Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
---|---|
Accession | NC_009467 |
Length | 203,589 |
Click here to switch to the map view.
The map label for this gene is 148243776
Identifier: 148243776
GI number: 148243776
Start: 171369
End: 172604
Strand: Direct
Name: 148243776
Synonym: Acry_3259
Alternate gene names: NA
Gene position: 171369-172604 (Clockwise)
Preceding gene: 148243775
Following gene: 148243777
Centisome position: 84.17
GC content: 64.56
Gene sequence:
>1236_bases GTGACAAACGCCTCGGCTCATATCCGCGGCATCGCGGCCAATCGCTGCCAGTTTACCCTACAGGCGCTACAGGTCTTCTT CGTCGGTCTTGTCATCGGCATGGAGCGCGCGGTCCTGCCGACCCTCGCGCACGAGTTCGGCGTCGCTCCAGGTGCCTTTC TCTTTCTCGCGAGTTTCGTGCTCTCCTTCGGCCTGGTGAAGGGCGCGCTCAACCTTGTCGCCGGCGGGCTCGCCGACCGG TTCGGCCGCAAGCCTGTCCTCATTGCCGGCTGGATCGCAGCCATTCCCATCCCGCTACTGATCTGGGCGGCACCCAACTG GTGGTGGATCGTGATCGCGAACGTGTTTCTCGGGATCAGCCAGGGCTTCACCTGGACAATGACGGTGACCAGCCAGATTG ACCTCGCCGGCAGTCACCAGCGCGGGCTTGCCGTCGGCATCAACGAGGCTACTGGATATGTGGCCGTCGGCATCGCCGGT GCTTGTGCTGCCTTGCTGGCCGAGGCGGTCGGCGCGCGCGATGCCCTGATGATTTTCGGCATGGCCACGATTGGTCTGGC CTTCGCCACGATCACCCGTGTGCGCGACACGCTTGCCTGGGTAAAGGCCGAACATGCCGAGGCCGATGCTGGCGCATCGC AGGATCATACGCTCACGCTCCGCGCGATCTTCGTCCGGATCTCCTTTCGCGATCGGGTTGGGCGGGCGATCTGCCAGGGC GGGGTCGTCAACAAGATCGCCGACACGCTGGTCTGGGTGATGTTCCCGCTGTGCTTCAAGGCACATGGCGCCAAGCTGAT CGAAATCGGCTGGCTGACCGGCACCTACGCCACGGTCTGGGGCGTCTCACAGCTCTGGACTGGCCACTTGGGTGACCGGG TCGGCAGGCGGACGCCGGTGATCGCCGGGTTTTTCCTCCTTGCCGCCGGCATCGCAATCACGGCGGCCGGGCGCGATGTT TCGCTCTGGTTGCCGGGAGCGATCGTCATGGGCATCGGAATGGCGCTGCTCTACCCGAACTTGATCGCAGCAATGTCCGA CCAAGCGGCGCCACTGATCCGCGGCAAGGCTCTCGGGACCTACCGTTACTGGCGCGACACCGGCTACGCACTCAGCGCCC TGTTACTCGGGCTTATCGCCCAATTCGCCCAGGCAACCCTCCCGACGCTCTGGATTACGGCGATCCTCGTGGCCGCATCC GGCGGCTGGCTCATGCGGGATCTCTCTCGGAAATAA
Upstream 100 bases:
>100_bases GGGAGCAATTTGTCGCATTCATGCTCGAGAATATTCCACCCCCGCCCGAAGGCGCGGCCGAACTGCGTGCGTGGAATTCG GGCTTCACCGCGTGACCACA
Downstream 100 bases:
>100_bases AGCCACACGGCAAAGCCCAACATATCAGTTCTGTGTGTATTCACGTGTGCCGCACGTAAAATGCACTTCCGTGCCACCAC CCCTACCTCTATTCAGAGGT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Transporter; Facilitator Family Transporter; Facilitator Superfamily Protein; Tetracyclin Resistance Protein; Transporter Facilitator Family; MFS Transporter Permease; Multidrug Drug Efflux Protein; Formamidopyrimidine-DNA Glycosylase
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MTNASAHIRGIAANRCQFTLQALQVFFVGLVIGMERAVLPTLAHEFGVAPGAFLFLASFVLSFGLVKGALNLVAGGLADR FGRKPVLIAGWIAAIPIPLLIWAAPNWWWIVIANVFLGISQGFTWTMTVTSQIDLAGSHQRGLAVGINEATGYVAVGIAG ACAALLAEAVGARDALMIFGMATIGLAFATITRVRDTLAWVKAEHAEADAGASQDHTLTLRAIFVRISFRDRVGRAICQG GVVNKIADTLVWVMFPLCFKAHGAKLIEIGWLTGTYATVWGVSQLWTGHLGDRVGRRTPVIAGFFLLAAGIAITAAGRDV SLWLPGAIVMGIGMALLYPNLIAAMSDQAAPLIRGKALGTYRYWRDTGYALSALLLGLIAQFAQATLPTLWITAILVAAS GGWLMRDLSRK
Sequences:
>Translated_411_residues MTNASAHIRGIAANRCQFTLQALQVFFVGLVIGMERAVLPTLAHEFGVAPGAFLFLASFVLSFGLVKGALNLVAGGLADR FGRKPVLIAGWIAAIPIPLLIWAAPNWWWIVIANVFLGISQGFTWTMTVTSQIDLAGSHQRGLAVGINEATGYVAVGIAG ACAALLAEAVGARDALMIFGMATIGLAFATITRVRDTLAWVKAEHAEADAGASQDHTLTLRAIFVRISFRDRVGRAICQG GVVNKIADTLVWVMFPLCFKAHGAKLIEIGWLTGTYATVWGVSQLWTGHLGDRVGRRTPVIAGFFLLAAGIAITAAGRDV SLWLPGAIVMGIGMALLYPNLIAAMSDQAAPLIRGKALGTYRYWRDTGYALSALLLGLIAQFAQATLPTLWITAILVAAS GGWLMRDLSRK >Mature_410_residues TNASAHIRGIAANRCQFTLQALQVFFVGLVIGMERAVLPTLAHEFGVAPGAFLFLASFVLSFGLVKGALNLVAGGLADRF GRKPVLIAGWIAAIPIPLLIWAAPNWWWIVIANVFLGISQGFTWTMTVTSQIDLAGSHQRGLAVGINEATGYVAVGIAGA CAALLAEAVGARDALMIFGMATIGLAFATITRVRDTLAWVKAEHAEADAGASQDHTLTLRAIFVRISFRDRVGRAICQGG VVNKIADTLVWVMFPLCFKAHGAKLIEIGWLTGTYATVWGVSQLWTGHLGDRVGRRTPVIAGFFLLAAGIAITAAGRDVS LWLPGAIVMGIGMALLYPNLIAAMSDQAAPLIRGKALGTYRYWRDTGYALSALLLGLIAQFAQATLPTLWITAILVAASG GWLMRDLSRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43695; Mature: 43564
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNASAHIRGIAANRCQFTLQALQVFFVGLVIGMERAVLPTLAHEFGVAPGAFLFLASFV CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LSFGLVKGALNLVAGGLADRFGRKPVLIAGWIAAIPIPLLIWAAPNWWWIVIANVFLGIS HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCHHHEEEECCCCHHHHHHHHHHHHC QGFTWTMTVTSQIDLAGSHQRGLAVGINEATGYVAVGIAGACAALLAEAVGARDALMIFG CCCEEEEEEEEEEECCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHH MATIGLAFATITRVRDTLAWVKAEHAEADAGASQDHTLTLRAIFVRISFRDRVGRAICQG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHCC GVVNKIADTLVWVMFPLCFKAHGAKLIEIGWLTGTYATVWGVSQLWTGHLGDRVGRRTPV CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHH IAGFFLLAAGIAITAAGRDVSLWLPGAIVMGIGMALLYPNLIAAMSDQAAPLIRGKALGT HHHHHHHHHHHHEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC YRYWRDTGYALSALLLGLIAQFAQATLPTLWITAILVAASGGWLMRDLSRK HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure TNASAHIRGIAANRCQFTLQALQVFFVGLVIGMERAVLPTLAHEFGVAPGAFLFLASFV CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LSFGLVKGALNLVAGGLADRFGRKPVLIAGWIAAIPIPLLIWAAPNWWWIVIANVFLGIS HHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCHHHEEEECCCCHHHHHHHHHHHHC QGFTWTMTVTSQIDLAGSHQRGLAVGINEATGYVAVGIAGACAALLAEAVGARDALMIFG CCCEEEEEEEEEEECCCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCHHHHHHH MATIGLAFATITRVRDTLAWVKAEHAEADAGASQDHTLTLRAIFVRISFRDRVGRAICQG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHCC GVVNKIADTLVWVMFPLCFKAHGAKLIEIGWLTGTYATVWGVSQLWTGHLGDRVGRRTPV CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHH IAGFFLLAAGIAITAAGRDVSLWLPGAIVMGIGMALLYPNLIAAMSDQAAPLIRGKALGT HHHHHHHHHHHHEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCC YRYWRDTGYALSALLLGLIAQFAQATLPTLWITAILVAASGGWLMRDLSRK HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA