGQAGHAGTVPQKMRKDALL
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHHH
AASEAIQYLHKELDKLHDNLVYTTGRIICFPNIHTIIPDNVKFTLDARHQDAKVIRQVVK
HHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCCEECCCCEEEEEECCCCHHHHHHHHHH
IIENIPKELANCKVTYRKLWSRKTVSFNNQLINFVEKNANLYGYYNMRMYSGPGHDAQFA
HHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCCHHHH
ADMLPTTMIFVPSIGGHSHCEIEKTPLDNCLKGANVLLQTILDIDEK
HHHCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10601204; 9278503 [H]