Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is rhp4

Identifier: 148284455

GI number: 148284455

Start: 779541

End: 780119

Strand: Direct

Name: rhp4

Synonym: OTBS_0799

Alternate gene names: NA

Gene position: 779541-780119 (Clockwise)

Preceding gene: 148284454

Following gene: 148284460

Centisome position: 36.65

GC content: 30.05

Gene sequence:

>579_bases
ATGGTGGTTATGCGAATCAGTGATACTAGTGATTCTATTCAAATCTTACCTAACAGCAATAATTTAGCTGAGCTAACAAA
ATTAGTTTACAATTGTATATTTAACCATGGAGGTTATAATATTTTGTTCTTGCTTGGATGGAATAACAGCACATATCGAT
GCATTCAAGATAAAATTGTGCAGCTTCGTAATACTGAAACAGAAACAATTAGGGTTATACGTAGTACTCAAGATGATCTT
CCTATATCCTTAGAATACTTTTGTGAAGACCAAAGCAAACAAAATGTATTATATACACAAGTAAGTTTTACTTTTAATAC
ACTAAGATTAATAGTAGAGAAGTATTATTATGTATCTCTACGGTTCAAACCTTACAAATCTAGCCTAGCTATTGTATACA
ATAGTCACAGTGAAAATTTACAGAAACAATTAGATGATTTTTTTACTCAACAATGCATGAATCACAATGAAAGTAGCAAA
TGCATCCATCACAGTGAAAGTAGCATTAGTGTTTTAGATATTGATCAATTTAGAGATTTTGTAGGTGATATATTATTAAT
TGATGATCCAGAACGATAG

Upstream 100 bases:

>100_bases
GCTTGTGTATTAGTTTTTTAATACTTATACAACAAACACAGCTTGATAATTCAGCTAATGTAATTTATAAACCAGGAGTG
TAATGCAATTTTAAATATAT

Downstream 100 bases:

>100_bases
TATATGTATTTCAAGCAGCAATGCTCCATTTTGCAAATATATAATGCTATGTATGCTAGTTAGAAAAAGTTTGCATTCTA
ACTAGCATAAAGCTCACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MVVMRISDTSDSIQILPNSNNLAELTKLVYNCIFNHGGYNILFLLGWNNSTYRCIQDKIVQLRNTETETIRVIRSTQDDL
PISLEYFCEDQSKQNVLYTQVSFTFNTLRLIVEKYYYVSLRFKPYKSSLAIVYNSHSENLQKQLDDFFTQQCMNHNESSK
CIHHSESSISVLDIDQFRDFVGDILLIDDPER

Sequences:

>Translated_192_residues
MVVMRISDTSDSIQILPNSNNLAELTKLVYNCIFNHGGYNILFLLGWNNSTYRCIQDKIVQLRNTETETIRVIRSTQDDL
PISLEYFCEDQSKQNVLYTQVSFTFNTLRLIVEKYYYVSLRFKPYKSSLAIVYNSHSENLQKQLDDFFTQQCMNHNESSK
CIHHSESSISVLDIDQFRDFVGDILLIDDPER
>Mature_192_residues
MVVMRISDTSDSIQILPNSNNLAELTKLVYNCIFNHGGYNILFLLGWNNSTYRCIQDKIVQLRNTETETIRVIRSTQDDL
PISLEYFCEDQSKQNVLYTQVSFTFNTLRLIVEKYYYVSLRFKPYKSSLAIVYNSHSENLQKQLDDFFTQQCMNHNESSK
CIHHSESSISVLDIDQFRDFVGDILLIDDPER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22475; Mature: 22475

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVMRISDTSDSIQILPNSNNLAELTKLVYNCIFNHGGYNILFLLGWNNSTYRCIQDKIV
CEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHH
QLRNTETETIRVIRSTQDDLPISLEYFCEDQSKQNVLYTQVSFTFNTLRLIVEKYYYVSL
HHCCCCHHHEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHEEEEEE
RFKPYKSSLAIVYNSHSENLQKQLDDFFTQQCMNHNESSKCIHHSESSISVLDIDQFRDF
EEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEHHHHHHH
VGDILLIDDPER
HCCEEEEECCCC
>Mature Secondary Structure
MVVMRISDTSDSIQILPNSNNLAELTKLVYNCIFNHGGYNILFLLGWNNSTYRCIQDKIV
CEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHH
QLRNTETETIRVIRSTQDDLPISLEYFCEDQSKQNVLYTQVSFTFNTLRLIVEKYYYVSL
HHCCCCHHHEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHEEEEEE
RFKPYKSSLAIVYNSHSENLQKQLDDFFTQQCMNHNESSKCIHHSESSISVLDIDQFRDF
EEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEHHHHHHH
VGDILLIDDPER
HCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA