Click here to switch to the map view.

The map label for this gene is 148359398

Identifier: 148359398

GI number: 148359398

Start: 2153391

End: 2154053

Strand: Reverse

Name: 148359398

Synonym: LPC_1296

Alternate gene names: NA

Gene position: 2154053-2153391 (Counterclockwise)

Preceding gene: 148359402

Following gene: 148359394

Centisome position: 60.23

GC content: 36.2

Gene sequence:

>663_bases
ATGTCATTTGAATTGGTCGCATATGAAAAATTAAAAGGAAGCATCAGGGAAAGTATCATTACTTTAATCAAGTCCCATAA
TGAGAAAGCCAAAATTATTGAGGACAAATTAGAGTACTCAGTAAAAGAAGTTTCAAGAGAAAGGCAACCACAAGTCCTTG
TCTTGCTAAAAACTATCGAACTGCTGGATAACTCATCCAAAGAGCCAGAAGATAAGGCACGCGTATTAAATGCATTGGCC
TATTACATTCGTGATCAGATTGCTGCAACTTATAAATACACCTCTCCCGACAACAGTGATTTTTATAAATCTCTTACCAT
ATCGCTTGATTTGAATAAGGATAATAATCCTAATCGGGAAGATTTGGCTGATATGTACAGTGCTTTGGAAAAATTCCTTC
GTTCCCATGTTTATAAAAATTCTGACCCAAGAAAAGGGTATTTGGATAAACAACCTTTCGCAATCAAGCATTATTCCGTT
GTTGATGATATTCTTGAATTATCTGATAGAGTGCATAAATTAAGACATGAGATTATTATCGCCGCTCGCGATTTGCATTT
ACTGCAACAAAAACCAAAGAGCTCTCAAGGCGGTCTTTTTAGTGTTCCATCAGGAAAAGAAAAAGTCACCGATACTCATG
AGGTTGCAAATCATCGCCTTTAA

Upstream 100 bases:

>100_bases
TAAAAAGAAAAAGCATGACGAAAAGAGAGAATTGGTTTAAACTGGCCTACAGTGAAAGCATTTCACTAGTCCTGTTCATG
GAGTATAAGGAGAAAATAAG

Downstream 100 bases:

>100_bases
GCTTTCTACTCTCACCTCTTCACTCAGGAAGGGGTGTAAGACTCCTGTTTTACCGGATAACCACTCATTGCCCAAGCCAT
AATTCCACCATCCACAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSFELVAYEKLKGSIRESIITLIKSHNEKAKIIEDKLEYSVKEVSRERQPQVLVLLKTIELLDNSSKEPEDKARVLNALA
YYIRDQIAATYKYTSPDNSDFYKSLTISLDLNKDNNPNREDLADMYSALEKFLRSHVYKNSDPRKGYLDKQPFAIKHYSV
VDDILELSDRVHKLRHEIIIAARDLHLLQQKPKSSQGGLFSVPSGKEKVTDTHEVANHRL

Sequences:

>Translated_220_residues
MSFELVAYEKLKGSIRESIITLIKSHNEKAKIIEDKLEYSVKEVSRERQPQVLVLLKTIELLDNSSKEPEDKARVLNALA
YYIRDQIAATYKYTSPDNSDFYKSLTISLDLNKDNNPNREDLADMYSALEKFLRSHVYKNSDPRKGYLDKQPFAIKHYSV
VDDILELSDRVHKLRHEIIIAARDLHLLQQKPKSSQGGLFSVPSGKEKVTDTHEVANHRL
>Mature_219_residues
SFELVAYEKLKGSIRESIITLIKSHNEKAKIIEDKLEYSVKEVSRERQPQVLVLLKTIELLDNSSKEPEDKARVLNALAY
YIRDQIAATYKYTSPDNSDFYKSLTISLDLNKDNNPNREDLADMYSALEKFLRSHVYKNSDPRKGYLDKQPFAIKHYSVV
DDILELSDRVHKLRHEIIIAARDLHLLQQKPKSSQGGLFSVPSGKEKVTDTHEVANHRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25371; Mature: 25240

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFELVAYEKLKGSIRESIITLIKSHNEKAKIIEDKLEYSVKEVSRERQPQVLVLLKTIE
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH
LLDNSSKEPEDKARVLNALAYYIRDQIAATYKYTSPDNSDFYKSLTISLDLNKDNNPNRE
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEEEEECCCCCCCHH
DLADMYSALEKFLRSHVYKNSDPRKGYLDKQPFAIKHYSVVDDILELSDRVHKLRHEIII
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AARDLHLLQQKPKSSQGGLFSVPSGKEKVTDTHEVANHRL
HHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFELVAYEKLKGSIRESIITLIKSHNEKAKIIEDKLEYSVKEVSRERQPQVLVLLKTIE
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH
LLDNSSKEPEDKARVLNALAYYIRDQIAATYKYTSPDNSDFYKSLTISLDLNKDNNPNRE
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEEEEECCCCCCCHH
DLADMYSALEKFLRSHVYKNSDPRKGYLDKQPFAIKHYSVVDDILELSDRVHKLRHEIII
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AARDLHLLQQKPKSSQGGLFSVPSGKEKVTDTHEVANHRL
HHHHHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA