Definition | Acidiphilium cryptum JF-5 plasmid pACRY01, complete sequence. |
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Accession | NC_009467 |
Length | 203,589 |
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The map label for this gene is 148243639
Identifier: 148243639
GI number: 148243639
Start: 4361
End: 5737
Strand: Direct
Name: 148243639
Synonym: Acry_3108
Alternate gene names: NA
Gene position: 4361-5737 (Clockwise)
Preceding gene: 148243638
Following gene: 148243640
Centisome position: 2.14
GC content: 65.65
Gene sequence:
>1377_bases ATGAAGAAAACGTCCCGACACCTCCGTTTCAGACCCAGCCGCGTCGGTGCTCTTGCGCTTGCGACACTGCTTGCCGGCTG TGCGCGGTATCAGCCGGCGCCGTTGCATCCCGGTACTTCGGCCACGGCACTGCTCGGCCGCCGTCTCGACGAGCCGGCGC TTGGCCAATTCCTCGCGGCTATGGGCGTGCATCCGCGCGGACACTGGGGATTGCGGGCTCTGACGCTCGTCGCCGTCTAT GAGCGGCCAGATCTGCGGATCAGCGTCGCCGCCTATAACGCCGCGAAGGCGGCGGTGACGACGGCCCAGCAGATCCCGAA CCCCACGCTTTCCCTCGCGCCCAGCTTCAACGCGACGCAAGCCTTCCCTTCGCCAATCAAGATCGGGCCGGTCATCAGTT TTCTCGTCTCCAATCTCGGTGCTCGCGAGGCTGGCATCGCCGCCGCGCGGGATCGCCAGCAAGCCGCGCGAATACTCATC GCTGCCGCGGCATGGCGGGAACGCAGCAACGTCCGCAACGCGCTGCTCACACTCTGGCTCGATGAACGGATCGCCAGGAT CAAGGCGCGCGTCGCCAGCTATGCCGCGACAGCGTCCCGCCTCGTAGCACAGCGCGTGACCTCTGGGATGCTTGCTGATA CCGTGCTCGCCAGCACAACCGAGGCGGCGAACAAGGCAAGCTTTGGCGCCGCTGAAGCGCGGGTCCAGATCGGAATGGAC CGGGCCCACTTGGCCGCTGCGATCGGAATGCCGGCGGCGGCGCTTCGAGGTAAGCACCTTTCATTCACCGCCTTTGAGCA TCCGTTGCCGCCGGCCAATCTCGCCGCTCTTACACGCACGGCGCTGGTAACCAGTCCATCAGTCGTCGGGGCCTACAAGA ATTATCGCGCGGCCGACGCTTCTCTCCGCAAAGCGATCGACCAGCAGTTTCCAGGCTTTCGTATTGGCTCCGGGTATCAC TACGATCAGGGCGCTAGCAAGTTCATACTTGCCCTCTCGCTGCCGCTGCCAATTCTCAACCAGAATCAGGGCCCGATCGC CGAGGCGCGTGCAAGGCGCCAGCTTGCGGCGGCCCTGTTCGATCGGGCGCAGGTGCGCGTTCTCCACGAGATCGACGCAG CCAAGGCCGCTCTGCAAGGCAGCGTGAGCGTTGCGCGCGCGGCACGGCTACTCCTCGCAACCGCCCGCGAGCGCGAACGC CAGGCTATTGAAGCTTACCGCGCCGGTGCGACCGGCCAGCTGCGCATGGTCGAGGCCGAACAGCAGGCAACCCTGGTCCG CGAACAGGAGCTGACCACGGATGCTCAGCGATTACGCGCCCTCGCAGCCCTGGCCGACGCGCTCCATCACCCCATTTTCC GGGAGAGCCACTCATGA
Upstream 100 bases:
>100_bases ATCCCGAAACGGTGAGCCCAAACTGACGAAATCGTCATTCTGGCGAGGCGGAAACGTCATTCTCGCCGGCTAAAGCGCGA ACTCTTTTCCGCTTGAAGCC
Downstream 100 bases:
>100_bases AGCAGCATCTGCAGGCCATCGCGGCAAGCCTATCACTTGTTTGCGCCGCAGCTGTCGCGCATGCCGCGGCCCTGCGCAGC GTGACGATCAATGCGGCCAC
Product: outer membrane efflux protein
Products: NA
Alternate protein names: RND-Type Multidrug Efflux Pump Outer Membrane Protein; Divalent Cation Resistant Determinant Protein C
Number of amino acids: Translated: 458; Mature: 458
Protein sequence:
>458_residues MKKTSRHLRFRPSRVGALALATLLAGCARYQPAPLHPGTSATALLGRRLDEPALGQFLAAMGVHPRGHWGLRALTLVAVY ERPDLRISVAAYNAAKAAVTTAQQIPNPTLSLAPSFNATQAFPSPIKIGPVISFLVSNLGAREAGIAAARDRQQAARILI AAAAWRERSNVRNALLTLWLDERIARIKARVASYAATASRLVAQRVTSGMLADTVLASTTEAANKASFGAAEARVQIGMD RAHLAAAIGMPAAALRGKHLSFTAFEHPLPPANLAALTRTALVTSPSVVGAYKNYRAADASLRKAIDQQFPGFRIGSGYH YDQGASKFILALSLPLPILNQNQGPIAEARARRQLAAALFDRAQVRVLHEIDAAKAALQGSVSVARAARLLLATARERER QAIEAYRAGATGQLRMVEAEQQATLVREQELTTDAQRLRALAALADALHHPIFRESHS
Sequences:
>Translated_458_residues MKKTSRHLRFRPSRVGALALATLLAGCARYQPAPLHPGTSATALLGRRLDEPALGQFLAAMGVHPRGHWGLRALTLVAVY ERPDLRISVAAYNAAKAAVTTAQQIPNPTLSLAPSFNATQAFPSPIKIGPVISFLVSNLGAREAGIAAARDRQQAARILI AAAAWRERSNVRNALLTLWLDERIARIKARVASYAATASRLVAQRVTSGMLADTVLASTTEAANKASFGAAEARVQIGMD RAHLAAAIGMPAAALRGKHLSFTAFEHPLPPANLAALTRTALVTSPSVVGAYKNYRAADASLRKAIDQQFPGFRIGSGYH YDQGASKFILALSLPLPILNQNQGPIAEARARRQLAAALFDRAQVRVLHEIDAAKAALQGSVSVARAARLLLATARERER QAIEAYRAGATGQLRMVEAEQQATLVREQELTTDAQRLRALAALADALHHPIFRESHS >Mature_458_residues MKKTSRHLRFRPSRVGALALATLLAGCARYQPAPLHPGTSATALLGRRLDEPALGQFLAAMGVHPRGHWGLRALTLVAVY ERPDLRISVAAYNAAKAAVTTAQQIPNPTLSLAPSFNATQAFPSPIKIGPVISFLVSNLGAREAGIAAARDRQQAARILI AAAAWRERSNVRNALLTLWLDERIARIKARVASYAATASRLVAQRVTSGMLADTVLASTTEAANKASFGAAEARVQIGMD RAHLAAAIGMPAAALRGKHLSFTAFEHPLPPANLAALTRTALVTSPSVVGAYKNYRAADASLRKAIDQQFPGFRIGSGYH YDQGASKFILALSLPLPILNQNQGPIAEARARRQLAAALFDRAQVRVLHEIDAAKAALQGSVSVARAARLLLATARERER QAIEAYRAGATGQLRMVEAEQQATLVREQELTTDAQRLRALAALADALHHPIFRESHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49011; Mature: 49011
Theoretical pI: Translated: 11.64; Mature: 11.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTSRHLRFRPSRVGALALATLLAGCARYQPAPLHPGTSATALLGRRLDEPALGQFLAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH MGVHPRGHWGLRALTLVAVYERPDLRISVAAYNAAKAAVTTAQQIPNPTLSLAPSFNATQ HCCCCCCCCHHHHHHHHHEECCCCCEEEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCC AFPSPIKIGPVISFLVSNLGAREAGIAAARDRQQAARILIAAAAWRERSNVRNALLTLWL CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DERIARIKARVASYAATASRLVAQRVTSGMLADTVLASTTEAANKASFGAAEARVQIGMD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCC RAHLAAAIGMPAAALRGKHLSFTAFEHPLPPANLAALTRTALVTSPSVVGAYKNYRAADA HHHHHHHHCCCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCHHHHH SLRKAIDQQFPGFRIGSGYHYDQGASKFILALSLPLPILNQNQGPIAEARARRQLAAALF HHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH DRAQVRVLHEIDAAKAALQGSVSVARAARLLLATARERERQAIEAYRAGATGQLRMVEAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHH QQATLVREQELTTDAQRLRALAALADALHHPIFRESHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC >Mature Secondary Structure MKKTSRHLRFRPSRVGALALATLLAGCARYQPAPLHPGTSATALLGRRLDEPALGQFLAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH MGVHPRGHWGLRALTLVAVYERPDLRISVAAYNAAKAAVTTAQQIPNPTLSLAPSFNATQ HCCCCCCCCHHHHHHHHHEECCCCCEEEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCC AFPSPIKIGPVISFLVSNLGAREAGIAAARDRQQAARILIAAAAWRERSNVRNALLTLWL CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DERIARIKARVASYAATASRLVAQRVTSGMLADTVLASTTEAANKASFGAAEARVQIGMD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCC RAHLAAAIGMPAAALRGKHLSFTAFEHPLPPANLAALTRTALVTSPSVVGAYKNYRAADA HHHHHHHHCCCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCHHHHH SLRKAIDQQFPGFRIGSGYHYDQGASKFILALSLPLPILNQNQGPIAEARARRQLAAALF HHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH DRAQVRVLHEIDAAKAALQGSVSVARAARLLLATARERERQAIEAYRAGATGQLRMVEAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHH QQATLVREQELTTDAQRLRALAALADALHHPIFRESHS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA