Click here to switch to the map view.

The map label for this gene is srpC [H]

Identifier: 148378535

GI number: 148378535

Start: 631279

End: 631815

Strand: Reverse

Name: srpC [H]

Synonym: CBO0533

Alternate gene names: 148378535

Gene position: 631815-631279 (Counterclockwise)

Preceding gene: 148378536

Following gene: 148378534

Centisome position: 16.25

GC content: 30.17

Gene sequence:

>537_bases
ATGAAAGCATTACTAGAATTATTTTTTTCTTTCTTAAAAATAGGTATGTTTAGTTTTGGTGGTGGTTATGCTATGCTCCC
ACTTATAGAAAGAGAGATTGTACACAATAAGCATTGGATAAATTATAAGTCTTTTATAGACATTATAGGTATATCTCAAA
TGACACCCGGCCCTATAGCTATAAACTCTGCCACCTTTGTAGGATATAAGGTAGCTGGATTCAAGGGAAGCTTAGTGGCT
ACCTTAGGGGTTATAACCTTCTCTTTTATTTTGGTAACAATAGCAACCCATTTTATTATAAAGTTTAAAGAATCAAATAT
TTTAAAATCAGCTTTAATGGGAATGAGACCCGCTCTTATAGGTCTTATAATATATGCTTTTTTAAACCTAGCCTCCCAAT
CTTATGTAGATTTAAAAAGTATAATAATAGGAATAATAACCTTTATACTTTTATTGTCTAAAAAGATACATCCTATCCTA
ATCATAGTAATATCTGGACTTTTAGGAATAATTTTTTATGGGCTTATTCCCTTTTAA

Upstream 100 bases:

>100_bases
TAACAGTGGTACTTTTAAAATTTTTTAATATGCACCCTGTTATAATTATACTTCTTTCTGGAATATATGGTTATATTTTT
CTTAGAAAGAGGGTGAAGTA

Downstream 100 bases:

>100_bases
AATATTTAAATAAATATTGTACTTAATAACACAATATGCTATAATTTGAAATGTCATGAAGACAAGGGGGAGTAGCAAAA
GTTAAGTACTTTAAACTATT

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKALLELFFSFLKIGMFSFGGGYAMLPLIEREIVHNKHWINYKSFIDIIGISQMTPGPIAINSATFVGYKVAGFKGSLVA
TLGVITFSFILVTIATHFIIKFKESNILKSALMGMRPALIGLIIYAFLNLASQSYVDLKSIIIGIITFILLLSKKIHPIL
IIVISGLLGIIFYGLIPF

Sequences:

>Translated_178_residues
MKALLELFFSFLKIGMFSFGGGYAMLPLIEREIVHNKHWINYKSFIDIIGISQMTPGPIAINSATFVGYKVAGFKGSLVA
TLGVITFSFILVTIATHFIIKFKESNILKSALMGMRPALIGLIIYAFLNLASQSYVDLKSIIIGIITFILLLSKKIHPIL
IIVISGLLGIIFYGLIPF
>Mature_178_residues
MKALLELFFSFLKIGMFSFGGGYAMLPLIEREIVHNKHWINYKSFIDIIGISQMTPGPIAINSATFVGYKVAGFKGSLVA
TLGVITFSFILVTIATHFIIKFKESNILKSALMGMRPALIGLIIYAFLNLASQSYVDLKSIIIGIITFILLLSKKIHPIL
IIVISGLLGIIFYGLIPF

Specific function: May function in the active transport of chromate into the cell under sulfur-deficient conditions [H]

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370
- InterPro:   IPR014047 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 19632; Mature: 19632

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALLELFFSFLKIGMFSFGGGYAMLPLIEREIVHNKHWINYKSFIDIIGISQMTPGPIA
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEE
INSATFVGYKVAGFKGSLVATLGVITFSFILVTIATHFIIKFKESNILKSALMGMRPALI
ECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GLIIYAFLNLASQSYVDLKSIIIGIITFILLLSKKIHPILIIVISGLLGIIFYGLIPF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKALLELFFSFLKIGMFSFGGGYAMLPLIEREIVHNKHWINYKSFIDIIGISQMTPGPIA
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEE
INSATFVGYKVAGFKGSLVATLGVITFSFILVTIATHFIIKFKESNILKSALMGMRPALI
ECCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
GLIIYAFLNLASQSYVDLKSIIIGIITFILLLSKKIHPILIIVISGLLGIIFYGLIPF
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7536734 [H]