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The map label for this gene is ylbF [H]

Identifier: 148267612

GI number: 148267612

Start: 1223540

End: 1223974

Strand: Direct

Name: ylbF [H]

Synonym: SaurJH9_1179

Alternate gene names: 148267612

Gene position: 1223540-1223974 (Clockwise)

Preceding gene: 148267611

Following gene: 148267614

Centisome position: 42.09

GC content: 35.17

Gene sequence:

>435_bases
ATGATTAATGAAGCTTCACTAGCGATATTAGATGATATTGATGAACTAGCTGATATGATAGTTGCATCAGATATTTATGC
ATCATTTGAGCAAGCTAAACAGGCGCTCGAAAACAATGACGAAGCACATTTACTTTATCAATCATTTTTAAAATCAAAAG
AGAAATATGATGAAGTAATGCGTTTCGGGAAATATCATCCTGATTATAAGAAAGTCATGTTAGAGACAAGACAACGCAAA
AGAGCATATGAGATGCTTGACGTTGTGATGCATTACAAAGCTAGGGAAATGGCACTTCAACATTTAATTGATGAAGTTGT
TACGAAAATTGCGTACGCTGTTTCAGAGCATGTCAAAATAGAAACAGGTAATCCATTCTTTCAAACATCACATAGTGGTT
GTGCGACGGGCGGATCCTGTAATTGTTCATTATAA

Upstream 100 bases:

>100_bases
ATCTCGTCTATTAAATTCAAAATACGATGAGATGGGTGGAGATGTAATGAGAGATTATTATTCACTAATTTTCTTAGAAA
AATAACAATGAGGGGTATTT

Downstream 100 bases:

>100_bases
AAAACATCGAGTCAGAAAAAGGTGGTTATTGAAACCACTAACTAGCATCTGACTCGATGTTTTTATTTATTCGGGATTGT
TTGTTTGAATTGTTGTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MINEASLAILDDIDELADMIVASDIYASFEQAKQALENNDEAHLLYQSFLKSKEKYDEVMRFGKYHPDYKKVMLETRQRK
RAYEMLDVVMHYKAREMALQHLIDEVVTKIAYAVSEHVKIETGNPFFQTSHSGCATGGSCNCSL

Sequences:

>Translated_144_residues
MINEASLAILDDIDELADMIVASDIYASFEQAKQALENNDEAHLLYQSFLKSKEKYDEVMRFGKYHPDYKKVMLETRQRK
RAYEMLDVVMHYKAREMALQHLIDEVVTKIAYAVSEHVKIETGNPFFQTSHSGCATGGSCNCSL
>Mature_144_residues
MINEASLAILDDIDELADMIVASDIYASFEQAKQALENNDEAHLLYQSFLKSKEKYDEVMRFGKYHPDYKKVMLETRQRK
RAYEMLDVVMHYKAREMALQHLIDEVVTKIAYAVSEHVKIETGNPFFQTSHSGCATGGSCNCSL

Specific function: Regulates sporulation prior to stage II. Positively controls the competence regulator ComK at a post-transcriptional level. May modulate the translation, stability or activity of ComS. May work together with YmcA to regulate community development [H]

COG id: COG3679

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010368 [H]

Pfam domain/function: PF06133 DUF964 [H]

EC number: NA

Molecular weight: Translated: 16476; Mature: 16476

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINEASLAILDDIDELADMIVASDIYASFEQAKQALENNDEAHLLYQSFLKSKEKYDEVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RFGKYHPDYKKVMLETRQRKRAYEMLDVVMHYKAREMALQHLIDEVVTKIAYAVSEHVKI
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
ETGNPFFQTSHSGCATGGSCNCSL
CCCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINEASLAILDDIDELADMIVASDIYASFEQAKQALENNDEAHLLYQSFLKSKEKYDEVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RFGKYHPDYKKVMLETRQRKRAYEMLDVVMHYKAREMALQHLIDEVVTKIAYAVSEHVKI
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE
ETGNPFFQTSHSGCATGGSCNCSL
CCCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 10712692 [H]