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The map label for this gene is infA

Identifier: 148268668

GI number: 148268668

Start: 2396871

End: 2397089

Strand: Reverse

Name: infA

Synonym: SaurJH9_2255

Alternate gene names: 148268668

Gene position: 2397089-2396871 (Counterclockwise)

Preceding gene: 148268669

Following gene: 148268667

Centisome position: 82.47

GC content: 33.33

Gene sequence:

>219_bases
ATGGCTAAACAAGATGTAATTGAATTAGAAGGTACTGTATTAGATACTTTACCGAACGCAATGTTTAAAGTAGAATTAGA
AAATGGTCATGAGATTTTAGCTCACGTAAGTGGTAAAATCAGAATGAATTACATTCGTATTCTACCTGGCGACAAAGTAA
CTGTTGAGATGTCTCCGTACGATTTAACACGCGGAAGAATTACTTATCGTTATAAATAA

Upstream 100 bases:

>100_bases
ATTTTTGTTTAACTTATAAAATTAATCACTGATAGATTCGTAACAATAAAGTTGTCTATTGACGATTACCTTACTATTGC
AAAAAGGGGGAAGTTAATCA

Downstream 100 bases:

>100_bases
TCGTCACTCCATAATATAGGGAGGTATAAAAATGAAAGTAAGACCATCAGTAAAACCTATTTGCGAAAAATGTAAAGTCA
TTAAACGTAAAGGTAAAGTA

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MAKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNYIRILPGDKVTVEMSPYDLTRGRITYRYK

Sequences:

>Translated_72_residues
MAKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNYIRILPGDKVTVEMSPYDLTRGRITYRYK
>Mature_71_residues
AKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNYIRILPGDKVTVEMSPYDLTRGRITYRYK

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain

Homologues:

Organism=Escherichia coli, GI1787110, Length=72, Percent_Identity=69.4444444444444, Blast_Score=114, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IF1_STAA1 (A7X5D0)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442802.1
- ProteinModelPortal:   A7X5D0
- SMR:   A7X5D0
- STRING:   A7X5D0
- EnsemblBacteria:   EBSTAT00000004055
- GeneID:   5561494
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_2212
- eggNOG:   COG0361
- GeneTree:   EBGT00050000025129
- HOGENOM:   HBG286099
- OMA:   KMRMHFI
- ProtClustDB:   PRK00276
- BioCyc:   SAUR418127:SAHV_2212-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00075
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00316
- TIGRFAMs:   TIGR00008

Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 8280; Mature: 8149

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNYIRILPGDKVTVEMSPY
CCCCCEEEECCEEECCCCCEEEEEEECCCCEEEEEECCEEEEEEEEECCCCEEEEEECCC
DLTRGRITYRYK
CCCCCEEEEEEC
>Mature Secondary Structure 
AKQDVIELEGTVLDTLPNAMFKVELENGHEILAHVSGKIRMNYIRILPGDKVTVEMSPY
CCCCEEEECCEEECCCCCEEEEEEECCCCEEEEEECCEEEEEEEEECCCCEEEEEECCC
DLTRGRITYRYK
CCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA