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The map label for this gene is 148267320

Identifier: 148267320

GI number: 148267320

Start: 936766

End: 937260

Strand: Direct

Name: 148267320

Synonym: SaurJH9_0886

Alternate gene names: NA

Gene position: 936766-937260 (Clockwise)

Preceding gene: 148267319

Following gene: 148267321

Centisome position: 32.23

GC content: 36.57

Gene sequence:

>495_bases
ATGAACAAATTAACTAAAAAGCAACGTTTGTTTGCAGAAGTATATACAATACCTGGTACTGAATGTTATGGCAATGCTAC
TAAGTCAGCTGTGCATGCCGGATATAGCGAAAAGACGGCGTACTCACAAGGACAGCGTATGTTGAAGAATGTTGAAATTC
AGAATTATATCAAGGAGGTTGAAACAAAACTCTTTGACGAGAATATTATGTCAGGTAAAGAAGTGTTGTATAGGCTAACT
AGAACAGCTAGAGGAGAACACACGGAAGTTGAAGCTGTCGTAACAAAAACTGGAGACTATAAAGAGAATCCGGATACTGG
CAAAATGCAATTAGTATACGATGAACACATACAACTTGTTACTAAGTCACCTAAAATAAGTGACCAAAACAAAGCCTTAG
AGATGTTAGGTAGACATCACAAATTATTTACAGACAAACAAGAAGTCGACCACAAAATACCGATGTTTGTTGATAATATT
CCGGAAGATGATTAG

Upstream 100 bases:

>100_bases
TCGCAATTAGGAATAAAGGATCTATGTGGGTTGGCTGATTATAGCCAATCCCTTTTTTAATTTTAAAAAGCGTATAGCGC
GAGAGTTGGTGGTAAATGAA

Downstream 100 bases:

>100_bases
TCATGTATGAAATACTTGATCTAAAAAATAAAATCGGTGGTGGCTACAATAAGTTTTGGCACAACAAAAACTTTTACCGT
GTTGTTAAAGGTTCAAGGGG

Product: terminase small subunit

Products: NA

Alternate protein names: Phage Terminase Small Subunit; Phage Terminase Family Protein; Prophage; Terminase Superantigen-Encoding Pathogenicity Islands SaPI; Small Terminase

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNKLTKKQRLFAEVYTIPGTECYGNATKSAVHAGYSEKTAYSQGQRMLKNVEIQNYIKEVETKLFDENIMSGKEVLYRLT
RTARGEHTEVEAVVTKTGDYKENPDTGKMQLVYDEHIQLVTKSPKISDQNKALEMLGRHHKLFTDKQEVDHKIPMFVDNI
PEDD

Sequences:

>Translated_164_residues
MNKLTKKQRLFAEVYTIPGTECYGNATKSAVHAGYSEKTAYSQGQRMLKNVEIQNYIKEVETKLFDENIMSGKEVLYRLT
RTARGEHTEVEAVVTKTGDYKENPDTGKMQLVYDEHIQLVTKSPKISDQNKALEMLGRHHKLFTDKQEVDHKIPMFVDNI
PEDD
>Mature_164_residues
MNKLTKKQRLFAEVYTIPGTECYGNATKSAVHAGYSEKTAYSQGQRMLKNVEIQNYIKEVETKLFDENIMSGKEVLYRLT
RTARGEHTEVEAVVTKTGDYKENPDTGKMQLVYDEHIQLVTKSPKISDQNKALEMLGRHHKLFTDKQEVDHKIPMFVDNI
PEDD

Specific function: Unknown

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18870; Mature: 18870

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLTKKQRLFAEVYTIPGTECYGNATKSAVHAGYSEKTAYSQGQRMLKNVEIQNYIKEV
CCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ETKLFDENIMSGKEVLYRLTRTARGEHTEVEAVVTKTGDYKENPDTGKMQLVYDEHIQLV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECHHHEE
TKSPKISDQNKALEMLGRHHKLFTDKQEVDHKIPMFVDNIPEDD
ECCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHCCCCCCCC
>Mature Secondary Structure
MNKLTKKQRLFAEVYTIPGTECYGNATKSAVHAGYSEKTAYSQGQRMLKNVEIQNYIKEV
CCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ETKLFDENIMSGKEVLYRLTRTARGEHTEVEAVVTKTGDYKENPDTGKMQLVYDEHIQLV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECHHHEE
TKSPKISDQNKALEMLGRHHKLFTDKQEVDHKIPMFVDNIPEDD
ECCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA