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The map label for this gene is xtmB [H]

Identifier: 148267321

GI number: 148267321

Start: 937263

End: 938558

Strand: Direct

Name: xtmB [H]

Synonym: SaurJH9_0887

Alternate gene names: 148267321

Gene position: 937263-938558 (Clockwise)

Preceding gene: 148267320

Following gene: 148267322

Centisome position: 32.24

GC content: 33.64

Gene sequence:

>1296_bases
ATGTATGAAATACTTGATCTAAAAAATAAAATCGGTGGTGGCTACAATAAGTTTTGGCACAACAAAAACTTTTACCGTGT
TGTTAAAGGTTCAAGGGGTAGCAAGAAAAGTAAAACTACCGCTATTAATCTCATTTATCGAATAATGAAATATGATTGGG
CAAATATACTTGTAGTCAGAAGATTTAGCAACACTAACAAACAATCAACGTATACAGATTTAAAGTGGGCAACTAACCAA
TTAGGCGTTGCTCACTTATTTAAATTCAACGAAAGTTTGCCGGAAATAACGTATAAACCTACTGGACAAAAAATACTGTT
TAGAGGTTTAGACGACCCATTGAAAATAACATCGATTACTGTTGATACAGGCATTTTGTGTTGGGCTTGGTTTGAAGAGG
CTTATCAAATAGAAACATTCGCTAAGTTTAGCACTGTTGTTGAGTCAATACGTGGTAGCTACGATAGTCCGGAATTTTTC
AAGCAAATCACAGTCACTTTTAACCCGTGGTCGGAAAGACATTGGTTGAAGCCTACATTTTTTGATGAAGAAACAAAATT
AAACAATACTTTTTCAGATACAACAACTTATAGAGTTAATGAATGGCTAGATAAAGTCGATATTGAACGATATGAAGATT
TGTATATAAAGAATCCTAGACGTGCAAGAATCGTTTGTGATGGAGATTGGGGTGTTGCAGAGGGGCTTGTATTCGATAAT
TTTAAAGTGGAAGACTTTGATTGGTTTGAGGAGTTTAAAAGAACGCAAGAAATAACTCACGGAATGGATTTTGGATTTAG
TCAAGACCCTACAACAGTTGTTAGTACGGTTGTAGATTTAAAAAACAAAAAGTTATTCATCTATGATGAACACTATAAAA
AAGCGATGTTAACTGATGATATAAAACAAATGCTTATTAAAAAAGGATTAGGTGATGTAGATATTGCAGCTGATTATGGG
GCTGGTGGAGATAGAGTGATCAGTGAATTGAAATCTAAAGGGATTAAAGGTATAAGAAAAGCGTTGAAAGGCGCTAATAC
TATTTTACCAGGCATTCAATTCATTCAAGGCTTTGAAGTTATTATACACCCATCATGTGAACACGCTATTGAAGAGTTCA
ACACTTATACATTTGACCAAGATAATGATGGTAAGTGGTTGAACAAGCCTATAGATGCTAATAACCATATTATCGATGCA
TTGCGTTATAGTCTTGAGAAATATCATATCGTACGTAAAAAACGTAAAAAGAATATAGAAAGCAAAACAAAAGTAATTAA
ATCTCTAGGATTATAG

Upstream 100 bases:

>100_bases
TAGAGATGTTAGGTAGACATCACAAATTATTTACAGACAAACAAGAAGTCGACCACAAAATACCGATGTTTGTTGATAAT
ATTCCGGAAGATGATTAGTC

Downstream 100 bases:

>100_bases
GAGGGAACAAATGTTAAAGGCAAACGAATTTGAAACGGATACTGATTTACGAGAAAACAGAAATTACTTGTTTAACGATG
AAGCTAATGTTGTTTACACA

Product: PBSX family phage terminase large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MYEILDLKNKIGGGYNKFWHNKNFYRVVKGSRGSKKSKTTAINLIYRIMKYDWANILVVRRFSNTNKQSTYTDLKWATNQ
LGVAHLFKFNESLPEITYKPTGQKILFRGLDDPLKITSITVDTGILCWAWFEEAYQIETFAKFSTVVESIRGSYDSPEFF
KQITVTFNPWSERHWLKPTFFDEETKLNNTFSDTTTYRVNEWLDKVDIERYEDLYIKNPRRARIVCDGDWGVAEGLVFDN
FKVEDFDWFEEFKRTQEITHGMDFGFSQDPTTVVSTVVDLKNKKLFIYDEHYKKAMLTDDIKQMLIKKGLGDVDIAADYG
AGGDRVISELKSKGIKGIRKALKGANTILPGIQFIQGFEVIIHPSCEHAIEEFNTYTFDQDNDGKWLNKPIDANNHIIDA
LRYSLEKYHIVRKKRKKNIESKTKVIKSLGL

Sequences:

>Translated_431_residues
MYEILDLKNKIGGGYNKFWHNKNFYRVVKGSRGSKKSKTTAINLIYRIMKYDWANILVVRRFSNTNKQSTYTDLKWATNQ
LGVAHLFKFNESLPEITYKPTGQKILFRGLDDPLKITSITVDTGILCWAWFEEAYQIETFAKFSTVVESIRGSYDSPEFF
KQITVTFNPWSERHWLKPTFFDEETKLNNTFSDTTTYRVNEWLDKVDIERYEDLYIKNPRRARIVCDGDWGVAEGLVFDN
FKVEDFDWFEEFKRTQEITHGMDFGFSQDPTTVVSTVVDLKNKKLFIYDEHYKKAMLTDDIKQMLIKKGLGDVDIAADYG
AGGDRVISELKSKGIKGIRKALKGANTILPGIQFIQGFEVIIHPSCEHAIEEFNTYTFDQDNDGKWLNKPIDANNHIIDA
LRYSLEKYHIVRKKRKKNIESKTKVIKSLGL
>Mature_431_residues
MYEILDLKNKIGGGYNKFWHNKNFYRVVKGSRGSKKSKTTAINLIYRIMKYDWANILVVRRFSNTNKQSTYTDLKWATNQ
LGVAHLFKFNESLPEITYKPTGQKILFRGLDDPLKITSITVDTGILCWAWFEEAYQIETFAKFSTVVESIRGSYDSPEFF
KQITVTFNPWSERHWLKPTFFDEETKLNNTFSDTTTYRVNEWLDKVDIERYEDLYIKNPRRARIVCDGDWGVAEGLVFDN
FKVEDFDWFEEFKRTQEITHGMDFGFSQDPTTVVSTVVDLKNKKLFIYDEHYKKAMLTDDIKQMLIKKGLGDVDIAADYG
AGGDRVISELKSKGIKGIRKALKGANTILPGIQFIQGFEVIIHPSCEHAIEEFNTYTFDQDNDGKWLNKPIDANNHIIDA
LRYSLEKYHIVRKKRKKNIESKTKVIKSLGL

Specific function: Functions as a terminase [H]

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaT and phage SPP1 terminase large subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 50170; Mature: 50170

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEILDLKNKIGGGYNKFWHNKNFYRVVKGSRGSKKSKTTAINLIYRIMKYDWANILVVR
CCCHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
RFSNTNKQSTYTDLKWATNQLGVAHLFKFNESLPEITYKPTGQKILFRGLDDPLKITSIT
ECCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCEECCCCCEEEEECCCCCEEEEEEE
VDTGILCWAWFEEAYQIETFAKFSTVVESIRGSYDSPEFFKQITVTFNPWSERHWLKPTF
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCCCCCCCCC
FDEETKLNNTFSDTTTYRVNEWLDKVDIERYEDLYIKNPRRARIVCDGDWGVAEGLVFDN
CCCHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCEEECC
FKVEDFDWFEEFKRTQEITHGMDFGFSQDPTTVVSTVVDLKNKKLFIYDEHYKKAMLTDD
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHH
IKQMLIKKGLGDVDIAADYGAGGDRVISELKSKGIKGIRKALKGANTILPGIQFIQGFEV
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCEE
IIHPSCEHAIEEFNTYTFDQDNDGKWLNKPIDANNHIIDALRYSLEKYHIVRKKRKKNIE
EECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
SKTKVIKSLGL
HHHHHHHHHCC
>Mature Secondary Structure
MYEILDLKNKIGGGYNKFWHNKNFYRVVKGSRGSKKSKTTAINLIYRIMKYDWANILVVR
CCCHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
RFSNTNKQSTYTDLKWATNQLGVAHLFKFNESLPEITYKPTGQKILFRGLDDPLKITSIT
ECCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCEECCCCCEEEEECCCCCEEEEEEE
VDTGILCWAWFEEAYQIETFAKFSTVVESIRGSYDSPEFFKQITVTFNPWSERHWLKPTF
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCCCCCCCCC
FDEETKLNNTFSDTTTYRVNEWLDKVDIERYEDLYIKNPRRARIVCDGDWGVAEGLVFDN
CCCHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCEEECC
FKVEDFDWFEEFKRTQEITHGMDFGFSQDPTTVVSTVVDLKNKKLFIYDEHYKKAMLTDD
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHH
IKQMLIKKGLGDVDIAADYGAGGDRVISELKSKGIKGIRKALKGANTILPGIQFIQGFEV
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCEE
IIHPSCEHAIEEFNTYTFDQDNDGKWLNKPIDANNHIIDALRYSLEKYHIVRKKRKKNIE
EECCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
SKTKVIKSLGL
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 8083174 [H]