Definition | Orientia tsutsugamushi Boryong, complete genome. |
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Accession | NC_009488 |
Length | 2,127,051 |
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The map label for this gene is rhp2
Identifier: 148284482
GI number: 148284482
Start: 834316
End: 836184
Strand: Direct
Name: rhp2
Synonym: OTBS_0852
Alternate gene names: NA
Gene position: 834316-836184 (Clockwise)
Preceding gene: 148284481
Following gene: 148284484
Centisome position: 39.22
GC content: 28.73
Gene sequence:
>1869_bases ATGTTTAAAAACATATTTTCAGAAGACATCTTAATAAATCAACTGCTTACAGCTCTAACAACTTCTGACCAATCTAAATT CACAGAAGACAATATTTTTTTGTTAGGCAAAAATCTTGCAAAAGTTTTAAATAATATTGCTGAAAATCCTAGTATATCTA ATGTAGAGGAATACCAAAAATGTTTTTCAGACTTGAATAACCAAGACTTATGCAAAGTATTAAAAATACTACAAAATATG ATTATAGCAGATGAAAATAAGGAATTAATAGAAATTATAAGTTCACCACTTTTATATAGATTAACTAAAAAATATAAAGC AGAGCGTGCAGAAGAATTAAATAATAATCATAGTCAAATTTCTGGTAAACATTTTAAAAATAGCAATATTGCGGAACTAC TACGTGATAGAAACATTGCTAAACAGGACGAATTCCCTAAAACAGAGGCTAAAGCAATTGGAATATCTGAAGGATACATA GCTACTGAGAAGTCAAGCGGTCATACATTTCTTTTAAAGAAATTTTATAAAAAAGATATTAGTATTGGAAAAAATTTAGC TAAGATGCCAAGTGAAGAATTGGATAAACTTCAACTAGCTTGGAGCGACAGAAGAGACGCTGTACAAGAATTACTAGCGT CTTCTATATATCAGTTATTATTGTATGGACAAGCTCCAAAAGAAGAATTAGTAATACCTGATAGATCTAATGCAGATTCG CTGTATATTAGGTCTAAGTTTCTTGATAATGCAGTACAGCTTTCAAGATTTTCTGGTATGAAAAGATCAACTGGACTTAA AGCTGAAGCTAAAAATTTACAAAAATTAGAAGGATTTGAAAAAGTAATTGCTGCTTGTCATATACTAGGAGAATTAGATT ATCATTCCGGTAATTTAATAGTACAAAATGGTAAAACTATAGCTAAAGTAGACCATGGTAGATCTTTAATGCAATTCTAT GCAGATTTTGAAAGTATGGTTAGCACAACTGATAACATATTTAATGATCCTTTTTTAAATTATAACTCAGCAATTCAAAA AGGTAATTTATCATTTGATATTAACAAATATAATGACGCATTAAAGCAGATGCTTGCTCAAATAGATGAAAGTCAAATAG ATGCTATAATAGAACAAAAAGTTTCTGAGTTAGCAAAATTAGGATTTGATCCAAAAGGCTTTATTGGAAAGGTTAAGTTT AAAGGAGAAACTTTCATTAGCACCCCTATTAATGACTATCATGCACTGATAAAGTTCTATCAAGTCAATTTAAAAGAAAA TATTAAAAATATGAAAGAAATAGTAAAAGCAACTGATGTAATAAGCAGATTTAGCAACGTATCATCTAAATTTAAGAAAG GGGGATGGTTAAATGCTTTTGCTATTACTAGTATAAAAGAGCCAGTTTTATATGCATACAATCATAACATAAAAATTGAT GGAAAAGATGCTTTAACATGGGCTATTGATAATAATTATCAAATGAATAGCTTAAACCATAGCTATATAGAAGTAGAAAA GTGTAATTATGAGCCACAATGGCAAAAGGATAGTAATGGAAAGTGGCAAAAAAAAGAACATTTGGTGCAAACAATAACAA ATGATATTGTTAAGTGGCATGCTGCAGATTATATTCTAGAAATAGAGAAGAGTAGAAATGATCTCAAAAAACAATTGCAA CCCTTATTAGAGCAATCACAAAATATATTAACAAAAAAATCAGTATCAAAAGAAATAAAAAAATTTGATGATTCTGAGTT AGCTAGAAAGAGAATGTTATTAAATCCTAGGATAAATTACCGTACAAGGATTCAAAAAGCTCGTTCAGCATTTAAGTCTA AAAATTCTCAAGGTTTTGAAATTTCTTGA
Upstream 100 bases:
>100_bases TACGTAAATTCTAGCCTCATTATTTTCAACTTTAACTTGCTAGAGTTTATAGGATCATATACAATTAAAAGTTGAAGATA TTTTATTCAGGAAGGTTCTA
Downstream 100 bases:
>100_bases TTAGATATTCTGCAAAACTTGTAAAGCTTGTAATAAGAAATGCTAGAATAGGATAAGGGGAAATACGAAAGGTAGTAAAT AAAAGGTATGCAAAGAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MFKNIFSEDILINQLLTALTTSDQSKFTEDNIFLLGKNLAKVLNNIAENPSISNVEEYQKCFSDLNNQDLCKVLKILQNM IIADENKELIEIISSPLLYRLTKKYKAERAEELNNNHSQISGKHFKNSNIAELLRDRNIAKQDEFPKTEAKAIGISEGYI ATEKSSGHTFLLKKFYKKDISIGKNLAKMPSEELDKLQLAWSDRRDAVQELLASSIYQLLLYGQAPKEELVIPDRSNADS LYIRSKFLDNAVQLSRFSGMKRSTGLKAEAKNLQKLEGFEKVIAACHILGELDYHSGNLIVQNGKTIAKVDHGRSLMQFY ADFESMVSTTDNIFNDPFLNYNSAIQKGNLSFDINKYNDALKQMLAQIDESQIDAIIEQKVSELAKLGFDPKGFIGKVKF KGETFISTPINDYHALIKFYQVNLKENIKNMKEIVKATDVISRFSNVSSKFKKGGWLNAFAITSIKEPVLYAYNHNIKID GKDALTWAIDNNYQMNSLNHSYIEVEKCNYEPQWQKDSNGKWQKKEHLVQTITNDIVKWHAADYILEIEKSRNDLKKQLQ PLLEQSQNILTKKSVSKEIKKFDDSELARKRMLLNPRINYRTRIQKARSAFKSKNSQGFEIS
Sequences:
>Translated_622_residues MFKNIFSEDILINQLLTALTTSDQSKFTEDNIFLLGKNLAKVLNNIAENPSISNVEEYQKCFSDLNNQDLCKVLKILQNM IIADENKELIEIISSPLLYRLTKKYKAERAEELNNNHSQISGKHFKNSNIAELLRDRNIAKQDEFPKTEAKAIGISEGYI ATEKSSGHTFLLKKFYKKDISIGKNLAKMPSEELDKLQLAWSDRRDAVQELLASSIYQLLLYGQAPKEELVIPDRSNADS LYIRSKFLDNAVQLSRFSGMKRSTGLKAEAKNLQKLEGFEKVIAACHILGELDYHSGNLIVQNGKTIAKVDHGRSLMQFY ADFESMVSTTDNIFNDPFLNYNSAIQKGNLSFDINKYNDALKQMLAQIDESQIDAIIEQKVSELAKLGFDPKGFIGKVKF KGETFISTPINDYHALIKFYQVNLKENIKNMKEIVKATDVISRFSNVSSKFKKGGWLNAFAITSIKEPVLYAYNHNIKID GKDALTWAIDNNYQMNSLNHSYIEVEKCNYEPQWQKDSNGKWQKKEHLVQTITNDIVKWHAADYILEIEKSRNDLKKQLQ PLLEQSQNILTKKSVSKEIKKFDDSELARKRMLLNPRINYRTRIQKARSAFKSKNSQGFEIS >Mature_622_residues MFKNIFSEDILINQLLTALTTSDQSKFTEDNIFLLGKNLAKVLNNIAENPSISNVEEYQKCFSDLNNQDLCKVLKILQNM IIADENKELIEIISSPLLYRLTKKYKAERAEELNNNHSQISGKHFKNSNIAELLRDRNIAKQDEFPKTEAKAIGISEGYI ATEKSSGHTFLLKKFYKKDISIGKNLAKMPSEELDKLQLAWSDRRDAVQELLASSIYQLLLYGQAPKEELVIPDRSNADS LYIRSKFLDNAVQLSRFSGMKRSTGLKAEAKNLQKLEGFEKVIAACHILGELDYHSGNLIVQNGKTIAKVDHGRSLMQFY ADFESMVSTTDNIFNDPFLNYNSAIQKGNLSFDINKYNDALKQMLAQIDESQIDAIIEQKVSELAKLGFDPKGFIGKVKF KGETFISTPINDYHALIKFYQVNLKENIKNMKEIVKATDVISRFSNVSSKFKKGGWLNAFAITSIKEPVLYAYNHNIKID GKDALTWAIDNNYQMNSLNHSYIEVEKCNYEPQWQKDSNGKWQKKEHLVQTITNDIVKWHAADYILEIEKSRNDLKKQLQ PLLEQSQNILTKKSVSKEIKKFDDSELARKRMLLNPRINYRTRIQKARSAFKSKNSQGFEIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71257; Mature: 71257
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKNIFSEDILINQLLTALTTSDQSKFTEDNIFLLGKNLAKVLNNIAENPSISNVEEYQK CCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEECHHHHHHHHHHHCCCCCCCHHHHHH CFSDLNNQDLCKVLKILQNMIIADENKELIEIISSPLLYRLTKKYKAERAEELNNNHSQI HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHC SGKHFKNSNIAELLRDRNIAKQDEFPKTEAKAIGISEGYIATEKSSGHTFLLKKFYKKDI CCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHEECCCCCEEEECCCCCCHHHHHHHHHHHH SIGKNLAKMPSEELDKLQLAWSDRRDAVQELLASSIYQLLLYGQAPKEELVIPDRSNADS HHCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCC LYIRSKFLDNAVQLSRFSGMKRSTGLKAEAKNLQKLEGFEKVIAACHILGELDYHSGNLI EEHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE VQNGKTIAKVDHGRSLMQFYADFESMVSTTDNIFNDPFLNYNSAIQKGNLSFDINKYNDA EECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEHHHHHHH LKQMLAQIDESQIDAIIEQKVSELAKLGFDPKGFIGKVKFKGETFISTPINDYHALIKFY HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHH QVNLKENIKNMKEIVKATDVISRFSNVSSKFKKGGWLNAFAITSIKEPVLYAYNHNIKID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHEEHHHCCCCEEEEECCEEEEC GKDALTWAIDNNYQMNSLNHSYIEVEKCNYEPQWQKDSNGKWQKKEHLVQTITNDIVKWH CCCEEEEEECCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AADYILEIEKSRNDLKKQLQPLLEQSQNILTKKSVSKEIKKFDDSELARKRMLLNPRINY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCH RTRIQKARSAFKSKNSQGFEIS HHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MFKNIFSEDILINQLLTALTTSDQSKFTEDNIFLLGKNLAKVLNNIAENPSISNVEEYQK CCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCEEEECHHHHHHHHHHHCCCCCCCHHHHHH CFSDLNNQDLCKVLKILQNMIIADENKELIEIISSPLLYRLTKKYKAERAEELNNNHSQI HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHC SGKHFKNSNIAELLRDRNIAKQDEFPKTEAKAIGISEGYIATEKSSGHTFLLKKFYKKDI CCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHEECCCCCEEEECCCCCCHHHHHHHHHHHH SIGKNLAKMPSEELDKLQLAWSDRRDAVQELLASSIYQLLLYGQAPKEELVIPDRSNADS HHCCHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCC LYIRSKFLDNAVQLSRFSGMKRSTGLKAEAKNLQKLEGFEKVIAACHILGELDYHSGNLI EEHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE VQNGKTIAKVDHGRSLMQFYADFESMVSTTDNIFNDPFLNYNSAIQKGNLSFDINKYNDA EECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEHHHHHHH LKQMLAQIDESQIDAIIEQKVSELAKLGFDPKGFIGKVKFKGETFISTPINDYHALIKFY HHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHH QVNLKENIKNMKEIVKATDVISRFSNVSSKFKKGGWLNAFAITSIKEPVLYAYNHNIKID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHEEHHHCCCCEEEEECCEEEEC GKDALTWAIDNNYQMNSLNHSYIEVEKCNYEPQWQKDSNGKWQKKEHLVQTITNDIVKWH CCCEEEEEECCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH AADYILEIEKSRNDLKKQLQPLLEQSQNILTKKSVSKEIKKFDDSELARKRMLLNPRINY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCH RTRIQKARSAFKSKNSQGFEIS HHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]