Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
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Accession | NC_009487 |
Length | 2,906,700 |
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The map label for this gene is pgk
Identifier: 148267233
GI number: 148267233
Start: 875658
End: 876848
Strand: Direct
Name: pgk
Synonym: SaurJH9_0798
Alternate gene names: 148267233
Gene position: 875658-876848 (Clockwise)
Preceding gene: 148267232
Following gene: 148267234
Centisome position: 30.13
GC content: 34.68
Gene sequence:
>1191_bases ATGGCTAAAAAAATTGTTTCTGATTTAGATCTTAAAGGTAAAACAGTCCTAGTACGTGCTGATTTTAACGTACCTTTAAA AGACGGTGAAATTACTAATGACAACCGTATCGTTCAAGCTTTACCTACAATTCAATACATCATCGAACAAGGTGGTAAAA TCGTACTATTTTCACATTTAGGTAAAGTGAAAGAAGAAAGTGATAAAGCAAAATTAACTTTACGTCCAGTTGCTGAAGAC TTATCTAAGAAATTAGATAAAGAAGTTGTTTTCGTACCAGAAACACGCGGCGAAAAACTTGAAGCTGCTATTAAAGACCT TAAAGAAGGCGACGTATTATTAGTTGAAAATACACGTTATGAAGATTTAGACGGTAAAAAAGAATCTAAAAATGATCCAG AATTAGGTAAATACTGGGCATCTTTAGGTGATGTGTTTGTAAATGATGCTTTTGGTACTGCGCATCGTGAGCATGCATCT AATGTTGGTATTTCTACACATTTAGAAACTGCAGCTGGATTCTTAATGGATAAAGAAATTAAGTTTATTGGTGGCGTAGT TAACGATCCACATAAACCAGTTGTTGCTATTTTAGGTGGAGCAAAAGTATCTGACAAAATTAATGTCATCAAAAACTTAG TTAACATAGCTGATAAAATTATCATCGGCGGAGGTATGGCTTATACTTTCTTAAAAGCGCAAGGTAAAGAAATTGGTATT TCATTATTAGAAGAAGATAAAATCGACTTCGCAAAAGATTTATTAGAAAAACATGGTGATAAAATTGTATTACCAGTAGA CACTAAAGTTGCTAAAGAATTTTCTAATGATGCCAAAATCACTGTAGTACCATCTGATTCAATTCCAGCAGACCAAGAAG GTATGGATATTGGACCAAACACTGTAAAATTATTTGCAGATGAATTAGAAGGTGCGCACACTGTTGTATGGAATGGACCT ATGGGTGTATTCGAGTTCAGTAACTTTGCACAAGGTACAATTGGTGTATGTAAAGCAATTGCAAACCTTAAAGATGCAAT TACGATTATCGGTGGCGGTGATTCAGCTGCAGCAGCAATCTCTTTAGGTTTTGAAAATGACTTCACTCATATTTCAACTG GTGGCGGCGCGTCATTAGAGTACCTAGAAGGTAAAGAATTGCCTGGTATCAAAGCAATCAATAATAAATAA
Upstream 100 bases:
>100_bases AACTATTTAGCATTAATTAAAGCTTATGAGTAAGCGGGGAGCACAAACGCTTCTCCGCTTATTTTTATATAAAATTTCCT AATTACAAGGAGGAAACACC
Downstream 100 bases:
>100_bases TAAAGTGATAGTTTAAAGTGATGTGGCATGTTTGTTTAACATTGTTACGGGAAAACAGTCACAAGATGACATCGTGTTTC ATCACTTTTCAAAAATATTT
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGGKIVLFSHLGKVKEESDKAKLTLRPVAED LSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRYEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHAS NVGISTHLETAAGFLMDKEIKFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGI SLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQEGMDIGPNTVKLFADELEGAHTVVWNGP MGVFEFSNFAQGTIGVCKAIANLKDAITIIGGGDSAAAAISLGFENDFTHISTGGGASLEYLEGKELPGIKAINNK
Sequences:
>Translated_396_residues MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGGKIVLFSHLGKVKEESDKAKLTLRPVAED LSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRYEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHAS NVGISTHLETAAGFLMDKEIKFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGI SLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQEGMDIGPNTVKLFADELEGAHTVVWNGP MGVFEFSNFAQGTIGVCKAIANLKDAITIIGGGDSAAAAISLGFENDFTHISTGGGASLEYLEGKELPGIKAINNK >Mature_395_residues AKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGGKIVLFSHLGKVKEESDKAKLTLRPVAEDL SKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRYEDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASN VGISTHLETAAGFLMDKEIKFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGIS LLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQEGMDIGPNTVKLFADELEGAHTVVWNGPM GVFEFSNFAQGTIGVCKAIANLKDAITIIGGGDSAAAAISLGFENDFTHISTGGGASLEYLEGKELPGIKAINNK
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family
Homologues:
