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The map label for this gene is yhfR [C]

Identifier: 148266561

GI number: 148266561

Start: 143778

End: 144533

Strand: Reverse

Name: yhfR [C]

Synonym: SaurJH9_0121

Alternate gene names: 148266561

Gene position: 144533-143778 (Counterclockwise)

Preceding gene: 148266566

Following gene: 148266542

Centisome position: 4.97

GC content: 35.85

Gene sequence:

>756_bases
ATGGAGGTTGTCTACGTGACGCAAACACAACCAAAATTTTTAACGATTTATAATACGTTATATAAAGAAATTCAAATAGG
AAAATATCCGAGTGGCCATGCATTACCTACTGAAAAGGAACTTTGTGCGCGCTTTGATGTCAGTCGTATGACTTTGCGCC
AAGCTATAAAATTGTTAGCCGAAGATGGCATCGTAGAGAGTACAAGAGGGAAGGGACACTTTGTTATTCCACAAACAAAT
GCCCAACACGCTTCAAGTATGGATCAATTTAAGCATCCACTTGATCAAATATTGCTAGCTCGCGTATCTATGTCATCAAT
TAATTATCGTGTTGATTTAGAAAGTGAATATACAAATCATTTGTTTGCAAACCATCCTTCTGCCGTCATTGCAATGGAAC
GCTATTATCAAAAAAAGGACAATCATTCTAAGCAAGCTGATGCATTTTGCTTTACCTTTATACCGTTAAATGTCATTGAC
ACATTTAAAGTGAATACACAAAACGAAGACGACATGAAGACATTCGTTGAGCAAACGATTTATAGCAATGCATATCAATC
AGATTTAAAAATGTCTATTACCAAAGCGCCCCGCTTCAAAAATCATAGTCACGTGTTTGATGGTGATACACATTGTTGGC
TGATTATTGAAACACTGTACGCACAAACACCTTATCCAATTATGATTAATAAGTGGTATATTCCACAGGAAATATCTGAA
TTAACACTGACACGTATAAGACAATCGGATTATTAA

Upstream 100 bases:

>100_bases
TTGTATAAAACTAATTTTCAAAGCCTATCTATATTTAATTTTTATAATTTTTCCAATTCGAGTAAAAATTATTGTATGAT
GAGAGTGATTAAGTAACTTT

Downstream 100 bases:

>100_bases
AATTATTAAAATATAAGAAATTTTTTGATGACTATTTAGGGAGTTGGTAAGAAATGGAAAAGCTTGTTACAAGCGCAATT
TCATTCAGTCAACTACTGCC

Product: regulatory protein GntR, HTH

Products: NA

Alternate protein names: Transcriptional Regulatory Protein; GntR Family Transcriptional Regulator; Transcriptional Regulator GntR Family; Transcription Regulator; Histidine Utilization Repressor; GntR Family Regulatory Protein; Transcriptional Regulator GntR Family Protein; Regulatory Protein GntR HTH

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MEVVYVTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCARFDVSRMTLRQAIKLLAEDGIVESTRGKGHFVIPQTN
AQHASSMDQFKHPLDQILLARVSMSSINYRVDLESEYTNHLFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVID
TFKVNTQNEDDMKTFVEQTIYSNAYQSDLKMSITKAPRFKNHSHVFDGDTHCWLIIETLYAQTPYPIMINKWYIPQEISE
LTLTRIRQSDY

Sequences:

>Translated_251_residues
MEVVYVTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCARFDVSRMTLRQAIKLLAEDGIVESTRGKGHFVIPQTN
AQHASSMDQFKHPLDQILLARVSMSSINYRVDLESEYTNHLFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVID
TFKVNTQNEDDMKTFVEQTIYSNAYQSDLKMSITKAPRFKNHSHVFDGDTHCWLIIETLYAQTPYPIMINKWYIPQEISE
LTLTRIRQSDY
>Mature_251_residues
MEVVYVTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCARFDVSRMTLRQAIKLLAEDGIVESTRGKGHFVIPQTN
AQHASSMDQFKHPLDQILLARVSMSSINYRVDLESEYTNHLFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVID
TFKVNTQNEDDMKTFVEQTIYSNAYQSDLKMSITKAPRFKNHSHVFDGDTHCWLIIETLYAQTPYPIMINKWYIPQEISE
LTLTRIRQSDY

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29191; Mature: 29191

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVVYVTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCARFDVSRMTLRQAIKLLA
CEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
EDGIVESTRGKGHFVIPQTNAQHASSMDQFKHPLDQILLARVSMSSINYRVDLESEYTNH
HCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHH
LFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVIDTFKVNTQNEDDMKTFVEQTI
HHCCCCHHHHHHHHHHHHCCCCCCHHCEEEEEEEEECEEEEEEECCCCHHHHHHHHHHHH
YSNAYQSDLKMSITKAPRFKNHSHVFDGDTHCWLIIETLYAQTPYPIMINKWYIPQEISE
HHHHHHHHHEEEEECCCCCCCCCEEECCCCEEEEEEEHHHCCCCCCEEEEEEECCHHHHH
LTLTRIRQSDY
HHHHHHHHCCC
>Mature Secondary Structure
MEVVYVTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCARFDVSRMTLRQAIKLLA
CEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHH
EDGIVESTRGKGHFVIPQTNAQHASSMDQFKHPLDQILLARVSMSSINYRVDLESEYTNH
HCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHH
LFANHPSAVIAMERYYQKKDNHSKQADAFCFTFIPLNVIDTFKVNTQNEDDMKTFVEQTI
HHCCCCHHHHHHHHHHHHCCCCCCHHCEEEEEEEEECEEEEEEECCCCHHHHHHHHHHHH
YSNAYQSDLKMSITKAPRFKNHSHVFDGDTHCWLIIETLYAQTPYPIMINKWYIPQEISE
HHHHHHHHHEEEEECCCCCCCCCEEECCCCEEEEEEEHHHCCCCCCEEEEEEECCHHHHH
LTLTRIRQSDY
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA