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The map label for this gene is ylbC [H]

Identifier: 148267611

GI number: 148267611

Start: 1222487

End: 1223524

Strand: Direct

Name: ylbC [H]

Synonym: SaurJH9_1178

Alternate gene names: 148267611

Gene position: 1222487-1223524 (Clockwise)

Preceding gene: 148267610

Following gene: 148267612

Centisome position: 42.06

GC content: 30.06

Gene sequence:

>1038_bases
ATGAAAAAGTTAATTATAAGAGTCGTCGGTGTATTATTTTTAGTTGGATTTTTAATATATCTTTTTTATTCACCGAGATT
AAAATTTGATGTATTAGAGAACCCGAATAAAGGTAATAAAGTAAATAGATCTGAACAGGTGAATAAATCAAATAACCATG
CTGAAAATCCAAAGCCTAAAGAAGGTGTTGGTACATGGGTAGGTAAAGATATTAAAGTGCTTACTTCTAAATTTGGACAA
GCAGATCGTGTCTACCCTTTTAGAGATGGTTACAAAAATTATGTGTTTAAAGACAAAAACAGTTATTACATTGTTTCAAC
TAAACGTGAAGAAATCGTTTCAGTGTATGCTACAGGTGAGAAAGTCAATGTTAGTCCGTTAAAAATAGGACAACATTCTG
CAGAAATTTTTAATCATACAAGTATTAATCCAGAACCTTCCTTTAAAGTTGATGGTAAAAAATATGAATTTGAACTTTCA
GATGAAGATTTAAAAACACAAACACTGATTAAATATGGCGACATATATGCACAAGTGTATTCTGATCAACAATCGAAAAA
GGTGCTAAGTGTACGATTTTTAACAAAAGAAATGTTAGCAGATATTGAACCTTATCAATTAAATTCTAATTCTACGTCAG
AAGAGCATAATAAGCGTCCAGTTGAGCAAAATCCAAATCAATTAATTTCTCTTTATGAAGTAACGAATGAAATGAGAAAA
TTAAAAGGATTAAAACCATTGAAAATCAATAGCGATTTAGCACATATTGCATCTAATAACTTATATGAAGCGACCTCTAA
TGGTTCTGATAGTGTTGAATTTACAGAGGACGCATTAAGAGGGCAATTAGATAAAAATCACGTTACTTATAAAACAACTG
CTCAAAATGTTGGTTATGCGTTTAATGATGTACCAACATTAATCCATAGTTGGATGAATTCAGATATACATCGATCTCGT
CTATTAAATTCAAAATACGATGAGATGGGTGGAGATGTAATGAGAGATTATTATTCACTAATTTTCTTAGAAAAATAA

Upstream 100 bases:

>100_bases
TTTGTTTTATCGAAACGACACAGTTATGTCAGTGTTGAAAATTTGCTAATTAATGTGTTGTTTTTTACAATAGTATTAAT
ACTTTTTAGGTGGTTGATTG

Downstream 100 bases:

>100_bases
CAATGAGGGGTATTTATGATTAATGAAGCTTCACTAGCGATATTAGATGATATTGATGAACTAGCTGATATGATAGTTGC
ATCAGATATTTATGCATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MKKLIIRVVGVLFLVGFLIYLFYSPRLKFDVLENPNKGNKVNRSEQVNKSNNHAENPKPKEGVGTWVGKDIKVLTSKFGQ
ADRVYPFRDGYKNYVFKDKNSYYIVSTKREEIVSVYATGEKVNVSPLKIGQHSAEIFNHTSINPEPSFKVDGKKYEFELS
DEDLKTQTLIKYGDIYAQVYSDQQSKKVLSVRFLTKEMLADIEPYQLNSNSTSEEHNKRPVEQNPNQLISLYEVTNEMRK
LKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAFNDVPTLIHSWMNSDIHRSR
LLNSKYDEMGGDVMRDYYSLIFLEK

Sequences:

>Translated_345_residues
MKKLIIRVVGVLFLVGFLIYLFYSPRLKFDVLENPNKGNKVNRSEQVNKSNNHAENPKPKEGVGTWVGKDIKVLTSKFGQ
ADRVYPFRDGYKNYVFKDKNSYYIVSTKREEIVSVYATGEKVNVSPLKIGQHSAEIFNHTSINPEPSFKVDGKKYEFELS
DEDLKTQTLIKYGDIYAQVYSDQQSKKVLSVRFLTKEMLADIEPYQLNSNSTSEEHNKRPVEQNPNQLISLYEVTNEMRK
LKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAFNDVPTLIHSWMNSDIHRSR
LLNSKYDEMGGDVMRDYYSLIFLEK
>Mature_345_residues
MKKLIIRVVGVLFLVGFLIYLFYSPRLKFDVLENPNKGNKVNRSEQVNKSNNHAENPKPKEGVGTWVGKDIKVLTSKFGQ
ADRVYPFRDGYKNYVFKDKNSYYIVSTKREEIVSVYATGEKVNVSPLKIGQHSAEIFNHTSINPEPSFKVDGKKYEFELS
DEDLKTQTLIKYGDIYAQVYSDQQSKKVLSVRFLTKEMLADIEPYQLNSNSTSEEHNKRPVEQNPNQLISLYEVTNEMRK
LKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAFNDVPTLIHSWMNSDIHRSR
LLNSKYDEMGGDVMRDYYSLIFLEK

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 39613; Mature: 39613

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIIRVVGVLFLVGFLIYLFYSPRLKFDVLENPNKGNKVNRSEQVNKSNNHAENPKPK
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCC
EGVGTWVGKDIKVLTSKFGQADRVYPFRDGYKNYVFKDKNSYYIVSTKREEIVSVYATGE
CCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEECHHHEEEEEECCC
KVNVSPLKIGQHSAEIFNHTSINPEPSFKVDGKKYEFELSDEDLKTQTLIKYGDIYAQVY
EECCCCEECCCHHHHHHHCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHH
SDQQSKKVLSVRFLTKEMLADIEPYQLNSNSTSEEHNKRPVEQNPNQLISLYEVTNEMRK
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHH
LKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYA
HCCCCCEEECCCHHHHHCCCCEECCCCCCCCCEECHHHHHCCCCCCCEEEEEECCCCCCC
FNDVPTLIHSWMNSDIHRSRLLNSKYDEMGGDVMRDYYSLIFLEK
HHHHHHHHHHHHCCHHHHHHHHCCHHHHHCHHHHHHHHHHHEECC
>Mature Secondary Structure
MKKLIIRVVGVLFLVGFLIYLFYSPRLKFDVLENPNKGNKVNRSEQVNKSNNHAENPKPK
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCC
EGVGTWVGKDIKVLTSKFGQADRVYPFRDGYKNYVFKDKNSYYIVSTKREEIVSVYATGE
CCCCHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEEEEECHHHEEEEEECCC
KVNVSPLKIGQHSAEIFNHTSINPEPSFKVDGKKYEFELSDEDLKTQTLIKYGDIYAQVY
EECCCCEECCCHHHHHHHCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHH
SDQQSKKVLSVRFLTKEMLADIEPYQLNSNSTSEEHNKRPVEQNPNQLISLYEVTNEMRK
CCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHH
LKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYA
HCCCCCEEECCCHHHHHCCCCEECCCCCCCCCEECHHHHHCCCCCCCEEEEEECCCCCCC
FNDVPTLIHSWMNSDIHRSRLLNSKYDEMGGDVMRDYYSLIFLEK
HHHHHHHHHHHHCCHHHHHHHHCCHHHHHCHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]