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The map label for this gene is tnpC [H]

Identifier: 148268138

GI number: 148268138

Start: 1812410

End: 1812787

Strand: Reverse

Name: tnpC [H]

Synonym: SaurJH9_1715

Alternate gene names: 148268138

Gene position: 1812787-1812410 (Counterclockwise)

Preceding gene: 148268139

Following gene: 148268137

Centisome position: 62.37

GC content: 29.89

Gene sequence:

>378_bases
ATGGATAAACAAGTTAGAAATACAACAGAAATTGTACGTTTGGCGAAGCAGAAATCAAAAAAGACAAGGGAAAAAGTAGA
CAAAGCGATTTCTAAATTTTCGATTGAAGGTAAAGTTATTAATTTTAATTCAATAGCAAAGGAAGCTAATGTTTCTAAAT
CATGGCTTTATAAGGAACACGATATTAGGCAAAGAATCGAATCCCTTCGTGAGCGTCAAATAACAGCAAATGTAGTCTCA
AAACCCAAGAAAAGTTCTCGTTCGGAGGAAATCCTTATTAAAACCTTAAAAAGAAGAGTAATGGAATTAGAAAAAGAAAA
TAAAAAATTACAGAACCAAATTCAAAAATTATATGGAGATCTGTATAATAAAGAATAA

Upstream 100 bases:

>100_bases
CATAGCTAAGGATAAACAATGGCAAAGACAAGTAGAGACTAATAGCCGTGTTAAAGAGCGTTTAGAACAAATCATTGGAA
GTTTGACGGGGTAATTATCA

Downstream 100 bases:

>100_bases
TTATTAATCTGTAGACAAATTGTGAAAGGATGTACTTAAACGCTAACGGTCAGCTTTATTGAACAGTAATTTAAGTATAT
GTCCAATCTAGGGTAAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MDKQVRNTTEIVRLAKQKSKKTREKVDKAISKFSIEGKVINFNSIAKEANVSKSWLYKEHDIRQRIESLRERQITANVVS
KPKKSSRSEEILIKTLKRRVMELEKENKKLQNQIQKLYGDLYNKE

Sequences:

>Translated_125_residues
MDKQVRNTTEIVRLAKQKSKKTREKVDKAISKFSIEGKVINFNSIAKEANVSKSWLYKEHDIRQRIESLRERQITANVVS
KPKKSSRSEEILIKTLKRRVMELEKENKKLQNQIQKLYGDLYNKE
>Mature_125_residues
MDKQVRNTTEIVRLAKQKSKKTREKVDKAISKFSIEGKVINFNSIAKEANVSKSWLYKEHDIRQRIESLRERQITANVVS
KPKKSSRSEEILIKTLKRRVMELEKENKKLQNQIQKLYGDLYNKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14804; Mature: 14804

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQVRNTTEIVRLAKQKSKKTREKVDKAISKFSIEGKVINFNSIAKEANVSKSWLYKEH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCHHHHHHHHH
DIRQRIESLRERQITANVVSKPKKSSRSEEILIKTLKRRVMELEKENKKLQNQIQKLYGD
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYNKE
HHCCC
>Mature Secondary Structure
MDKQVRNTTEIVRLAKQKSKKTREKVDKAISKFSIEGKVINFNSIAKEANVSKSWLYKEH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCHHHHHHHHH
DIRQRIESLRERQITANVVSKPKKSSRSEEILIKTLKRRVMELEKENKKLQNQIQKLYGD
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYNKE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA