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The map label for this gene is yurY [H]

Identifier: 148267277

GI number: 148267277

Start: 914971

End: 915732

Strand: Direct

Name: yurY [H]

Synonym: SaurJH9_0843

Alternate gene names: 148267277

Gene position: 914971-915732 (Clockwise)

Preceding gene: 148267275

Following gene: 148267278

Centisome position: 31.48

GC content: 33.86

Gene sequence:

>762_bases
ATGGCATCAACATTAGAAATCAAAGACCTACATGTGTCTATTGAGGATAAAGAAATCTTAAAAGGTGTTAACTTGACAAT
TAACACTGATGAAATACATGCGATTATGGGACCAAACGGGACAGGTAAATCAACTTTATCATCTGCAATTATGGGACACC
CAAGCTATGAAGTAACTAAAGGAGAAGTACTTTTAGACGGTGTAAATATTTTAGAATTAGAAGTTGATGAAAGAGCAAAA
GCAGGATTATTCTTGGCAATGCAATATCCATCAGAAATTACAGGTGTTACAAATGCTGATTTCATGCGTTCAGCAATCAA
TGCGAAACGTGAAGAAGGACAAGAAATCAACTTAATGCAATTTATTAAGAAATTAGATAAAAACATGGATTTTCTAGACA
TAGATAAAGACATGGCACAACGTTATTTAAATGAAGGTTTCTCAGGTGGAGAGAAGAAACGTAACGAAATCTTACAATTA
ATGATGTTAGAACCTAAGTTTGCAATCTTAGATGAAATCGATTCAGGGTTAGACATCGATGCATTAAAAGTTGTATCTAA
AGGTATTAACCAAATGCGTGGGGAAAACTTTGGTGCATTAATGATTACACACTATCAACGATTATTAAATTACATTACTC
CTGATAAAGTACATGTAATGTATGCTGGTAAAGTCGTTAAATCTGGTGGTCCAGAATTAGCAAAACGTCTTGAAGAAGAA
GGATATGAATGGGTTAAAGAAGAGTTCGGTTCAGCTGAATAA

Upstream 100 bases:

>100_bases
ATAATTAACTGAACGCATTATTACAAAGTCTTTTTGACTACAAATTAAAATTATTATAAACTAGTTAAGAAAACTTTATA
TTTTACGGAGGGAATATAAA

Downstream 100 bases:

>100_bases
TCTTATTAATACAGTATCCATGAGATGTTCATCTATATATGATGAAAATGAACATTTATACGAAATAGTAAATTTCATCA
AGTAGGAGGAAAAAGTTATG

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAK
AGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQL
MMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGPELAKRLEEE
GYEWVKEEFGSAE

Sequences:

>Translated_253_residues
MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAK
AGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQL
MMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGPELAKRLEEE
GYEWVKEEFGSAE
>Mature_252_residues
ASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMGHPSYEVTKGEVLLDGVNILELEVDERAKA
GLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLM
MLEPKFAILDEIDSGLDIDALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGPELAKRLEEEG
YEWVKEEFGSAE

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI255708477, Length=230, Percent_Identity=28.695652173913, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI9961250, Length=251, Percent_Identity=27.8884462151394, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI9961252, Length=251, Percent_Identity=27.8884462151394, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI4505771, Length=251, Percent_Identity=27.8884462151394, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787972, Length=246, Percent_Identity=52.4390243902439, Blast_Score=263, Evalue=6e-72,
Organism=Escherichia coli, GI1787759, Length=245, Percent_Identity=29.7959183673469, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1788761, Length=234, Percent_Identity=25.2136752136752, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789593, Length=237, Percent_Identity=24.8945147679325, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787029, Length=245, Percent_Identity=24.4897959183673, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787500, Length=248, Percent_Identity=29.8387096774194, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786654, Length=248, Percent_Identity=24.1935483870968, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787143, Length=219, Percent_Identity=25.5707762557078, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI87081709, Length=231, Percent_Identity=20.7792207792208, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1790525, Length=219, Percent_Identity=30.5936073059361, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=228, Percent_Identity=29.8245614035088, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193209708, Length=235, Percent_Identity=28.0851063829787, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17565938, Length=239, Percent_Identity=27.6150627615063, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI193202349, Length=239, Percent_Identity=29.7071129707113, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI212646699, Length=229, Percent_Identity=29.2576419213974, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17543740, Length=238, Percent_Identity=27.3109243697479, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17541710, Length=218, Percent_Identity=27.0642201834862, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=219, Percent_Identity=28.310502283105, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17567269, Length=243, Percent_Identity=28.3950617283951, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115535101, Length=239, Percent_Identity=28.4518828451883, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17567265, Length=218, Percent_Identity=27.9816513761468, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=233, Percent_Identity=26.6094420600858, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17533971, Length=241, Percent_Identity=27.3858921161826, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24653245, Length=217, Percent_Identity=29.9539170506912, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281363262, Length=217, Percent_Identity=29.9539170506912, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI85726357, Length=256, Percent_Identity=26.5625, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24659289, Length=229, Percent_Identity=26.6375545851528, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28276; Mature: 28145

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMGHPSYEVTK
CCCCEEEEEEEEEECHHHHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCEECC
GEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQ
CCEEECCCEEEEEEECCCCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCCCCHHH
FIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDID
HHHHHHCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHH
ALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGPELAKRLEEE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCHHHHHHHHHH
GYEWVKEEFGSAE
HHHHHHHHCCCCC
>Mature Secondary Structure 
ASTLEIKDLHVSIEDKEILKGVNLTINTDEIHAIMGPNGTGKSTLSSAIMGHPSYEVTK
CCCEEEEEEEEEECHHHHHCCCCEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCEECC
GEVLLDGVNILELEVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQ
CCEEECCCEEEEEEECCCCCCCEEEEEECCCHHCCCCCHHHHHHHHHHHHHCCCCCCHHH
FIKKLDKNMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDID
HHHHHHCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCHH
ALKVVSKGINQMRGENFGALMITHYQRLLNYITPDKVHVMYAGKVVKSGGPELAKRLEEE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCHHHHHHHHHH
GYEWVKEEFGSAE
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]