Definition | Orientia tsutsugamushi Boryong, complete genome. |
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Accession | NC_009488 |
Length | 2,127,051 |
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The map label for this gene is 148284460
Identifier: 148284460
GI number: 148284460
Start: 788108
End: 788533
Strand: Direct
Name: 148284460
Synonym: OTBS_0809
Alternate gene names: NA
Gene position: 788108-788533 (Clockwise)
Preceding gene: 148284455
Following gene: 148284462
Centisome position: 37.05
GC content: 30.75
Gene sequence:
>426_bases ATGAGTTCCTTTTTTGCTCCACCCTCTATTCTTGCATATAGACATTTCAATGCCACTTTCATCTATGTATACCAAGTTTT CCTTAGGTATAGCACACTTATTCACTTGTTGATATTTTTCTCTTATTTCTGGTTTTGCTTCCATGTAGGTAAACGTTTTT TTTATAACTATAGCCGAATTTTTTCATATAATAACTCGCTACCCTTATTGAAATTCCAAAATGTTTCCCTGCTTGTGCCA GAGTTAGATTTTGATTTAGCGAAATGTATTTTTCAAATTCTATCTTATATATTTTCCCTTTTTTACCAAGACGATCTCTT TCTTTATAATGACCTTCTGATTTATATCTTTTATACCAATTTCTTACTGTGTTTGCTGCTATATCAAATTTTACTGAGGC AGCATTACAACTTTTTCCTTCATTAA
Upstream 100 bases:
>100_bases TCTTGTATTACATGCACCATTGTGCGATTGATTTATTATTAACATAACCAGCTATAATATTTGTACGCTCGTAATATTTA CCACTCTTTTTGCTGCTTAC
Downstream 100 bases:
>100_bases CACATTTTATTACTTTCTCTCGAAAGTCTTGGCTATATGATTTTGGCATTCTCTTTTCAGAATACTATGCTTAAACTTCA TTGTAAATGACTATATATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSSFFAPPSILAYRHFNATFIYVYQVFLRYSTLIHLLIFFSYFWFCFHVGKRFFYNYSRIFSYNNSLPLLKFQNVSLLVP ELDFDLAKCIFQILSYIFSLFYQDDLFLYNDLLIYIFYTNFLLCLLLYQILLRQHYNFFLH
Sequences:
>Translated_141_residues MSSFFAPPSILAYRHFNATFIYVYQVFLRYSTLIHLLIFFSYFWFCFHVGKRFFYNYSRIFSYNNSLPLLKFQNVSLLVP ELDFDLAKCIFQILSYIFSLFYQDDLFLYNDLLIYIFYTNFLLCLLLYQILLRQHYNFFLH >Mature_140_residues SSFFAPPSILAYRHFNATFIYVYQVFLRYSTLIHLLIFFSYFWFCFHVGKRFFYNYSRIFSYNNSLPLLKFQNVSLLVPE LDFDLAKCIFQILSYIFSLFYQDDLFLYNDLLIYIFYTNFLLCLLLYQILLRQHYNFFLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17389; Mature: 17257
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSFFAPPSILAYRHFNATFIYVYQVFLRYSTLIHLLIFFSYFWFCFHVGKRFFYNYSRI CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSYNNSLPLLKFQNVSLLVPELDFDLAKCIFQILSYIFSLFYQDDLFLYNDLLIYIFYTN HCCCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FLLCLLLYQILLRQHYNFFLH HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSFFAPPSILAYRHFNATFIYVYQVFLRYSTLIHLLIFFSYFWFCFHVGKRFFYNYSRI CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSYNNSLPLLKFQNVSLLVPELDFDLAKCIFQILSYIFSLFYQDDLFLYNDLLIYIFYTN HCCCCCCCEEEECCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FLLCLLLYQILLRQHYNFFLH HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA