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The map label for this gene is yfcA [H]

Identifier: 147673176

GI number: 147673176

Start: 2101627

End: 2102412

Strand: Reverse

Name: yfcA [H]

Synonym: VC0395_A1961

Alternate gene names: 147673176

Gene position: 2102412-2101627 (Counterclockwise)

Preceding gene: 147675204

Following gene: 147674811

Centisome position: 69.52

GC content: 51.65

Gene sequence:

>786_bases
ATGGAACTTTCACTGGAAGTATTGGGGCTGCTGTTTTTAGTGGCGGGAGTTGCGGGATTCATTGATGCCATGGCGGGCGG
TGGCGGTTTGCTGACTTTACCAGCCTTGCTGGCCGCAGGGGTTCCTCCGACTCAAGCTCTGGCGACCAACAAACTGCAAA
GCTCCTTTGGTAGCTTTTCGGCCACGCTCTATTTTGTGCGCAAGGGCGTTGTGAGCCTAAAAGCGATGCGATTGGCGATT
GCTTGTACTTTTGTCGGCGCGGCGCTTGGCGCAGAAGCGGTGCAATATATTGATGCCACTTTGCTGACCAGCCTTATCCC
CCTGTTACTGCTCGGAATTTCGCTCTATTTCTTATTGGCACCGACCACCAAAACGCACACAGGGCCTGCGCCTTTATCCG
AAACCGCGTTTGCCTTCACGGTAGGTTTTGGTATCGGTTTTTATGATGGCTTTTTTGGCCCCGGTACAGGCTCAATTTTT
ACCGTCTGCTTTGTGGCTTTGGGGCATTTTAGTTTAGTTGAAGCCACCGCTCGCACCAAGGTACTCAATTTTACGTCCAA
CATTGCCGCGTTGACCTTCTTCTTAATCGCTGGTTTGCCGATTTGGGAAATTGGCTTAACCATGGCGGTAGGTGGATTTA
TCGGCGCTCGTATGGGCGCAAAAGTGGTGATTAGCAAAGGGCAGCGTTGGATCCGCCCGTTGGTGATCACCATGTCTATG
CTGATGGCGCTAAAACTGCTTTGGGAACAGCATCATGCAGCGCTGTTATCAATGCTTGGACTCTAG

Upstream 100 bases:

>100_bases
TCGATGAATAAATGGAATAGATTGTCGTCTTGCGTTTCGCTGTTTTGATGTTTTGAGCAGTGATACTGTTGGGCTTTGTC
ATTCAAGATGTTGATTAGAA

Downstream 100 bases:

>100_bases
AGCTGCGATACCGGCTGGCCCGCAGACAAATATGAATCGGCCGAGTAAGGTCTGCTAATTCAGCAAAATCAAAGCAGTGT
TGGGGCTCTATTTTTAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MELSLEVLGLLFLVAGVAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFSATLYFVRKGVVSLKAMRLAI
ACTFVGAALGAEAVQYIDATLLTSLIPLLLLGISLYFLLAPTTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIF
TVCFVALGHFSLVEATARTKVLNFTSNIAALTFFLIAGLPIWEIGLTMAVGGFIGARMGAKVVISKGQRWIRPLVITMSM
LMALKLLWEQHHAALLSMLGL

Sequences:

>Translated_261_residues
MELSLEVLGLLFLVAGVAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFSATLYFVRKGVVSLKAMRLAI
ACTFVGAALGAEAVQYIDATLLTSLIPLLLLGISLYFLLAPTTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIF
TVCFVALGHFSLVEATARTKVLNFTSNIAALTFFLIAGLPIWEIGLTMAVGGFIGARMGAKVVISKGQRWIRPLVITMSM
LMALKLLWEQHHAALLSMLGL
>Mature_261_residues
MELSLEVLGLLFLVAGVAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFSATLYFVRKGVVSLKAMRLAI
ACTFVGAALGAEAVQYIDATLLTSLIPLLLLGISLYFLLAPTTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIF
TVCFVALGHFSLVEATARTKVLNFTSNIAALTFFLIAGLPIWEIGLTMAVGGFIGARMGAKVVISKGQRWIRPLVITMSM
LMALKLLWEQHHAALLSMLGL

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=255, Percent_Identity=50.9803921568627, Blast_Score=240, Evalue=6e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27293; Mature: 27293

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MELSLEVLGLLFLVAGVAGFIDAMAGGGGLLTLPALLAAGVPPTQALATNKLQSSFGSFS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
ATLYFVRKGVVSLKAMRLAIACTFVGAALGAEAVQYIDATLLTSLIPLLLLGISLYFLLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PTTKTHTGPAPLSETAFAFTVGFGIGFYDGFFGPGTGSIFTVCFVALGHFSLVEATARTK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VLNFTSNIAALTFFLIAGLPIWEIGLTMAVGGFIGARMGAKVVISKGQRWIRPLVITMSM
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHH
LMALKLLWEQHHAALLSMLGL
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]