Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is ywrA [H]
Identifier: 148378536
GI number: 148378536
Start: 631815
End: 632351
Strand: Reverse
Name: ywrA [H]
Synonym: CBO0534
Alternate gene names: 148378536
Gene position: 632351-631815 (Counterclockwise)
Preceding gene: 148378539
Following gene: 148378535
Centisome position: 16.27
GC content: 28.68
Gene sequence:
>537_bases ATGCTTAAATATCTAAAAATGTTTTGGAGTTTCTTTAAAATAGGTGCCTTTACCTTTGGTGGAGGCTATGCAATGATTCC ACTTATAGAGGAAGAGGTTGTAAATAAAAACTCTTGGATATCTAAAGAAGACTTCTTAGATATACTTGTAATATCCCAAT CCTTTCCTGGTGCTTTAGCCGTAAATTGTTCTACTTTTATCGGATATAAAATAAATAATTTACCTGGAGCTATACTTGCT CTTTTAGGAACCATCTTACCATCCTTCTTTATAATATTATGTATTGCAAGCTTTTTTATGCAATTTAGAAATAATTATTA TGTAGATTTAATATTCAAAGGGATAAATGGAGCCGTCCCTGTACTAGTGTTAGTAGCCGTAATAAGCCTTTCTAAATCTA TAAAAAAAAATTACATTAATTATACCATAATTATATTAACAGTGGTACTTTTAAAATTTTTTAATATGCACCCTGTTATA ATTATACTTCTTTCTGGAATATATGGTTATATTTTTCTTAGAAAGAGGGTGAAGTAA
Upstream 100 bases:
>100_bases ATCTATCATTTACCTACTTTATTTATATTATTCTATTAGAAAATATAGTATTCATAGGTTATAATTAATTTATCTTTTAT TTTTTTATGAGGTGATATTA
Downstream 100 bases:
>100_bases TGAAAGCATTACTAGAATTATTTTTTTCTTTCTTAAAAATAGGTATGTTTAGTTTTGGTGGTGGTTATGCTATGCTCCCA CTTATAGAAAGAGAGATTGT
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MLKYLKMFWSFFKIGAFTFGGGYAMIPLIEEEVVNKNSWISKEDFLDILVISQSFPGALAVNCSTFIGYKINNLPGAILA LLGTILPSFFIILCIASFFMQFRNNYYVDLIFKGINGAVPVLVLVAVISLSKSIKKNYINYTIIILTVVLLKFFNMHPVI IILLSGIYGYIFLRKRVK
Sequences:
>Translated_178_residues MLKYLKMFWSFFKIGAFTFGGGYAMIPLIEEEVVNKNSWISKEDFLDILVISQSFPGALAVNCSTFIGYKINNLPGAILA LLGTILPSFFIILCIASFFMQFRNNYYVDLIFKGINGAVPVLVLVAVISLSKSIKKNYINYTIIILTVVLLKFFNMHPVI IILLSGIYGYIFLRKRVK >Mature_178_residues MLKYLKMFWSFFKIGAFTFGGGYAMIPLIEEEVVNKNSWISKEDFLDILVISQSFPGALAVNCSTFIGYKINNLPGAILA LLGTILPSFFIILCIASFFMQFRNNYYVDLIFKGINGAVPVLVLVAVISLSKSIKKNYINYTIIILTVVLLKFFNMHPVI IILLSGIYGYIFLRKRVK
Specific function: Unknown
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 20146; Mature: 20146
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKYLKMFWSFFKIGAFTFGGGYAMIPLIEEEVVNKNSWISKEDFLDILVISQSFPGALA CHHHHHHHHHHHHHHHEEECCCEEEHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCCEEE VNCSTFIGYKINNLPGAILALLGTILPSFFIILCIASFFMQFRNNYYVDLIFKGINGAVP EEHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHH VLVLVAVISLSKSIKKNYINYTIIILTVVLLKFFNMHPVIIILLSGIYGYIFLRKRVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKYLKMFWSFFKIGAFTFGGGYAMIPLIEEEVVNKNSWISKEDFLDILVISQSFPGALA CHHHHHHHHHHHHHHHEEECCCEEEHHHHHHHHCCCCCCCCHHHHHHHEEECCCCCCEEE VNCSTFIGYKINNLPGAILALLGTILPSFFIILCIASFFMQFRNNYYVDLIFKGINGAVP EEHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHH VLVLVAVISLSKSIKKNYINYTIIILTVVLLKFFNMHPVIIILLSGIYGYIFLRKRVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]