Organism=Homo sapiens, GI4505763, Length=406, Percent_Identity=44.0886699507389, Blast_Score=319, Evalue=3e-87, Organism=Homo sapiens, GI31543397, Length=415, Percent_Identity=42.6506024096386, Blast_Score=309, Evalue=2e-84, Organism=Escherichia coli, GI1789294, Length=392, Percent_Identity=43.8775510204082, Blast_Score=303, Evalue=1e-83, Organism=Caenorhabditis elegans, GI17508823, Length=413, Percent_Identity=47.2154963680387, Blast_Score=345, Evalue=2e-95, Organism=Saccharomyces cerevisiae, GI6319857, Length=413, Percent_Identity=46.0048426150121, Blast_Score=325, Evalue=6e-90, Organism=Drosophila melanogaster, GI24581203, Length=410, Percent_Identity=43.1707317073171, Blast_Score=305, Evalue=5e-83, Organism=Drosophila melanogaster, GI17136394, Length=409, Percent_Identity=43.520782396088, Blast_Score=302, Evalue=2e-82,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): PGK_STAA1 (A7WZS6)
Other databases:
- EMBL: AP009324 - RefSeq: YP_001441360.1 - ProteinModelPortal: A7WZS6 - STRING: A7WZS6 - EnsemblBacteria: EBSTAT00000004778 - GeneID: 5559411 - GenomeReviews: AP009324_GR - KEGG: saw:SAHV_0770 - eggNOG: COG0126 - GeneTree: EBGT00050000025307 - HOGENOM: HBG453500 - OMA: NCAIILP - ProtClustDB: PRK00073 - BioCyc: SAUR418127:SAHV_0770-MONOMER - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00145 - InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 - Gene3D: G3DSA:3.40.50.1270 - Gene3D: G3DSA:3.40.50.1260 - PANTHER: PTHR11406 - PIRSF: PIRSF000724 - PRINTS: PR00477
Pfam domain/function: PF00162 PGK; SSF53748 PGK
EC number: =2.7.2.3
Molecular weight: Translated: 42602; Mature: 42471
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: BINDING 36-36 BINDING 119-119 BINDING 156-156 BINDING 206-206 BINDING 294-294 BINDING 325-325
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGGKIVLFSHL CCCHHHHHCCCCCCEEEEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCEEEEECC GKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRY CCHHCCCCCCEEEEHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCC EDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLETAAGFLMDKEI CCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHCCCCCEEHHHHHHHHHHCCCH KFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGI HEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCEECE SLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQEGMDIGPN EEECCCCHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC TVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANLKDAITIIGGGDSAAAAI HHEEEHHHCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEE SLGFENDFTHISTGGGASLEYLEGKELPGIKAINNK EECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure AKKIVSDLDLKGKTVLVRADFNVPLKDGEITNDNRIVQALPTIQYIIEQGGKIVLFSHL CCHHHHHCCCCCCEEEEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCEEEEECC GKVKEESDKAKLTLRPVAEDLSKKLDKEVVFVPETRGEKLEAAIKDLKEGDVLLVENTRY CCHHCCCCCCEEEEHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCC EDLDGKKESKNDPELGKYWASLGDVFVNDAFGTAHREHASNVGISTHLETAAGFLMDKEI CCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCHHHHHHCCCCCEEHHHHHHHHHHCCCH KFIGGVVNDPHKPVVAILGGAKVSDKINVIKNLVNIADKIIIGGGMAYTFLKAQGKEIGI HEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCEECE SLLEEDKIDFAKDLLEKHGDKIVLPVDTKVAKEFSNDAKITVVPSDSIPADQEGMDIGPN EEECCCCHHHHHHHHHHCCCEEEEECCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC TVKLFADELEGAHTVVWNGPMGVFEFSNFAQGTIGVCKAIANLKDAITIIGGGDSAAAAI HHEEEHHHCCCCEEEEECCCCCEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCEEEE SLGFENDFTHISTGGGASLEYLEGKELPGIKAINNK EECCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA