Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
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Accession | NC_009457 |
Length | 3,024,069 |
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The map label for this gene is 147675204
Identifier: 147675204
GI number: 147675204
Start: 2106202
End: 2106348
Strand: Reverse
Name: 147675204
Synonym: VC0395_A1965
Alternate gene names: NA
Gene position: 2106348-2106202 (Counterclockwise)
Preceding gene: 147673654
Following gene: 147673176
Centisome position: 69.65
GC content: 43.54
Gene sequence:
>147_bases ATGCCCGCAGCTGCAAAGCTGTTTATCTCATTTCTTTATGAGCTTAAGATCAAAGTTGCCGTTGCGAGTGTTTACACTGT TTTTATCGGCAACATCATGTTTGGCGTAACTAAGATGCTGCTCTATCTCGGCCCAAGTGCATGTTAG
Upstream 100 bases:
>100_bases TGGTTTTAAGATCTGCTGCAAGGGCTTACATTGTTTCCAACTTACAAAGCAGAGGCTATTGGATTTTTGGTGCACTACAC TATCGAGTATATTGGTGCTA
Downstream 100 bases:
>100_bases GCGAGTGTTTTTGTTAGCTGCTTATACTATATATTGTTCACCAAGCAGGTATTTTAGGTATTTGTAGTCCGCTACTAACT GAACGATAAGCTGGTCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 47
Protein sequence:
>48_residues MPAAAKLFISFLYELKIKVAVASVYTVFIGNIMFGVTKMLLYLGPSAC
Sequences:
>Translated_48_residues MPAAAKLFISFLYELKIKVAVASVYTVFIGNIMFGVTKMLLYLGPSAC >Mature_47_residues PAAAKLFISFLYELKIKVAVASVYTVFIGNIMFGVTKMLLYLGPSAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5232; Mature: 5100
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAAKLFISFLYELKIKVAVASVYTVFIGNIMFGVTKMLLYLGPSAC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PAAAKLFISFLYELKIKVAVASVYTVFIGNIMFGVTKMLLYLGPSAC CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA