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The map label for this gene is yhdP [H]

Identifier: 148267162

GI number: 148267162

Start: 793734

End: 795083

Strand: Direct

Name: yhdP [H]

Synonym: SaurJH9_0726

Alternate gene names: 148267162

Gene position: 793734-795083 (Clockwise)

Preceding gene: 148267161

Following gene: 148267163

Centisome position: 27.31

GC content: 32.44

Gene sequence:

>1350_bases
TTGGAAACTTCGACCATAATTAGTTTGATTATATTTATTCTATTAATTGCATTAACCACTGTATTTGTTGGTTCAGAATT
TGCATTAGTAAAAATTAGAGCAACAAGAATTGAACAGCTAGCAGATGAAGGAAATAAACCTGCTAAAATAGTAAAAAAGA
TGATTGCTAATCTAGATTATTATCTTTCTGCTTGTCAGTTAGGTATAACAGTAACATCTTTAGGGTTAGGTTGGCTTGGT
GAACCAACGTTTGAAAAGCTATTACACCCGATATTTGAAGCAATCAATTTACCAACTGCATTAACGACGACGATTTCGTT
TGCAGTGTCATTTATAATCGTTACGTATTTGCATGTAGTACTTGGTGAATTAGCGCCTAAATCTATAGCGATTCAACATA
CTGAAAAGCTTGCTTTAGTATATGCAAGACCATTGTTCTATTTCGGTAACATTATGAAACCATTGATTTGGCTGATGAAT
GGTTCTGCACGTGTTATTATTAGAATGTTTGGTGTAAATCCTGATGCCCAAACTGATGCAATGTCAGAAGAAGAAATCAA
AATTATTATTAACAATAGTTATAATGGTGGAGAAATCAACCAAACTGAATTGGCATATATGCAAAATATCTTTTCATTCG
ATGAAAGACATGCAAAAGATATAATGGTACCTAGAACTCAAATGATTACACTAAATGAACCTTTTAATGTAGACGAATTA
CTAGAAACAATAAAAGAACATCAATTTACGCGTTATCCAATTACTGATGATGGTGATAAAGACCACATTAAAGGATTTAT
TAACGTCAAAGAATTTTTAACTGAATACGCTTCTGGAAAAACGATTAAAATAGCAAACTATATACATGAGTTGCCAATGA
TTTCAGAGACAACACGTATCAGTGATGCATTAATTAGAATGCAACGTGAACATGTACATATGAGTCTTATTATAGATGAA
TATGGTGGAACGGCAGGTATTTTAACGATGGAAGATATTTTAGAAGAAATCGTTGGAGAAATTCGTGATGAATTTGATGA
TGATGAAGTGAATGATATCGTTAAAATTGATAATAAGACATTCCAAGTAAATGGCAGAGTACTATTGGATGATTTAACTG
AAGAGTTCGGTATAGAATTTGATGACTCTGAGGATATTGATACGATAGGTGGATGGTTACAATCTCGTAATACCAATTTA
CAAAAAGATGATTACGTGGATACAACTTATGATCGCTGGGTTGTTTCAGAAATCGATAACCACCAAATTATTTGGGTGAT
ATTAAACTATGAATTTAATGAAGCGAGACCTACTATCGGACAGTCTGATGAAGATGAAAAATCAGAATAG

Upstream 100 bases:

>100_bases
CATGTAGTTGTAATTTAAGTCATAGTGATAAATTTGAATGCGTGTTACCCATGAGTGACACATATAACATGGAGGTGAAT
CCCTAGAAATAGGGAATTAA

Downstream 100 bases:

>100_bases
ATATTAATATATAAACCAACTAAGAATGATTTAATTCATTTTTGGTTGGTTATTTTTTTGACTAAAATTAATGAAAAGTG
AAAATAGTATTGGAACTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
METSTIISLIIFILLIALTTVFVGSEFALVKIRATRIEQLADEGNKPAKIVKKMIANLDYYLSACQLGITVTSLGLGWLG
EPTFEKLLHPIFEAINLPTALTTTISFAVSFIIVTYLHVVLGELAPKSIAIQHTEKLALVYARPLFYFGNIMKPLIWLMN
GSARVIIRMFGVNPDAQTDAMSEEEIKIIINNSYNGGEINQTELAYMQNIFSFDERHAKDIMVPRTQMITLNEPFNVDEL
LETIKEHQFTRYPITDDGDKDHIKGFINVKEFLTEYASGKTIKIANYIHELPMISETTRISDALIRMQREHVHMSLIIDE
YGGTAGILTMEDILEEIVGEIRDEFDDDEVNDIVKIDNKTFQVNGRVLLDDLTEEFGIEFDDSEDIDTIGGWLQSRNTNL
QKDDYVDTTYDRWVVSEIDNHQIIWVILNYEFNEARPTIGQSDEDEKSE

Sequences:

>Translated_449_residues
METSTIISLIIFILLIALTTVFVGSEFALVKIRATRIEQLADEGNKPAKIVKKMIANLDYYLSACQLGITVTSLGLGWLG
EPTFEKLLHPIFEAINLPTALTTTISFAVSFIIVTYLHVVLGELAPKSIAIQHTEKLALVYARPLFYFGNIMKPLIWLMN
GSARVIIRMFGVNPDAQTDAMSEEEIKIIINNSYNGGEINQTELAYMQNIFSFDERHAKDIMVPRTQMITLNEPFNVDEL
LETIKEHQFTRYPITDDGDKDHIKGFINVKEFLTEYASGKTIKIANYIHELPMISETTRISDALIRMQREHVHMSLIIDE
YGGTAGILTMEDILEEIVGEIRDEFDDDEVNDIVKIDNKTFQVNGRVLLDDLTEEFGIEFDDSEDIDTIGGWLQSRNTNL
QKDDYVDTTYDRWVVSEIDNHQIIWVILNYEFNEARPTIGQSDEDEKSE
>Mature_449_residues
METSTIISLIIFILLIALTTVFVGSEFALVKIRATRIEQLADEGNKPAKIVKKMIANLDYYLSACQLGITVTSLGLGWLG
EPTFEKLLHPIFEAINLPTALTTTISFAVSFIIVTYLHVVLGELAPKSIAIQHTEKLALVYARPLFYFGNIMKPLIWLMN
GSARVIIRMFGVNPDAQTDAMSEEEIKIIINNSYNGGEINQTELAYMQNIFSFDERHAKDIMVPRTQMITLNEPFNVDEL
LETIKEHQFTRYPITDDGDKDHIKGFINVKEFLTEYASGKTIKIANYIHELPMISETTRISDALIRMQREHVHMSLIIDE
YGGTAGILTMEDILEEIVGEIRDEFDDDEVNDIVKIDNKTFQVNGRVLLDDLTEEFGIEFDDSEDIDTIGGWLQSRNTNL
QKDDYVDTTYDRWVVSEIDNHQIIWVILNYEFNEARPTIGQSDEDEKSE

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=396, Percent_Identity=88.3838383838384, Blast_Score=732, Evalue=0.0,
Organism=Escherichia coli, GI1790664, Length=420, Percent_Identity=25.2380952380952, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI145693175, Length=377, Percent_Identity=24.1379310344828, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1786879, Length=262, Percent_Identity=29.7709923664122, Blast_Score=115, Evalue=7e-27,
Organism=Escherichia coli, GI87082033, Length=282, Percent_Identity=25.177304964539, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1788119, Length=264, Percent_Identity=22.7272727272727, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324512, Length=354, Percent_Identity=22.0338983050847, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 51151; Mature: 51151

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSTIISLIIFILLIALTTVFVGSEFALVKIRATRIEQLADEGNKPAKIVKKMIANLDY
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YLSACQLGITVTSLGLGWLGEPTFEKLLHPIFEAINLPTALTTTISFAVSFIIVTYLHVV
HHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LGELAPKSIAIQHTEKLALVYARPLFYFGNIMKPLIWLMNGSARVIIRMFGVNPDAQTDA
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
MSEEEIKIIINNSYNGGEINQTELAYMQNIFSFDERHAKDIMVPRTQMITLNEPFNVDEL
CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH
LETIKEHQFTRYPITDDGDKDHIKGFINVKEFLTEYASGKTIKIANYIHELPMISETTRI
HHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCCHHHHH
SDALIRMQREHVHMSLIIDEYGGTAGILTMEDILEEIVGEIRDEFDDDEVNDIVKIDNKT
HHHHHHHHHHHEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHEEECCEE
FQVNGRVLLDDLTEEFGIEFDDSEDIDTIGGWLQSRNTNLQKDDYVDTTYDRWVVSEIDN
EEECCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCC
HQIIWVILNYEFNEARPTIGQSDEDEKSE
CEEEEEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
METSTIISLIIFILLIALTTVFVGSEFALVKIRATRIEQLADEGNKPAKIVKKMIANLDY
CCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHH
YLSACQLGITVTSLGLGWLGEPTFEKLLHPIFEAINLPTALTTTISFAVSFIIVTYLHVV
HHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LGELAPKSIAIQHTEKLALVYARPLFYFGNIMKPLIWLMNGSARVIIRMFGVNPDAQTDA
HHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC
MSEEEIKIIINNSYNGGEINQTELAYMQNIFSFDERHAKDIMVPRTQMITLNEPFNVDEL
CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHH
LETIKEHQFTRYPITDDGDKDHIKGFINVKEFLTEYASGKTIKIANYIHELPMISETTRI
HHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCCCCHHHHH
SDALIRMQREHVHMSLIIDEYGGTAGILTMEDILEEIVGEIRDEFDDDEVNDIVKIDNKT
HHHHHHHHHHHEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCHHEEECCEE
FQVNGRVLLDDLTEEFGIEFDDSEDIDTIGGWLQSRNTNLQKDDYVDTTYDRWVVSEIDN
EEECCEEEEEHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCC
HQIIWVILNYEFNEARPTIGQSDEDEKSE
CEEEEEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]