Definition | Legionella pneumophila str. Corby chromosome, complete genome. |
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Accession | NC_009494 |
Length | 3,576,470 |
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The map label for this gene is gltX [H]
Identifier: 148359458
GI number: 148359458
Start: 2222279
End: 2223691
Strand: Reverse
Name: gltX [H]
Synonym: LPC_1365
Alternate gene names: 148359458
Gene position: 2223691-2222279 (Counterclockwise)
Preceding gene: 148359461
Following gene: 148359457
Centisome position: 62.18
GC content: 41.12
Gene sequence:
>1413_bases ATGACTGTTAGAACCCGATTTGCCCCAAGCCCTACTGGTTTTTTACACGTTGGTGGGGTAAGGACTGCATTATTTTCATG GCTATATGCAAAACATCACAATGGGCAATTTATACTGCGTATAGAAGATACAGACAGAGAGCGTTCAACTCAAGAATCTG TACAGGCTATTTTAGACGGAATGGCCTGGTTAGGGCTTAACTTCGATGAAGGTCCCTATTATCAGACTGAGCGATATGCT CGTTATCAACAAGTAGCGCAGCAACTTTTGAAAGAAGGAAAAGCTTATCGCTGTCAATGCAGTAAGGAGAGACTGGAAGC TTTAAGAGAGGCTCAATTAGCCGCCAAGGAAAAGCCACGCTATGATGGGCATTGCAGAAACCAAACTCTTCCTGATAGTG GAGTTCCTTATGTTATTCGCTTTAGAAATCCTGATGCGGGTATAGTGTCTTTCCACGATGAGGTTTATGGTGACATTCAT GTGGATAATAGCGAACTGGATGATTTGATTTTGGTTCGTTCTGATGGGCACCCCACCTATAATTTTGCTGTAGTTATCGA TGATTGGGATATGAAAATAACCCATGTTATTCGCGGGGATGATCATATCAACAATACTCCGAGACAAATTAATTTATTCA AGGCATTGGATGCGCCAGTACCTGTTTTTGCCCATTTGCCCATGATTTTGGGTGAAGATGGCAAACGGTTGTCAAAGCGA CATGGTGCAGTAAGTGTCTTGCAGTTCAAGGAGCTGGGTGTATTGCCTCATGCTTTATTGAATTATTTAGTTCGTTTAGG ATGGTCTCATGGCGATCAGGAAATTTTTAGTGTACAAGAAATGATAACCAGCTTTGACTTGAAAAATGTCAGTCGAGGCG TCTCAAGTTTCAATTATGATAAGTTGTATTGGTTGAATCAGCATTATCAAAAAAGTGACTCTCCAGAATCAGTTGCCAAT GCGTTGCAATGGCATTTTGAGCAGGCAGGAATTGATTTGAATCAAGGTCCCGATTTGAAGGATTTGGTCGCAGTTCAGGC AGAGAGATGTAAGTCATTAGCAGAAATGTGTCAAATTAGTCAGTATTTTTATACAGATACCATTGAATATAATGAAGATG CTGTTAAAAAACACTTGCGGCCAGTTGTTCTGGAGCCTTTAATGGTATTACATGAGCGCCTAAAAGCGCTTGACGAATGG AAAAATGATAAAATTCAAGAATGCATTAATGATGTGAGCCTGCAATTTGATTTGAATTTAGGCAAAATCGCTCAACCGTT GCGTGTCGCCGTGACCGGATCCGGAACATCTCCTTCCATTGACATGACATTGGCTTTGTTAGGTAAAAACAAATCAATCA AACGTCTTGAAGACGCTTTGGAGAAAATACGAGCCAGAGCCAGTGCTGTTTAG
Upstream 100 bases:
>100_bases ATAGCTCCTTTTAGTCTTAATTCAGCAGTTGAATCTTTGCGTTCATGGTAAACTCGGCTATTATAACTTGATTATTTTAT TCCTTACAATGGAAGATATT
Downstream 100 bases:
>100_bases AATCTAAATATTTATTGATTTTAAGCTGAACGCAAAAAGATCTGTATTTTGAGAAGTATTCATATTTCAAGTGGGCAATG AAAACTACAATTTCGTTGGA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MTVRTRFAPSPTGFLHVGGVRTALFSWLYAKHHNGQFILRIEDTDRERSTQESVQAILDGMAWLGLNFDEGPYYQTERYA RYQQVAQQLLKEGKAYRCQCSKERLEALREAQLAAKEKPRYDGHCRNQTLPDSGVPYVIRFRNPDAGIVSFHDEVYGDIH VDNSELDDLILVRSDGHPTYNFAVVIDDWDMKITHVIRGDDHINNTPRQINLFKALDAPVPVFAHLPMILGEDGKRLSKR HGAVSVLQFKELGVLPHALLNYLVRLGWSHGDQEIFSVQEMITSFDLKNVSRGVSSFNYDKLYWLNQHYQKSDSPESVAN ALQWHFEQAGIDLNQGPDLKDLVAVQAERCKSLAEMCQISQYFYTDTIEYNEDAVKKHLRPVVLEPLMVLHERLKALDEW KNDKIQECINDVSLQFDLNLGKIAQPLRVAVTGSGTSPSIDMTLALLGKNKSIKRLEDALEKIRARASAV
Sequences:
>Translated_470_residues MTVRTRFAPSPTGFLHVGGVRTALFSWLYAKHHNGQFILRIEDTDRERSTQESVQAILDGMAWLGLNFDEGPYYQTERYA RYQQVAQQLLKEGKAYRCQCSKERLEALREAQLAAKEKPRYDGHCRNQTLPDSGVPYVIRFRNPDAGIVSFHDEVYGDIH VDNSELDDLILVRSDGHPTYNFAVVIDDWDMKITHVIRGDDHINNTPRQINLFKALDAPVPVFAHLPMILGEDGKRLSKR HGAVSVLQFKELGVLPHALLNYLVRLGWSHGDQEIFSVQEMITSFDLKNVSRGVSSFNYDKLYWLNQHYQKSDSPESVAN ALQWHFEQAGIDLNQGPDLKDLVAVQAERCKSLAEMCQISQYFYTDTIEYNEDAVKKHLRPVVLEPLMVLHERLKALDEW KNDKIQECINDVSLQFDLNLGKIAQPLRVAVTGSGTSPSIDMTLALLGKNKSIKRLEDALEKIRARASAV >Mature_469_residues TVRTRFAPSPTGFLHVGGVRTALFSWLYAKHHNGQFILRIEDTDRERSTQESVQAILDGMAWLGLNFDEGPYYQTERYAR YQQVAQQLLKEGKAYRCQCSKERLEALREAQLAAKEKPRYDGHCRNQTLPDSGVPYVIRFRNPDAGIVSFHDEVYGDIHV DNSELDDLILVRSDGHPTYNFAVVIDDWDMKITHVIRGDDHINNTPRQINLFKALDAPVPVFAHLPMILGEDGKRLSKRH GAVSVLQFKELGVLPHALLNYLVRLGWSHGDQEIFSVQEMITSFDLKNVSRGVSSFNYDKLYWLNQHYQKSDSPESVANA LQWHFEQAGIDLNQGPDLKDLVAVQAERCKSLAEMCQISQYFYTDTIEYNEDAVKKHLRPVVLEPLMVLHERLKALDEWK NDKIQECINDVSLQFDLNLGKIAQPLRVAVTGSGTSPSIDMTLALLGKNKSIKRLEDALEKIRARASAV
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=491, Percent_Identity=34.0122199592668, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI4826960, Length=108, Percent_Identity=37.037037037037, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI62241042, Length=212, Percent_Identity=24.5283018867925, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI1788743, Length=467, Percent_Identity=59.3147751605996, Blast_Score=598, Evalue=1e-172, Organism=Escherichia coli, GI226510925, Length=280, Percent_Identity=33.5714285714286, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1786895, Length=108, Percent_Identity=29.6296296296296, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71993394, Length=481, Percent_Identity=34.5114345114345, Blast_Score=233, Evalue=1e-61, Organism=Saccharomyces cerevisiae, GI6324540, Length=500, Percent_Identity=33.6, Blast_Score=265, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6324742, Length=220, Percent_Identity=28.1818181818182, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6321192, Length=208, Percent_Identity=25.4807692307692, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24665321, Length=491, Percent_Identity=31.9755600814664, Blast_Score=259, Evalue=4e-69,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 53533; Mature: 53402
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRTRFAPSPTGFLHVGGVRTALFSWLYAKHHNGQFILRIEDTDRERSTQESVQAILDG CCCCCCCCCCCCCEEEECHHHHHHHHHHHHEECCCEEEEEEECCCCCHHHHHHHHHHHHH MAWLGLNFDEGPYYQTERYARYQQVAQQLLKEGKAYRCQCSKERLEALREAQLAAKEKPR HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCC YDGHCRNQTLPDSGVPYVIRFRNPDAGIVSFHDEVYGDIHVDNSELDDLILVRSDGHPTY CCCCCCCCCCCCCCCCEEEEEECCCCCEEEECHHHCCEEEECCCCCCCEEEEECCCCCCE NFAVVIDDWDMKITHVIRGDDHINNTPRQINLFKALDAPVPVFAHLPMILGEDGKRLSKR EEEEEEECCCCEEEEEEECCCCCCCCCCCEEHHHHCCCCCCHHHHCHHHCCCCCHHHHHH HGAVSVLQFKELGVLPHALLNYLVRLGWSHGDQEIFSVQEMITSFDLKNVSRGVSSFNYD CCCEEEEHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KLYWLNQHYQKSDSPESVANALQWHFEQAGIDLNQGPDLKDLVAVQAERCKSLAEMCQIS EEEEECHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QYFYTDTIEYNEDAVKKHLRPVVLEPLMVLHERLKALDEWKNDKIQECINDVSLQFDLNL HHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEECCH GKIAQPLRVAVTGSGTSPSIDMTLALLGKNKSIKRLEDALEKIRARASAV HHHCCCEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TVRTRFAPSPTGFLHVGGVRTALFSWLYAKHHNGQFILRIEDTDRERSTQESVQAILDG CCCCCCCCCCCCEEEECHHHHHHHHHHHHEECCCEEEEEEECCCCCHHHHHHHHHHHHH MAWLGLNFDEGPYYQTERYARYQQVAQQLLKEGKAYRCQCSKERLEALREAQLAAKEKPR HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCC YDGHCRNQTLPDSGVPYVIRFRNPDAGIVSFHDEVYGDIHVDNSELDDLILVRSDGHPTY CCCCCCCCCCCCCCCCEEEEEECCCCCEEEECHHHCCEEEECCCCCCCEEEEECCCCCCE NFAVVIDDWDMKITHVIRGDDHINNTPRQINLFKALDAPVPVFAHLPMILGEDGKRLSKR EEEEEEECCCCEEEEEEECCCCCCCCCCCEEHHHHCCCCCCHHHHCHHHCCCCCHHHHHH HGAVSVLQFKELGVLPHALLNYLVRLGWSHGDQEIFSVQEMITSFDLKNVSRGVSSFNYD CCCEEEEHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KLYWLNQHYQKSDSPESVANALQWHFEQAGIDLNQGPDLKDLVAVQAERCKSLAEMCQIS EEEEECHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QYFYTDTIEYNEDAVKKHLRPVVLEPLMVLHERLKALDEWKNDKIQECINDVSLQFDLNL HHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEECCH GKIAQPLRVAVTGSGTSPSIDMTLALLGKNKSIKRLEDALEKIRARASAV HHHCCCEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA