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The map label for this gene is yfiH [C]

Identifier: 147674392

GI number: 147674392

Start: 249604

End: 250326

Strand: Direct

Name: yfiH [C]

Synonym: VC0395_A0239

Alternate gene names: 147674392

Gene position: 249604-250326 (Clockwise)

Preceding gene: 147673459

Following gene: 147675005

Centisome position: 8.25

GC content: 50.35

Gene sequence:

>723_bases
ATGATTCTCCCCAACTGGAATGCACCCAAACAAGTCAAAGCGTTTAGTTCGACTCGCCAAGGTGGTTTTTCGCAAGGCGC
TTATCAAGGGTTAAACCTTGGTATGCATGTTGGGGACGATCCTGTACTTGTACTGCGTAATCGGCAATCGTTGGTGGAAA
TATCCGCGATGCCAAGCTCACCCATTTGGCTAAACCAGACCCATTCCACAGTGGTACTCGATGTTGATGCTCCGACTGAA
CAAGTGTTGGATGCCGATGGCCTCATCACTTCAACGCCGAATGTGGTGTGCTCAGCGATGACGGCCGATTGCCTGCCAGT
ATTAATGACCAATCGTACTGGTACCCAAGTCGCGGCTGTACATGCCGGTTGGCGTGGTTTGGTCAATGGTATTGTTGAAC
ACACAGCGGCAAGAATGTCTGGCGATGTCATGGTGTGGCTTGGCCCTGCAATTGGCGCGCAGGCGTTTGAAGTGGGGGAA
GATGTTTTCGCCGCTTTTGTTGCTCACCATCCTCAAGCCGAATACGCTTTCACTCCTCGTGCACAACAAGGGAAATGGCT
GGCGGATATGAGCCAATTAGTCAAACTGCGTTTGCAAGAACTTGGGATTGAACAAGTCTTTGATAGTGGCTTGTGCACTT
ATCAGGATGCTGAGCGTTTTTATTCCTACCGCCGCGATGGAGTAACAGGACGCCAAGCCGCTTTTATTTGGCTTGAAGAG
TAA

Upstream 100 bases:

>100_bases
AAGAGCTCGAATTCCATGCACCAGTGCCTGATGATATGGTTGAGATGACGCTTGCACTGCGTGAAGATGCGAAGCTAAAC
CGCACTGAAGAGTATTAATC

Downstream 100 bases:

>100_bases
GCCTTCATCCATACCCATATCAAACAACAAGAAAGTTTCCTCAACTTCCCTTGAAAATCTGGTTCGTGATAACCATCTTT
CCTAACGTATTCAATTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MILPNWNAPKQVKAFSSTRQGGFSQGAYQGLNLGMHVGDDPVLVLRNRQSLVEISAMPSSPIWLNQTHSTVVLDVDAPTE
QVLDADGLITSTPNVVCSAMTADCLPVLMTNRTGTQVAAVHAGWRGLVNGIVEHTAARMSGDVMVWLGPAIGAQAFEVGE
DVFAAFVAHHPQAEYAFTPRAQQGKWLADMSQLVKLRLQELGIEQVFDSGLCTYQDAERFYSYRRDGVTGRQAAFIWLEE

Sequences:

>Translated_240_residues
MILPNWNAPKQVKAFSSTRQGGFSQGAYQGLNLGMHVGDDPVLVLRNRQSLVEISAMPSSPIWLNQTHSTVVLDVDAPTE
QVLDADGLITSTPNVVCSAMTADCLPVLMTNRTGTQVAAVHAGWRGLVNGIVEHTAARMSGDVMVWLGPAIGAQAFEVGE
DVFAAFVAHHPQAEYAFTPRAQQGKWLADMSQLVKLRLQELGIEQVFDSGLCTYQDAERFYSYRRDGVTGRQAAFIWLEE
>Mature_240_residues
MILPNWNAPKQVKAFSSTRQGGFSQGAYQGLNLGMHVGDDPVLVLRNRQSLVEISAMPSSPIWLNQTHSTVVLDVDAPTE
QVLDADGLITSTPNVVCSAMTADCLPVLMTNRTGTQVAAVHAGWRGLVNGIVEHTAARMSGDVMVWLGPAIGAQAFEVGE
DVFAAFVAHHPQAEYAFTPRAQQGKWLADMSQLVKLRLQELGIEQVFDSGLCTYQDAERFYSYRRDGVTGRQAAFIWLEE

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=170, Percent_Identity=28.8235294117647, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI190194372, Length=170, Percent_Identity=28.8235294117647, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI1788945, Length=242, Percent_Identity=49.1735537190083, Blast_Score=232, Evalue=2e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26205; Mature: 26205

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILPNWNAPKQVKAFSSTRQGGFSQGAYQGLNLGMHVGDDPVLVLRNRQSLVEISAMPSS
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEEEEECCCCC
PIWLNQTHSTVVLDVDAPTEQVLDADGLITSTPNVVCSAMTADCLPVLMTNRTGTQVAAV
CEEEECCCCEEEEECCCCHHHHHCCCCCEECCCHHHHHHHHHHHHHHEEECCCCCEEEEE
HAGWRGLVNGIVEHTAARMSGDVMVWLGPAIGAQAFEVGEDVFAAFVAHHPQAEYAFTPR
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCC
AQQGKWLADMSQLVKLRLQELGIEQVFDSGLCTYQDAERFYSYRRDGVTGRQAAFIWLEE
CCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEC
>Mature Secondary Structure
MILPNWNAPKQVKAFSSTRQGGFSQGAYQGLNLGMHVGDDPVLVLRNRQSLVEISAMPSS
CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCEEEEECCCCC
PIWLNQTHSTVVLDVDAPTEQVLDADGLITSTPNVVCSAMTADCLPVLMTNRTGTQVAAV
CEEEECCCCEEEEECCCCHHHHHCCCCCEECCCHHHHHHHHHHHHHHEEECCCCCEEEEE
HAGWRGLVNGIVEHTAARMSGDVMVWLGPAIGAQAFEVGEDVFAAFVAHHPQAEYAFTPR
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCC
AQQGKWLADMSQLVKLRLQELGIEQVFDSGLCTYQDAERFYSYRRDGVTGRQAAFIWLEE
CCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]