Click here to switch to the map view.

The map label for this gene is glyQ [H]

Identifier: 148359387

GI number: 148359387

Start: 2142200

End: 2143105

Strand: Reverse

Name: glyQ [H]

Synonym: LPC_1285

Alternate gene names: 148359387

Gene position: 2143105-2142200 (Counterclockwise)

Preceding gene: 148359388

Following gene: 148359386

Centisome position: 59.92

GC content: 40.4

Gene sequence:

>906_bases
ATGACTAAACCTACTACTTTTCAGGAAATTATACTGACCTTGCAAAAATATTGGTCAGATCTTGGTTGTGTTATTTTGCA
ACCCTTGGATCTGGAAGTTGGCGCGGGTACCTTTCATCCAGCTACTTTTTTAAGAGCGATTGGACCTGAGCCATGGTCAG
CAGCTTATGTTCAGCCATCCAGAAGGCCGACGGATGGCCGTTATGGAGAAAATCCAAACCGGGTTCAGCATTATTATCAA
TTTCAGGTGGTATTAAAACCGTCGCCATTGGATATACAAGACAGATACTTGGATTCGTTACGCGCACTTGGAGTAGATCC
CTTATTGGATGATATCCGTTTTGTCGAAGACAATTGGGAGTCACCAACTCTAGGCGCATGGGGCTTAGGTTGGGAGGTTT
GGCAAAATGGAATGGAGGTGTCTCAGTTTACTTATTTTCAACAAGTAGGTGGACTTGTATGTAAACCAATCACTGGTGAA
TTAACCTATGGTTTGGAACGTATCGCAATGTTTGTTTTAGGGGTAGATAACTTATTTGATTTGCCTTGGTGTAAAACAGC
TAATGGTATAGTGACATATGGGGATGTATTCCATCAAAATGAAGTAGAGATGTCAGCTTATAATTTTGAACATGCCAATG
TTGAAGAATTATTTAAGCAATTTGATTATTATGAAGGAGAGGCACAAAAATTGATAGCTTTGCAATTACCTCTTCCTGCT
TACGAAATGGTAATAAAAGCTTCTCACACTTTTAACTTACTGGATGCACGTAAAGCAATTTCTGTGACAGAGCGGCAAAG
GTATATATTACGTGTAAGACATCTATCAAGAGCAGTAGCTCAAGCTTACTATCAAGCGCGCGAGGCGTTAGGTTTCCCTA
TGCAAAAGGTGTGTAATGGTCAATGA

Upstream 100 bases:

>100_bases
AATTCTCTAAATGAAAGATAGGTTTTATGGGATATATCCTGGATAAAAGGATTAAAAACCAACCTATATTTAAAGATCAT
ATTTGTTTTTTGAGATTTTC

Downstream 100 bases:

>100_bases
TTTTATTTTTGAATTAGGATGTGAAGAGCTGCCTTCTGGTGCTGTTTGGCCTTTGGCAAATGAGTTTTCTACTCGATTGT
TAGCCGCATTAGATAAGGCG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTKPTTFQEIILTLQKYWSDLGCVILQPLDLEVGAGTFHPATFLRAIGPEPWSAAYVQPSRRPTDGRYGENPNRVQHYYQ
FQVVLKPSPLDIQDRYLDSLRALGVDPLLDDIRFVEDNWESPTLGAWGLGWEVWQNGMEVSQFTYFQQVGGLVCKPITGE
LTYGLERIAMFVLGVDNLFDLPWCKTANGIVTYGDVFHQNEVEMSAYNFEHANVEELFKQFDYYEGEAQKLIALQLPLPA
YEMVIKASHTFNLLDARKAISVTERQRYILRVRHLSRAVAQAYYQAREALGFPMQKVCNGQ

Sequences:

>Translated_301_residues
MTKPTTFQEIILTLQKYWSDLGCVILQPLDLEVGAGTFHPATFLRAIGPEPWSAAYVQPSRRPTDGRYGENPNRVQHYYQ
FQVVLKPSPLDIQDRYLDSLRALGVDPLLDDIRFVEDNWESPTLGAWGLGWEVWQNGMEVSQFTYFQQVGGLVCKPITGE
LTYGLERIAMFVLGVDNLFDLPWCKTANGIVTYGDVFHQNEVEMSAYNFEHANVEELFKQFDYYEGEAQKLIALQLPLPA
YEMVIKASHTFNLLDARKAISVTERQRYILRVRHLSRAVAQAYYQAREALGFPMQKVCNGQ
>Mature_300_residues
TKPTTFQEIILTLQKYWSDLGCVILQPLDLEVGAGTFHPATFLRAIGPEPWSAAYVQPSRRPTDGRYGENPNRVQHYYQF
QVVLKPSPLDIQDRYLDSLRALGVDPLLDDIRFVEDNWESPTLGAWGLGWEVWQNGMEVSQFTYFQQVGGLVCKPITGEL
TYGLERIAMFVLGVDNLFDLPWCKTANGIVTYGDVFHQNEVEMSAYNFEHANVEELFKQFDYYEGEAQKLIALQLPLPAY
EMVIKASHTFNLLDARKAISVTERQRYILRVRHLSRAVAQAYYQAREALGFPMQKVCNGQ

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=296, Percent_Identity=72.6351351351351, Blast_Score=454, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 34458; Mature: 34326

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPTTFQEIILTLQKYWSDLGCVILQPLDLEVGAGTFHPATFLRAIGPEPWSAAYVQPS
CCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCHHHHHHHHCCCCCCCCEECCC
RRPTDGRYGENPNRVQHYYQFQVVLKPSPLDIQDRYLDSLRALGVDPLLDDIRFVEDNWE
CCCCCCCCCCCHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
SPTLGAWGLGWEVWQNGMEVSQFTYFQQVGGLVCKPITGELTYGLERIAMFVLGVDNLFD
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCHHCC
LPWCKTANGIVTYGDVFHQNEVEMSAYNFEHANVEELFKQFDYYEGEAQKLIALQLPLPA
CCCCCCCCCEEEECHHHCCCCCEEHEECCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCH
YEMVIKASHTFNLLDARKAISVTERQRYILRVRHLSRAVAQAYYQAREALGFPMQKVCNG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
Q
C
>Mature Secondary Structure 
TKPTTFQEIILTLQKYWSDLGCVILQPLDLEVGAGTFHPATFLRAIGPEPWSAAYVQPS
CCCCHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCHHHHHHHHCCCCCCCCEECCC
RRPTDGRYGENPNRVQHYYQFQVVLKPSPLDIQDRYLDSLRALGVDPLLDDIRFVEDNWE
CCCCCCCCCCCHHHHEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
SPTLGAWGLGWEVWQNGMEVSQFTYFQQVGGLVCKPITGELTYGLERIAMFVLGVDNLFD
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCHHCC
LPWCKTANGIVTYGDVFHQNEVEMSAYNFEHANVEELFKQFDYYEGEAQKLIALQLPLPA
CCCCCCCCCEEEECHHHCCCCCEEHEECCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCH
YEMVIKASHTFNLLDARKAISVTERQRYILRVRHLSRAVAQAYYQAREALGFPMQKVCNG
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA