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The map label for this gene is yhcC [H]

Identifier: 147675264

GI number: 147675264

Start: 2082828

End: 2083778

Strand: Reverse

Name: yhcC [H]

Synonym: VC0395_A1950

Alternate gene names: 147675264

Gene position: 2083778-2082828 (Counterclockwise)

Preceding gene: 147674811

Following gene: 147673373

Centisome position: 68.91

GC content: 50.05

Gene sequence:

>951_bases
TTGAGCGAGCCGATGCATTTACATCAACTGGTGAACACCATAGGTCAAGATTTACAACGCCGTTATGGAGAGAAGGTCCA
TAAGTTAACGCTGCATGGTGGATTCAGTTGTCCGAATCGCGATGGCACGATAGGCCGTGGCGGCTGCACTTTCTGTAATG
TGGCGTCGTTTGCCGATGAAAATACTCAGCAGCAGAGTATTCAAGCGCAGTTGAAAGATCGGGCGGGGGAGATCAAACGC
GCCAAAAAATACCTCGCTTATTTTCAAGCTTACACCAGCACGTATGCGGAAGTGCAAGTGCTGAAATCCATGTACGAACA
AGCCCTAGAAGAAGCGGATATTGTGGGGTTGTGTGTTGGCACTCGTCCTGATTGTGTACCGGATGCGGTGCTTAAGTTGC
TCGCCGATTATGTGCAGCAAGGTTATGAAATTTGGCTTGAATTGGGTTTACAGACGGCGCACGACCAGACTTTAAAACGC
ATTAACCGCGGGCACGATTTTGCCTGCTACGCAGAGATCACTGCCAAAGCTAGAGCGTTAGGTATCAAAGTGTGTACTCA
CTTGATTGTTGGGTTACCCGGTGAAGAGCGCACTGAAAACCTCACCACGTTACAGCAAGTACTGAAGGTAGGCACCGATG
GCATTAAGTTGCACGGTTTACACATCGTAGAAGGCAGCACTATGGCCAAAGCGTGGCGAGCGGGGCGTTTAACGGTACTC
GATCAGGATCAATATGTGTCCATCGCTTGCGAGATGATCCGTTCTACACCCCCTGAGATTGTTTATCATCGCGTCTCTTC
TGCAGCCCGCAGGCCAACGCTACTTGCCCCGTTGTGGTGCGAAAATCGCTGGTGGGCGATGACAGCGATTGGCCAAAGAT
TGGAAAAAGAAGGGGCTCAGGGCTCGTTGCTCGGTACGCCTTTTGAGTATTCACCTTTGAACTTAAAGTAA

Upstream 100 bases:

>100_bases
GCTGTTTGAAATCAAACGCGAGGGATTAAAATTTGTGACCAATTCGATTGGAAATGTAATTAAATTACACGGATGGTAGT
GAGAGATATTTGTATTTAGA

Downstream 100 bases:

>100_bases
TAATCCGCAGCAAAGTCAGATAATCTTTTGTACTATTTAAAGAATCATCAATAACACCGCTGAATGCATGCCTGAATTTC
TCTCTGAATTTGTACGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSEPMHLHQLVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADENTQQQSIQAQLKDRAGEIKR
AKKYLAYFQAYTSTYAEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLELGLQTAHDQTLKR
INRGHDFACYAEITAKARALGIKVCTHLIVGLPGEERTENLTTLQQVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVL
DQDQYVSIACEMIRSTPPEIVYHRVSSAARRPTLLAPLWCENRWWAMTAIGQRLEKEGAQGSLLGTPFEYSPLNLK

Sequences:

>Translated_316_residues
MSEPMHLHQLVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADENTQQQSIQAQLKDRAGEIKR
AKKYLAYFQAYTSTYAEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLELGLQTAHDQTLKR
INRGHDFACYAEITAKARALGIKVCTHLIVGLPGEERTENLTTLQQVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVL
DQDQYVSIACEMIRSTPPEIVYHRVSSAARRPTLLAPLWCENRWWAMTAIGQRLEKEGAQGSLLGTPFEYSPLNLK
>Mature_315_residues
SEPMHLHQLVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADENTQQQSIQAQLKDRAGEIKRA
KKYLAYFQAYTSTYAEVQVLKSMYEQALEEADIVGLCVGTRPDCVPDAVLKLLADYVQQGYEIWLELGLQTAHDQTLKRI
NRGHDFACYAEITAKARALGIKVCTHLIVGLPGEERTENLTTLQQVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVLD
QDQYVSIACEMIRSTPPEIVYHRVSSAARRPTLLAPLWCENRWWAMTAIGQRLEKEGAQGSLLGTPFEYSPLNLK

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0486 [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=304, Percent_Identity=69.4078947368421, Blast_Score=449, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 35260; Mature: 35129

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPMHLHQLVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADE
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCC
NTQQQSIQAQLKDRAGEIKRAKKYLAYFQAYTSTYAEVQVLKSMYEQALEEADIVGLCVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
TRPDCVPDAVLKLLADYVQQGYEIWLELGLQTAHDQTLKRINRGHDFACYAEITAKARAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHH
GIKVCTHLIVGLPGEERTENLTTLQQVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHCCCEEEE
DQDQYVSIACEMIRSTPPEIVYHRVSSAARRPTLLAPLWCENRWWAMTAIGQRLEKEGAQ
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCC
GSLLGTPFEYSPLNLK
CCEECCCCCCCCCCCC
>Mature Secondary Structure 
SEPMHLHQLVNTIGQDLQRRYGEKVHKLTLHGGFSCPNRDGTIGRGGCTFCNVASFADE
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCC
NTQQQSIQAQLKDRAGEIKRAKKYLAYFQAYTSTYAEVQVLKSMYEQALEEADIVGLCVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
TRPDCVPDAVLKLLADYVQQGYEIWLELGLQTAHDQTLKRINRGHDFACYAEITAKARAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHH
GIKVCTHLIVGLPGEERTENLTTLQQVLKVGTDGIKLHGLHIVEGSTMAKAWRAGRLTVL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHCCCEEEE
DQDQYVSIACEMIRSTPPEIVYHRVSSAARRPTLLAPLWCENRWWAMTAIGQRLEKEGAQ
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHCCCC
GSLLGTPFEYSPLNLK
CCEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]