| Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
|---|---|
| Accession | NC_009487 |
| Length | 2,906,700 |
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The map label for this gene is 148268439
Identifier: 148268439
GI number: 148268439
Start: 2150782
End: 2151945
Strand: Reverse
Name: 148268439
Synonym: SaurJH9_2022
Alternate gene names: NA
Gene position: 2151945-2150782 (Counterclockwise)
Preceding gene: 148268440
Following gene: 148268438
Centisome position: 74.03
GC content: 32.13
Gene sequence:
>1164_bases ATGAGTATTCTAGAAAAGATATTTAAAACTAGGAAAGATATATCATATATGCTTGATTTAGATATGATAGAAGATTTATC ACAACAAGCGTATGTGAAACGTTTAGCGATTGATAGTTGTATTGAATTTGTTGCGCGAGCTGTCGCTCAAAGTCATTTTA AAGTATTGGAAGGTAATAGAATTCAAAAGAATGATGTTTACTACAAGTTAAATATAAAACCAAATACTGACTTATCAAGC GATAGTTTTTGGCAACAAGTTATATATAAACTAATTTACGATAACGAGGTTTTAATCGTAGTAAGTGACAGCAAAGAATT ACTTATCGCAGATAGCTTTTACAGAGAAGAGTATGCTTTGTATGATGATATATTCAAAGATGTAACGGTTAAAGATTATA CTTATCAACGTACTTTCACAATGCAAGAGGTCATATATTTAAAGTACAACAACAATAAAGTGACACACTTTGTAGAAAGT CTATTCGAAGATTACGGGAAAATATTCGGAAGAATGATAGGTGCACAATTAAAAAACTATCAAATAAGAGGGATTTTGAA ATCTGCCTCTAGCGCATATGACGAAAAGAATATAGAAAAATTACAAGCGTTCACAAATAAATTATTCAATACTTTTAATA AAAACCAACTAGCAATCGCGCCTTTGATAGAAGGTTTTGATTATGAGGAATTATCTAATGGTGGTAAGAATAGTAACATG CCTTTTTCTGAATTGAGTGAGCTAATGAGAGATGCAATAAAAAATGTTGCGTTGATGATTGGTATACCCCCAGGTTTGAT TTACGGAGAAACAGCTGATTTGGAAAAAAACACGCTTGTATTTGAGAAGTTCTGTTTAACACCTTTATTAAAAAAGATTC AGAACGAATTAAACGCGAAACTCATAACTCAAAGCATGTATTTGAAAGATACAAGAATAGAAATTGTCGGTGTGAATAAA AAAGACCCACTTCAATATGCTGAAGCAATTGACAAACTTGTAAGTTCTGGTTCATTTACAAGGAATGAGGTGCGGATTAT GTTAGGTGAAGAACCGTCTGACAATCCTGAATTAGACGAATATCTAGTGACGAAGAACTACGAAAAAGCAAACGAAAATG GTAGTACATTGAAAGGTGGTGATGAAGATGAAAGTGGAGATTAA
Upstream 100 bases:
>100_bases TGTTCATGCGTTATATAGAGCGGATGATATAGTAGACAAAGACATGTCTAAAGCACTTGATGCATTAATGAGTATAGATT TCTAATAGAGGAGGTGAGAC
Downstream 100 bases:
>100_bases AGGCGTCATCGTTTCCAACGAAGATAAATGGGTTTACGAAATGCTTGGTATGGATTCGACTTGTCCTAAAGATGTTTTAA CACAACTAGAATTTAGTGAT
Product: HK97 family phage portal protein
Products: NA
Alternate protein names: HK97 Family Phage Portal Protein; Phage Portal Protein HK
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MSILEKIFKTRKDISYMLDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNRIQKNDVYYKLNIKPNTDLSS DSFWQQVIYKLIYDNEVLIVVSDSKELLIADSFYREEYALYDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVES LFEDYGKIFGRMIGAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNM PFSELSELMRDAIKNVALMIGIPPGLIYGETADLEKNTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNK KDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLVTKNYEKANENGSTLKGGDEDESGD
Sequences:
>Translated_387_residues MSILEKIFKTRKDISYMLDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNRIQKNDVYYKLNIKPNTDLSS DSFWQQVIYKLIYDNEVLIVVSDSKELLIADSFYREEYALYDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVES LFEDYGKIFGRMIGAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNM PFSELSELMRDAIKNVALMIGIPPGLIYGETADLEKNTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNK KDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLVTKNYEKANENGSTLKGGDEDESGD >Mature_386_residues SILEKIFKTRKDISYMLDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNRIQKNDVYYKLNIKPNTDLSSD SFWQQVIYKLIYDNEVLIVVSDSKELLIADSFYREEYALYDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESL FEDYGKIFGRMIGAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNMP FSELSELMRDAIKNVALMIGIPPGLIYGETADLEKNTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKK DPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLVTKNYEKANENGSTLKGGDEDESGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44504; Mature: 44373
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILEKIFKTRKDISYMLDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE IQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSKELLIADSFYREEYAL EECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHHH YDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMIGAQLKNY HHHHHHCCCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC QIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHHCCCCCCCC PFSELSELMRDAIKNVALMIGIPPGLIYGETADLEKNTLVFEKFCLTPLLKKIQNELNAK CHHHHHHHHHHHHHCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDE HHHHHHHEEECEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHH YLVTKNYEKANENGSTLKGGDEDESGD HHHHCCCHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SILEKIFKTRKDISYMLDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE IQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSKELLIADSFYREEYAL EECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHHH YDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMIGAQLKNY HHHHHHCCCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC QIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHHCCCCCCCC PFSELSELMRDAIKNVALMIGIPPGLIYGETADLEKNTLVFEKFCLTPLLKKIQNELNAK CHHHHHHHHHHHHHCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDE HHHHHHHEEECEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHH YLVTKNYEKANENGSTLKGGDEDESGD HHHHCCCHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA