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The map label for this gene is yfiH [C]

Identifier: 148267679

GI number: 148267679

Start: 1291792

End: 1292583

Strand: Direct

Name: yfiH [C]

Synonym: SaurJH9_1246

Alternate gene names: 148267679

Gene position: 1291792-1292583 (Clockwise)

Preceding gene: 148267678

Following gene: 148267680

Centisome position: 44.44

GC content: 31.82

Gene sequence:

>792_bases
GTGAATGATAATTTTAAAAAGCAACCGCATCATTTAATATATGAAGAATTATTACAACAAGGTATTACTCTAGGTATTAC
AACTAGAGGAGATGGTTTAAGCGACTATCCTAAAAATGCTTTTAATATGGCGAGATATATTGATGATCGCCCATATAATA
TTACTCAACATCAATTGCAATTAGCTGAAGAAATTGCGTTTGATAGAAAAAATTGGGTGTTTCCCATCCAAACACATGAA
AATAAAGTCGCTTGTATTACAAAGGATGATATAGGCACAAATATAGACACTTTAACTGATGCGCTTCATGGTATTGATGC
GATGTACACATATGATAGTAATGTCTTATTAACGATGTGTTATGCAGACTGTGTACCAGTATATTTTTATAGTACAAAAC
ATCATTTTATTGCATTGGCGCATGCAGGTTGGCGTGGTACCTATACTGAAATTGTAAAAGAAGTGCTAAAACATGTGAAC
TTTGATTTGAAAGACTTACATGTCGTTATTGGACCATCTACATCATCAAGTTATGAAATTAATGATGATATTAAAAATAA
ATTTGAAACATTGCCAATTGATAGTGCCAACTATATTGAAACTAGAGGACGAGATCGTCATGGTATTGATTTGAAAAAAG
CCAATGCTGAATTATTAAATTATTATGGTGTTCCTAAAGAAAATATTTATACGACAGCGTATGCTACATCTGAACATTTA
GAATTATTTTTCTCTTATCGATTAGAAAAAGGTCAAACAGGACGCATGTTAGCATTCATTGGTCAACAGTAA

Upstream 100 bases:

>100_bases
GCGCAACATTTTAACTTTAAACATAAATGTTATATTATATAATTATTAACTTTGTACAGTTAGACGAAGATAATTTAAAT
GAAATGATGGTGACGATCGA

Downstream 100 bases:

>100_bases
ACAAGGAGGAGATATGTTTGCGTGTGAAAGATAATTTACAACAAATCTCAACACAAATTAATGACAAAAGTGAAAAAAAT
AATTTTTCAACAAAACCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMARYIDDRPYNITQHQLQLAEEIAFDRKNWVFPIQTHE
NKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMCYADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVN
FDLKDLHVVIGPSTSSSYEINDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAELLNYYGVPKENIYTTAYATSEHL
ELFFSYRLEKGQTGRMLAFIGQQ

Sequences:

>Translated_263_residues
MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMARYIDDRPYNITQHQLQLAEEIAFDRKNWVFPIQTHE
NKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMCYADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVN
FDLKDLHVVIGPSTSSSYEINDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAELLNYYGVPKENIYTTAYATSEHL
ELFFSYRLEKGQTGRMLAFIGQQ
>Mature_263_residues
MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMARYIDDRPYNITQHQLQLAEEIAFDRKNWVFPIQTHE
NKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMCYADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVN
FDLKDLHVVIGPSTSSSYEINDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAELLNYYGVPKENIYTTAYATSEHL
ELFFSYRLEKGQTGRMLAFIGQQ

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family

Homologues:

Organism=Escherichia coli, GI1788945, Length=251, Percent_Identity=25.0996015936255, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1030_STAAN (Q7A617)

Other databases:

- EMBL:   BA000018
- PIR:   F89890
- RefSeq:   NP_374303.1
- ProteinModelPortal:   Q7A617
- SMR:   Q7A617
- STRING:   Q7A617
- EnsemblBacteria:   EBSTAT00000002435
- GeneID:   1123861
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA1030
- eggNOG:   COG1496
- GeneTree:   EBGT00050000025304
- HOGENOM:   HBG751647
- OMA:   CFADCVP
- ProtClustDB:   CLSK885186
- BioCyc:   SAUR158879:SA1030-MONOMER
- InterPro:   IPR003730
- InterPro:   IPR011324
- Gene3D:   G3DSA:3.60.140.10
- TIGRFAMs:   TIGR00726

Pfam domain/function: PF02578 Cu-oxidase_4; SSF64438 Cytotoxic_necrot_fac-like_cat

EC number: NA

Molecular weight: Translated: 30257; Mature: 30257

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMARYIDDRPYNITQHQLQ
CCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH
LAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMC
HHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEE
YADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEI
HHHCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEE
NDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAELLNYYGVPKENIYTTAYATSEHL
CHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCEEEEEECCHHHH
ELFFSYRLEKGQTGRMLAFIGQQ
HHHEEHHHCCCCCCCEEEEECCC
>Mature Secondary Structure
MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMARYIDDRPYNITQHQLQ
CCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH
LAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMC
HHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEE
YADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEI
HHHCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEE
NDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAELLNYYGVPKENIYTTAYATSEHL
CHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHCCHHHHHHCCCCCCCEEEEEECCHHHH
ELFFSYRLEKGQTGRMLAFIGQQ
HHHEEHHHCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146