Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
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Accession | NC_009487 |
Length | 2,906,700 |
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The map label for this gene is nagA [H]
Identifier: 148267161
GI number: 148267161
Start: 792332
End: 793513
Strand: Direct
Name: nagA [H]
Synonym: SaurJH9_0725
Alternate gene names: 148267161
Gene position: 792332-793513 (Clockwise)
Preceding gene: 148267160
Following gene: 148267162
Centisome position: 27.26
GC content: 35.96
Gene sequence:
>1182_bases GTGTCAGAATTAATTATATATAACGGCAAAGTTTATACTGAAGATGGCAAAATCGATAATGGTTACATTCATGTGAAAGA TGGACAGATTGTTGCAATTGGAGAAGGGGATGATAAAGCAGCAATTGATAATGATACGACAAATAAAATTCAAGTGATTG ATGCTAAAGGTCATCATGTATTACCAGGTTTTATTGATATACATATTCATGGTGGTTATGGTCAAGATGCAATGGATGGG TCATACGATGGCTTAAAATATCTATCCGAAAATTTGTTATCTGAAGGGACGACATCATACTTGGCCACTACAATGACGCA ATCTACTGATAAAATAGATAAAGCACTTACAAATATTGCTAAATATGAAGCGGAGCAAGATGTTCACAATGCAGCGGAAA TTGTAGGTATACATTTAGAAGGACCATTTATATCTGAAAATAAAGTTGGTGCTCAACATCCGCAATACGTTGTACGCCCA TTTATCGATAAAATTAAACATTTTCAAGAGACTGCTAACAGATTAATAAAGATTATGACGTTTGCACCTGAAGTTGAAGG TGCAAAAGAAGCGCTTGAAACGTATAAAGATGACATTATTTTTTCAATTGGTCATACAGTGGCAACATACGAAGAAGCAG TCGAAGCTGTTGAGCGAGGAGCTAAACATGTCACGCATTTATATAATGCAGCGACGCCATTCCAACATAGAGAACCAGGT GTTTTTGGAGCAGCATGGTTGAATGATGCTCTACATACCGAAATGATTGTTGATGGCACACATTCTCATCCGGCATCGGT TGCAATTGCTTACCGTATGAAAGGTAATGAACGTTTTTATTTAATTACCGATGCAATGCGTGCAAAAGGTATGCCTGAAG GAGAATATGATTTGGGTGGACAAAAAGTAACTGTTCAATCGCAACAAGCACGTCTTGCAAATGGTGCGCTTGCTGGTAGT ATTTTAAAAATGAATCATGGGTTACGTAACTTAATATCATTTACAGGTGATACATTAGATCATTTATGGCGAGTAACAAG TTTAAATCAAGCCATTGCATTAGGTATCGATGATAGAAAAGGTAGTATTAAAGTAAATAAGGATGCAGATCTTGTTATTC TAGATGATGATATGAATGTAAAATCTACAATAAAACAAGGCAAGGTTCACACATTTAGCTAA
Upstream 100 bases:
>100_bases ACTTTTTTAATATTTTGCAAAAAGTTATGCCAAACGAAGCAGATATAGTAAAATATGAGTGTCTTAAAGTGAAAATTTAT AAATAAAGAAGGGTTTATAC
Downstream 100 bases:
>100_bases TAAATAATCATAATTAAATGTATGCAATAGATTTAATCTGTTAACATAAGCACTTTATATTATGATAAAATAGAAGCAAT AACATTTTTTTCTGGGGGTG
Product: N-acetylglucosamine-6-phosphate deacetylase
Products: NA
Alternate protein names: GlcNAc 6-P deacetylase [H]
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSELIIYNGKVYTEDGKIDNGYIHVKDGQIVAIGEGDDKAAIDNDTTNKIQVIDAKGHHVLPGFIDIHIHGGYGQDAMDG SYDGLKYLSENLLSEGTTSYLATTMTQSTDKIDKALTNIAKYEAEQDVHNAAEIVGIHLEGPFISENKVGAQHPQYVVRP FIDKIKHFQETANRLIKIMTFAPEVEGAKEALETYKDDIIFSIGHTVATYEEAVEAVERGAKHVTHLYNAATPFQHREPG VFGAAWLNDALHTEMIVDGTHSHPASVAIAYRMKGNERFYLITDAMRAKGMPEGEYDLGGQKVTVQSQQARLANGALAGS ILKMNHGLRNLISFTGDTLDHLWRVTSLNQAIALGIDDRKGSIKVNKDADLVILDDDMNVKSTIKQGKVHTFS
Sequences:
>Translated_393_residues MSELIIYNGKVYTEDGKIDNGYIHVKDGQIVAIGEGDDKAAIDNDTTNKIQVIDAKGHHVLPGFIDIHIHGGYGQDAMDG SYDGLKYLSENLLSEGTTSYLATTMTQSTDKIDKALTNIAKYEAEQDVHNAAEIVGIHLEGPFISENKVGAQHPQYVVRP FIDKIKHFQETANRLIKIMTFAPEVEGAKEALETYKDDIIFSIGHTVATYEEAVEAVERGAKHVTHLYNAATPFQHREPG VFGAAWLNDALHTEMIVDGTHSHPASVAIAYRMKGNERFYLITDAMRAKGMPEGEYDLGGQKVTVQSQQARLANGALAGS ILKMNHGLRNLISFTGDTLDHLWRVTSLNQAIALGIDDRKGSIKVNKDADLVILDDDMNVKSTIKQGKVHTFS >Mature_392_residues SELIIYNGKVYTEDGKIDNGYIHVKDGQIVAIGEGDDKAAIDNDTTNKIQVIDAKGHHVLPGFIDIHIHGGYGQDAMDGS YDGLKYLSENLLSEGTTSYLATTMTQSTDKIDKALTNIAKYEAEQDVHNAAEIVGIHLEGPFISENKVGAQHPQYVVRPF IDKIKHFQETANRLIKIMTFAPEVEGAKEALETYKDDIIFSIGHTVATYEEAVEAVERGAKHVTHLYNAATPFQHREPGV FGAAWLNDALHTEMIVDGTHSHPASVAIAYRMKGNERFYLITDAMRAKGMPEGEYDLGGQKVTVQSQQARLANGALAGSI LKMNHGLRNLISFTGDTLDHLWRVTSLNQAIALGIDDRKGSIKVNKDADLVILDDDMNVKSTIKQGKVHTFS
Specific function: N-acetylglucosamine utilization. [C]
COG id: COG1820
COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nagA family [H]
Homologues:
Organism=Homo sapiens, GI224922791, Length=429, Percent_Identity=31.2354312354312, Blast_Score=182, Evalue=3e-46, Organism=Homo sapiens, GI21361513, Length=429, Percent_Identity=31.002331002331, Blast_Score=181, Evalue=8e-46, Organism=Escherichia coli, GI1786892, Length=387, Percent_Identity=28.6821705426357, Blast_Score=155, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17553768, Length=405, Percent_Identity=32.5925925925926, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI19920392, Length=396, Percent_Identity=32.5757575757576, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI281361140, Length=410, Percent_Identity=31.7073170731707, Blast_Score=185, Evalue=6e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR003764 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.1.25 [H]
Molecular weight: Translated: 43187; Mature: 43056
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELIIYNGKVYTEDGKIDNGYIHVKDGQIVAIGEGDDKAAIDNDTTNKIQVIDAKGHHV CCCEEEECCEEEECCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEE LPGFIDIHIHGGYGQDAMDGSYDGLKYLSENLLSEGTTSYLATTMTQSTDKIDKALTNIA CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHH KYEAEQDVHNAAEIVGIHLEGPFISENKVGAQHPQYVVRPFIDKIKHFQETANRLIKIMT HHHHHHHHHCCEEEEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEE FAPEVEGAKEALETYKDDIIFSIGHTVATYEEAVEAVERGAKHVTHLYNAATPFQHREPG ECCCCCHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VFGAAWLNDALHTEMIVDGTHSHPASVAIAYRMKGNERFYLITDAMRAKGMPEGEYDLGG CEEHHHHHHHHHHEEEEECCCCCCCEEEEEEEECCCCEEEEEEHHHHHCCCCCCCCCCCC QKVTVQSQQARLANGALAGSILKMNHGLRNLISFTGDTLDHLWRVTSLNQAIALGIDDRK CEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCC GSIKVNKDADLVILDDDMNVKSTIKQGKVHTFS CCEEECCCCCEEEECCCCCHHHHHHCCCEECCC >Mature Secondary Structure SELIIYNGKVYTEDGKIDNGYIHVKDGQIVAIGEGDDKAAIDNDTTNKIQVIDAKGHHV CCEEEECCEEEECCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCCCEEEEEECCCCEE LPGFIDIHIHGGYGQDAMDGSYDGLKYLSENLLSEGTTSYLATTMTQSTDKIDKALTNIA CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHH KYEAEQDVHNAAEIVGIHLEGPFISENKVGAQHPQYVVRPFIDKIKHFQETANRLIKIMT HHHHHHHHHCCEEEEEEEECCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEE FAPEVEGAKEALETYKDDIIFSIGHTVATYEEAVEAVERGAKHVTHLYNAATPFQHREPG ECCCCCHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC VFGAAWLNDALHTEMIVDGTHSHPASVAIAYRMKGNERFYLITDAMRAKGMPEGEYDLGG CEEHHHHHHHHHHEEEEECCCCCCCEEEEEEEECCCCEEEEEEHHHHHCCCCCCCCCCCC QKVTVQSQQARLANGALAGSILKMNHGLRNLISFTGDTLDHLWRVTSLNQAIALGIDDRK CEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCC GSIKVNKDADLVILDDDMNVKSTIKQGKVHTFS CCEEECCCCCEEEECCCCCHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]