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The map label for this gene is clpP [H]

Identifier: 148268438

GI number: 148268438

Start: 2150061

End: 2150798

Strand: Reverse

Name: clpP [H]

Synonym: SaurJH9_2021

Alternate gene names: 148268438

Gene position: 2150798-2150061 (Counterclockwise)

Preceding gene: 148268439

Following gene: 148268437

Centisome position: 73.99

GC content: 35.77

Gene sequence:

>738_bases
ATGAAAGTGGAGATTAAAGGCGTCATCGTTTCCAACGAAGATAAATGGGTTTACGAAATGCTTGGTATGGATTCGACTTG
TCCTAAAGATGTTTTAACACAACTAGAATTTAGTGATGAAGATGTTGATATTATAATTAACTCAAATGGTGGTAACCTAG
TAGCTGGTAGTGAAATATATACACATTTAAGAGCTCATAAAGGCAAAGTGAATGTTCGTATCACAGCAATAGCAGCAAGT
GCGGCATCGCTTATCGCAATGGCTGGTGACCACATCGAAATGAGTCCGGTTGCTAGAATGATGATTCACAATCCTTCAAG
TATTGCGCAAGGAGAAGCGAAAGATCTAAATCATGCTGCAGAAACATTAGAACATGTTGGTCAAATAATGGCTGAGGCAT
ATGCGGTTAGAGCTGGTAAAAACAAACAAGAACTTATAGAAATGATGGCTAAGGAAACATGGCTAAATGCTGATGAAGCC
ATTGAACAAGGTTTTGCGGATAGTAAAATGTTTGAAAACGACAATATGCAAATTGTAGCAAGCGATACACAAGTGTTATC
GAAAGATGTATTAAATCGTGTAACAGCTTTGGTAAGTAAAACGCCAGAGGTTAACATTGATATTGACGCAATAGCAAATA
AAGTAATTGAAAAAATAAATATGAAAGAAAAGGAATCAGAAATCGATGTTGCAGATAGTAAATTATCAGCAAATGGATTT
TCAAGATTCCTTTTTTAA

Upstream 100 bases:

>100_bases
GAAGAACCGTCTGACAATCCTGAATTAGACGAATATCTAGTGACGAAGAACTACGAAAAAGCAAACGAAAATGGTAGTAC
ATTGAAAGGTGGTGATGAAG

Downstream 100 bases:

>100_bases
TACAAAAATAGGAGGTCATAAAATGACTATAAATTTATCGGAAACATTCGCAAATGCGAAAAACGAATTTATTAATGCAG
TAAACAACGGTGAACCGCAA

Product: peptidase S14, ClpP

Products: NA

Alternate protein names: Endopeptidase Clp [H]

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKVEIKGVIVSNEDKWVYEMLGMDSTCPKDVLTQLEFSDEDVDIIINSNGGNLVAGSEIYTHLRAHKGKVNVRITAIAAS
AASLIAMAGDHIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELIEMMAKETWLNADEA
IEQGFADSKMFENDNMQIVASDTQVLSKDVLNRVTALVSKTPEVNIDIDAIANKVIEKINMKEKESEIDVADSKLSANGF
SRFLF

Sequences:

>Translated_245_residues
MKVEIKGVIVSNEDKWVYEMLGMDSTCPKDVLTQLEFSDEDVDIIINSNGGNLVAGSEIYTHLRAHKGKVNVRITAIAAS
AASLIAMAGDHIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELIEMMAKETWLNADEA
IEQGFADSKMFENDNMQIVASDTQVLSKDVLNRVTALVSKTPEVNIDIDAIANKVIEKINMKEKESEIDVADSKLSANGF
SRFLF
>Mature_245_residues
MKVEIKGVIVSNEDKWVYEMLGMDSTCPKDVLTQLEFSDEDVDIIINSNGGNLVAGSEIYTHLRAHKGKVNVRITAIAAS
AASLIAMAGDHIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELIEMMAKETWLNADEA
IEQGFADSKMFENDNMQIVASDTQVLSKDVLNRVTALVSKTPEVNIDIDAIANKVIEKINMKEKESEIDVADSKLSANGF
SRFLF

Specific function: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins [H]

COG id: COG0740

COG function: function code OU; Protease subunit of ATP-dependent Clp proteases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S14 family [H]

Homologues:

Organism=Escherichia coli, GI1786641, Length=141, Percent_Identity=31.9148936170213, Blast_Score=64, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17538017, Length=171, Percent_Identity=27.4853801169591, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001907
- InterPro:   IPR018215 [H]

Pfam domain/function: PF00574 CLP_protease [H]

EC number: =3.4.21.92 [H]

Molecular weight: Translated: 26869; Mature: 26869

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVEIKGVIVSNEDKWVYEMLGMDSTCPKDVLTQLEFSDEDVDIIINSNGGNLVAGSEIY
CEEEEEEEEEECCCCHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCEEECHHHH
THLRAHKGKVNVRITAIAASAASLIAMAGDHIEMSPVARMMIHNPSSIAQGEAKDLNHAA
HHHHHCCCEEEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHH
ETLEHVGQIMAEAYAVRAGKNKQELIEMMAKETWLNADEAIEQGFADSKMFENDNMQIVA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHCCCCCEEEEE
SDTQVLSKDVLNRVTALVSKTPEVNIDIDAIANKVIEKINMKEKESEIDVADSKLSANGF
CHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCHHHCCCCCCCCHHCCCCH
SRFLF
HHHCC
>Mature Secondary Structure
MKVEIKGVIVSNEDKWVYEMLGMDSTCPKDVLTQLEFSDEDVDIIINSNGGNLVAGSEIY
CEEEEEEEEEECCCCHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCEEECHHHH
THLRAHKGKVNVRITAIAASAASLIAMAGDHIEMSPVARMMIHNPSSIAQGEAKDLNHAA
HHHHHCCCEEEEEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHCCCHHHHHHHH
ETLEHVGQIMAEAYAVRAGKNKQELIEMMAKETWLNADEAIEQGFADSKMFENDNMQIVA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHCCCCCEEEEE
SDTQVLSKDVLNRVTALVSKTPEVNIDIDAIANKVIEKINMKEKESEIDVADSKLSANGF
CHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCHHHCCCCCCCCHHCCCCH
SRFLF
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA