Definition Staphylococcus aureus subsp. aureus JH9, complete genome.
Accession NC_009487
Length 2,906,700

Click here to switch to the map view.

The map label for this gene is 148268439

Identifier: 148268439

GI number: 148268439

Start: 2150782

End: 2151945

Strand: Reverse

Name: 148268439

Synonym: SaurJH9_2022

Alternate gene names: NA

Gene position: 2151945-2150782 (Counterclockwise)

Preceding gene: 148268440

Following gene: 148268438

Centisome position: 74.03

GC content: 32.13

Gene sequence:

>1164_bases
ATGAGTATTCTAGAAAAGATATTTAAAACTAGGAAAGATATATCATATATGCTTGATTTAGATATGATAGAAGATTTATC
ACAACAAGCGTATGTGAAACGTTTAGCGATTGATAGTTGTATTGAATTTGTTGCGCGAGCTGTCGCTCAAAGTCATTTTA
AAGTATTGGAAGGTAATAGAATTCAAAAGAATGATGTTTACTACAAGTTAAATATAAAACCAAATACTGACTTATCAAGC
GATAGTTTTTGGCAACAAGTTATATATAAACTAATTTACGATAACGAGGTTTTAATCGTAGTAAGTGACAGCAAAGAATT
ACTTATCGCAGATAGCTTTTACAGAGAAGAGTATGCTTTGTATGATGATATATTCAAAGATGTAACGGTTAAAGATTATA
CTTATCAACGTACTTTCACAATGCAAGAGGTCATATATTTAAAGTACAACAACAATAAAGTGACACACTTTGTAGAAAGT
CTATTCGAAGATTACGGGAAAATATTCGGAAGAATGATAGGTGCACAATTAAAAAACTATCAAATAAGAGGGATTTTGAA
ATCTGCCTCTAGCGCATATGACGAAAAGAATATAGAAAAATTACAAGCGTTCACAAATAAATTATTCAATACTTTTAATA
AAAACCAACTAGCAATCGCGCCTTTGATAGAAGGTTTTGATTATGAGGAATTATCTAATGGTGGTAAGAATAGTAACATG
CCTTTTTCTGAATTGAGTGAGCTAATGAGAGATGCAATAAAAAATGTTGCGTTGATGATTGGTATACCCCCAGGTTTGAT
TTACGGAGAAACAGCTGATTTGGAAAAAAACACGCTTGTATTTGAGAAGTTCTGTTTAACACCTTTATTAAAAAAGATTC
AGAACGAATTAAACGCGAAACTCATAACTCAAAGCATGTATTTGAAAGATACAAGAATAGAAATTGTCGGTGTGAATAAA
AAAGACCCACTTCAATATGCTGAAGCAATTGACAAACTTGTAAGTTCTGGTTCATTTACAAGGAATGAGGTGCGGATTAT
GTTAGGTGAAGAACCGTCTGACAATCCTGAATTAGACGAATATCTAGTGACGAAGAACTACGAAAAAGCAAACGAAAATG
GTAGTACATTGAAAGGTGGTGATGAAGATGAAAGTGGAGATTAA

Upstream 100 bases:

>100_bases
TGTTCATGCGTTATATAGAGCGGATGATATAGTAGACAAAGACATGTCTAAAGCACTTGATGCATTAATGAGTATAGATT
TCTAATAGAGGAGGTGAGAC

Downstream 100 bases:

>100_bases
AGGCGTCATCGTTTCCAACGAAGATAAATGGGTTTACGAAATGCTTGGTATGGATTCGACTTGTCCTAAAGATGTTTTAA
CACAACTAGAATTTAGTGAT

Product: HK97 family phage portal protein

Products: NA

Alternate protein names: HK97 Family Phage Portal Protein; Phage Portal Protein HK

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSILEKIFKTRKDISYMLDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNRIQKNDVYYKLNIKPNTDLSS
DSFWQQVIYKLIYDNEVLIVVSDSKELLIADSFYREEYALYDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVES
LFEDYGKIFGRMIGAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNM
PFSELSELMRDAIKNVALMIGIPPGLIYGETADLEKNTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNK
KDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLVTKNYEKANENGSTLKGGDEDESGD

Sequences:

>Translated_387_residues
MSILEKIFKTRKDISYMLDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNRIQKNDVYYKLNIKPNTDLSS
DSFWQQVIYKLIYDNEVLIVVSDSKELLIADSFYREEYALYDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVES
LFEDYGKIFGRMIGAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNM
PFSELSELMRDAIKNVALMIGIPPGLIYGETADLEKNTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNK
KDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLVTKNYEKANENGSTLKGGDEDESGD
>Mature_386_residues
SILEKIFKTRKDISYMLDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNRIQKNDVYYKLNIKPNTDLSSD
SFWQQVIYKLIYDNEVLIVVSDSKELLIADSFYREEYALYDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESL
FEDYGKIFGRMIGAQLKNYQIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNMP
FSELSELMRDAIKNVALMIGIPPGLIYGETADLEKNTLVFEKFCLTPLLKKIQNELNAKLITQSMYLKDTRIEIVGVNKK
DPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDEYLVTKNYEKANENGSTLKGGDEDESGD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44504; Mature: 44373

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILEKIFKTRKDISYMLDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
IQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSKELLIADSFYREEYAL
EECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHHH
YDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMIGAQLKNY
HHHHHHCCCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHHCCCCCCCC
PFSELSELMRDAIKNVALMIGIPPGLIYGETADLEKNTLVFEKFCLTPLLKKIQNELNAK
CHHHHHHHHHHHHHCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDE
HHHHHHHEEECEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHH
YLVTKNYEKANENGSTLKGGDEDESGD
HHHHCCCHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SILEKIFKTRKDISYMLDLDMIEDLSQQAYVKRLAIDSCIEFVARAVAQSHFKVLEGNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
IQKNDVYYKLNIKPNTDLSSDSFWQQVIYKLIYDNEVLIVVSDSKELLIADSFYREEYAL
EECCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHHH
YDDIFKDVTVKDYTYQRTFTMQEVIYLKYNNNKVTHFVESLFEDYGKIFGRMIGAQLKNY
HHHHHHCCCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QIRGILKSASSAYDEKNIEKLQAFTNKLFNTFNKNQLAIAPLIEGFDYEELSNGGKNSNM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHHCCCCCCCC
PFSELSELMRDAIKNVALMIGIPPGLIYGETADLEKNTLVFEKFCLTPLLKKIQNELNAK
CHHHHHHHHHHHHHCEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LITQSMYLKDTRIEIVGVNKKDPLQYAEAIDKLVSSGSFTRNEVRIMLGEEPSDNPELDE
HHHHHHHEEECEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHH
YLVTKNYEKANENGSTLKGGDEDESGD
HHHHCCCHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA