Click here to switch to the map view.

The map label for this gene is 148359500

Identifier: 148359500

GI number: 148359500

Start: 2270054

End: 2271097

Strand: Reverse

Name: 148359500

Synonym: LPC_1410

Alternate gene names: NA

Gene position: 2271097-2270054 (Counterclockwise)

Preceding gene: 148359502

Following gene: 148359499

Centisome position: 63.5

GC content: 35.73

Gene sequence:

>1044_bases
ATGGCATATCATCAACTCAGCTATACTTTTTTGAACCACCAAAAATTACCTTTAATTATTCAGCCTCAAGCTAAAGCGGA
AGGTAATATTGATGTTTTAAAACAATTTCTTAAAGAAGAAAATGCCCTGTTTAAGGAGCAACTCCTCAATTATGGCGCCA
TTATCTTACGTGGGTTTCATGTTAATACGGCTGAACAATTTTTAGAAGTGATCCAGTCAAGTGATTTGGGGCCAAATTAT
TCTTATGATTTTTGCCCGATTCCGCGAACACAAATTAGAGAAAATATTTATACTTCGATAAATATCCATCCGAGTTTTAA
TCTTGCTTTACATAATGAAAAATCATATGACCAGGATTTTCCCAGCCACATTTTTTTTAACTGCATTCATGCCCCGCAAA
CAGGCGGAGATACTGCATTGGCTGATGGAAACAAGATATGGTTTTCTTTACCAAAGTTTTTACAAAAAAAATTGCAATCT
AAAGGAATATTATATCGAAGGCATTATTACGGTTCTGGAATACAGTACAAAATACTTCGATCAATAGGCAAAAATTCTGG
GTGCATGACATGGATGGAGCGATTCCAAACGGATGACCAAAATAAAGTGGAAGTGATGCTTCAGAAAATGGGTGTGCAAT
TTCGATGGATTCAAGGCAATGGGCTAATCATAGAACAATTGCTTCCTGCCTGCCGGAATCATCCGATCAGCGGAAAACTA
GTCTGGTTTAATCAAAGTAACCATGCTAATCATTATTATAATGGAACCAGTGATTACATCAAAAGTAAGATTAATAACAC
TTTTTCTCGTTTTATCTTGTTACATAAATATTTTCATCCTTATATTGCCTTTTATGGCGACGGTGAACCTTTATCGAAGC
AAGAAGCAGATTGCATAAACTCTGCAATACAAAAAAATACGGTATCCACAGCCTGGCAACCAGGGGATGTTATGATAGTT
GATAATTTTTCCTGCTTGCATGGAAAAACACCCCATACAGGAAACCGATTAATCTTGGTTGGATTGACAAAATATTTTGA
TTAA

Upstream 100 bases:

>100_bases
TTGTAATATAGGTGAAAAGAGGGAGCCACTTATAGAATCAGGAAGGACCTACACTCTGAAAGTCTGATAGTACACCTCCG
GATTGTCAGTGAGGAATTTT

Downstream 100 bases:

>100_bases
AGGGACCCATACCAATGCCTGATGATATTTCACGAAAACAATTTAGTATTGGAGATTTGTATTTTACTAATGAATTGGAA
GTCAGTGGTTTGATTTATGA

Product: pyoverdine biosynthesis regulatory gene SyrP- like protein

Products: NA

Alternate protein names: SyrP Protein; SyrP-Like Protein; Non-Ribosomal Peptide Synthetase; Regulatory Protein B; Regulatory Protein; Amino Acid Adenylation Domain Protein; Taurine Catabolism Dioxygenase TauD/TfdA Family; Pyoverdine Biosynthesis Regulatory Gene; Amino Acid Adenylation Domain-Containing Protein; Condensation Domain-Containing Protein; Taurine Catabolism Dioxygenase TauD TfdA Family; Syrp Like Protein Albicidin Biosynthesis Regulation; Taurine Catabolism Dioxygenase Taud/Tfda; SyrP-Like Regulatory Protein; Regulatory Protein SyrP-Like; NRPS-Like Protein; Syringomycin Biosynthesis ; Pyoverdine Biosynthesis Regulatory Protein SyrP-Like; Peptide Synthase; Syringomycin Biosynthesis; Oxidoreductase; Clavaminic Acid Synthetase-Like Protein; Pyoverdine Biosynthesis Regulatory Gene SyrP-Like; Syringomycin Synthesis Regulator SyrP; Non Ribosomal Peptide Synthase Antibiotic Synthesis; Multi-Domain Non-Ribosomal Peptide Synthetase

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MAYHQLSYTFLNHQKLPLIIQPQAKAEGNIDVLKQFLKEENALFKEQLLNYGAIILRGFHVNTAEQFLEVIQSSDLGPNY
SYDFCPIPRTQIRENIYTSINIHPSFNLALHNEKSYDQDFPSHIFFNCIHAPQTGGDTALADGNKIWFSLPKFLQKKLQS
KGILYRRHYYGSGIQYKILRSIGKNSGCMTWMERFQTDDQNKVEVMLQKMGVQFRWIQGNGLIIEQLLPACRNHPISGKL
VWFNQSNHANHYYNGTSDYIKSKINNTFSRFILLHKYFHPYIAFYGDGEPLSKQEADCINSAIQKNTVSTAWQPGDVMIV
DNFSCLHGKTPHTGNRLILVGLTKYFD

Sequences:

>Translated_347_residues
MAYHQLSYTFLNHQKLPLIIQPQAKAEGNIDVLKQFLKEENALFKEQLLNYGAIILRGFHVNTAEQFLEVIQSSDLGPNY
SYDFCPIPRTQIRENIYTSINIHPSFNLALHNEKSYDQDFPSHIFFNCIHAPQTGGDTALADGNKIWFSLPKFLQKKLQS
KGILYRRHYYGSGIQYKILRSIGKNSGCMTWMERFQTDDQNKVEVMLQKMGVQFRWIQGNGLIIEQLLPACRNHPISGKL
VWFNQSNHANHYYNGTSDYIKSKINNTFSRFILLHKYFHPYIAFYGDGEPLSKQEADCINSAIQKNTVSTAWQPGDVMIV
DNFSCLHGKTPHTGNRLILVGLTKYFD
>Mature_346_residues
AYHQLSYTFLNHQKLPLIIQPQAKAEGNIDVLKQFLKEENALFKEQLLNYGAIILRGFHVNTAEQFLEVIQSSDLGPNYS
YDFCPIPRTQIRENIYTSINIHPSFNLALHNEKSYDQDFPSHIFFNCIHAPQTGGDTALADGNKIWFSLPKFLQKKLQSK
GILYRRHYYGSGIQYKILRSIGKNSGCMTWMERFQTDDQNKVEVMLQKMGVQFRWIQGNGLIIEQLLPACRNHPISGKLV
WFNQSNHANHYYNGTSDYIKSKINNTFSRFILLHKYFHPYIAFYGDGEPLSKQEADCINSAIQKNTVSTAWQPGDVMIVD
NFSCLHGKTPHTGNRLILVGLTKYFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39998; Mature: 39867

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYHQLSYTFLNHQKLPLIIQPQAKAEGNIDVLKQFLKEENALFKEQLLNYGAIILRGFH
CCCEEEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
VNTAEQFLEVIQSSDLGPNYSYDFCPIPRTQIRENIYTSINIHPSFNLALHNEKSYDQDF
CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCEEEEECCCCCCCCCC
PSHIFFNCIHAPQTGGDTALADGNKIWFSLPKFLQKKLQSKGILYRRHYYGSGIQYKILR
CHHHHHEEECCCCCCCCCEEECCCEEEEHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHH
SIGKNSGCMTWMERFQTDDQNKVEVMLQKMGVQFRWIQGNGLIIEQLLPACRNHPISGKL
HHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCEEHHHHHHHHHCCCCCCEE
VWFNQSNHANHYYNGTSDYIKSKINNTFSRFILLHKYFHPYIAFYGDGEPLSKQEADCIN
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHH
SAIQKNTVSTAWQPGDVMIVDNFSCLHGKTPHTGNRLILVGLTKYFD
HHHHHCCCCCCCCCCCEEEEECCHHHCCCCCCCCCEEEEEEEHHHCC
>Mature Secondary Structure 
AYHQLSYTFLNHQKLPLIIQPQAKAEGNIDVLKQFLKEENALFKEQLLNYGAIILRGFH
CCEEEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC
VNTAEQFLEVIQSSDLGPNYSYDFCPIPRTQIRENIYTSINIHPSFNLALHNEKSYDQDF
CCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCEEEEECCCCCCCCCC
PSHIFFNCIHAPQTGGDTALADGNKIWFSLPKFLQKKLQSKGILYRRHYYGSGIQYKILR
CHHHHHEEECCCCCCCCCEEECCCEEEEHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHH
SIGKNSGCMTWMERFQTDDQNKVEVMLQKMGVQFRWIQGNGLIIEQLLPACRNHPISGKL
HHCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCEEHHHHHHHHHCCCCCCEE
VWFNQSNHANHYYNGTSDYIKSKINNTFSRFILLHKYFHPYIAFYGDGEPLSKQEADCIN
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHH
SAIQKNTVSTAWQPGDVMIVDNFSCLHGKTPHTGNRLILVGLTKYFD
HHHHHCCCCCCCCCCCEEEEECCHHHCCCCCCCCCEEEEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA