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The map label for this gene is ugpA [H]

Identifier: 148359276

GI number: 148359276

Start: 2011120

End: 2011998

Strand: Reverse

Name: ugpA [H]

Synonym: LPC_1172

Alternate gene names: 148359276

Gene position: 2011998-2011120 (Counterclockwise)

Preceding gene: 148359278

Following gene: 148359275

Centisome position: 56.26

GC content: 36.18

Gene sequence:

>879_bases
ATGTCTAAATTTAATCATCAGCGTTTGTTTGCCTGGCTATTTATAGTCCCTCAGCTAATTGTCACTATTATTTTTTTTAT
TTGGCCTGCTTGCAGCGCATTATTGCAATCCTTTTATTATACTGACGCATTTGGTTTGCATAAGAATTTTGCCGGATTGA
CCAATTTTTTTGACTTATTCCTTGATCCCGGTTATGCAAAAGCCATATGGGTTACTTTTGTAATTGCGATTAGTGTGACG
CTTATCACTATGAGTTTAGGTCTTTTAATGGCTACTTTAATAAATTACAGAGGAAAAAGCCAAGGAGTTTATAAGACTTT
ATTGATATGGCCTTATGCAATAGCCCCTGCTGTTGCTGCAATACTTTGGCGGTTTTTATGCCATCCAACTTTAGGATGGT
TGACTCAGGTACTTGAGTTTTTGGGAATTCATTTTAATTATGTCAACGATGCAAATCAGGCTTTGCTGGTTGTTATTTTA
ACCGCCAGTTGGCAGCAGTTTAGTTACAATTTTTTATTTTATTTTGCTGCGCTTAAAGCAGTTCCTCAGACATTAGTTGA
TGCAGCAATCATGGATGGGGCCAATGCATGGCAACGATTCTGGCAAATAATTTTCCCAATCCTGTCGCCCACTACCTTTT
TTCTGTTAATAATGAACCTGATTTATGGTTTTTTTGATACATTTGGAATTATTCAAGTCATGACACACGGAGGTCCTGGT
AATAGCACAACTAATTTAATCTATAAGGTGTATGAAGACGGTTTTGAGGGAATGGATTTGGGAAGTTCATCAGCCCAATC
TGTATTATTGATGATTATTGTAATTGCAGTTTCCTTGTTACAATTTAAATACCTTGAGAAAAAGGTTCATTACGAATGA

Upstream 100 bases:

>100_bases
TTATATCTTTTACAACTCGCATAATGATTTAAAATCGATATAATTTTATTTTAAACTATTGCGATGATAATTATCATTTT
AACAACTACATGGTTAGTTA

Downstream 100 bases:

>100_bases
GACAATTTAAACGTTTTGGGTCGCATGGGTTAATATTGTTTTTTATAGGATTAATGATGGCTCCTTTGTATTTGGCTGTA
GTTGCTGCAAGTCATGAAGG

Product: sn-glycerol-3-phosphate transmembrane ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSKFNHQRLFAWLFIVPQLIVTIIFFIWPACSALLQSFYYTDAFGLHKNFAGLTNFFDLFLDPGYAKAIWVTFVIAISVT
LITMSLGLLMATLINYRGKSQGVYKTLLIWPYAIAPAVAAILWRFLCHPTLGWLTQVLEFLGIHFNYVNDANQALLVVIL
TASWQQFSYNFLFYFAALKAVPQTLVDAAIMDGANAWQRFWQIIFPILSPTTFFLLIMNLIYGFFDTFGIIQVMTHGGPG
NSTTNLIYKVYEDGFEGMDLGSSSAQSVLLMIIVIAVSLLQFKYLEKKVHYE

Sequences:

>Translated_292_residues
MSKFNHQRLFAWLFIVPQLIVTIIFFIWPACSALLQSFYYTDAFGLHKNFAGLTNFFDLFLDPGYAKAIWVTFVIAISVT
LITMSLGLLMATLINYRGKSQGVYKTLLIWPYAIAPAVAAILWRFLCHPTLGWLTQVLEFLGIHFNYVNDANQALLVVIL
TASWQQFSYNFLFYFAALKAVPQTLVDAAIMDGANAWQRFWQIIFPILSPTTFFLLIMNLIYGFFDTFGIIQVMTHGGPG
NSTTNLIYKVYEDGFEGMDLGSSSAQSVLLMIIVIAVSLLQFKYLEKKVHYE
>Mature_291_residues
SKFNHQRLFAWLFIVPQLIVTIIFFIWPACSALLQSFYYTDAFGLHKNFAGLTNFFDLFLDPGYAKAIWVTFVIAISVTL
ITMSLGLLMATLINYRGKSQGVYKTLLIWPYAIAPAVAAILWRFLCHPTLGWLTQVLEFLGIHFNYVNDANQALLVVILT
ASWQQFSYNFLFYFAALKAVPQTLVDAAIMDGANAWQRFWQIIFPILSPTTFFLLIMNLIYGFFDTFGIIQVMTHGGPGN
STTNLIYKVYEDGFEGMDLGSSSAQSVLLMIIVIAVSLLQFKYLEKKVHYE

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=287, Percent_Identity=45.6445993031359, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1790465, Length=254, Percent_Identity=28.3464566929134, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1787570, Length=266, Percent_Identity=27.0676691729323, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33197; Mature: 33065

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKFNHQRLFAWLFIVPQLIVTIIFFIWPACSALLQSFYYTDAFGLHKNFAGLTNFFDLF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDPGYAKAIWVTFVIAISVTLITMSLGLLMATLINYRGKSQGVYKTLLIWPYAIAPAVAA
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ILWRFLCHPTLGWLTQVLEFLGIHFNYVNDANQALLVVILTASWQQFSYNFLFYFAALKA
HHHHHHHCCHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEEHHCHHHHHHHHHHHHHHHHH
VPQTLVDAAIMDGANAWQRFWQIIFPILSPTTFFLLIMNLIYGFFDTFGIIQVMTHGGPG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NSTTNLIYKVYEDGFEGMDLGSSSAQSVLLMIIVIAVSLLQFKYLEKKVHYE
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA