| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is yfiL [C]
Identifier: 147674079
GI number: 147674079
Start: 226312
End: 226653
Strand: Direct
Name: yfiL [C]
Synonym: VC0395_A0219
Alternate gene names: 147674079
Gene position: 226312-226653 (Clockwise)
Preceding gene: 147673232
Following gene: 147674441
Centisome position: 7.48
GC content: 46.2
Gene sequence:
>342_bases ATGAAAAAATGGATAGTAATGGGCTGTATTGTGCTGCTTGCCGCTTGTGCAGCGAGTGAGTCACAGTTAGTACAAGAGGG CAACTGGTATCAAATCGGTTATCAGGATGCCGTGACTGGTCATACCCAGCGCAGCTATAAAAGCTTAATGGCGCTCGGCT CAGCCAAATTGGGTGATTATGAACAAGGCTACCAAAAGGGATTAGAGCAATATTGTAACCCTGATGTGGCTTACCAAATT GGCTTGAGCGGCCAATACTATGAAGGAATTTGTGAAGGTACAGAGCAGGCGCAGCGTTTTCGTATGGAGTGGCAACGCGG TTGGAATGAGTACAATCAATAA
Upstream 100 bases:
>100_bases AAAGCCGCGACGCGAGCATGAAAATTGAGTAGCAGGCTATGCTATTCAATGGCATGCTCATTTCATCAACAAAATGCGTT CGTCTAACTCAAGGTAAAAC
Downstream 100 bases:
>100_bases CCGATAAGAGGTGCAATCATGCACGAAGAGTCTATTGCTCTGACTATCGCTGCGGTTGGCGTAGTCGGTTTAGGATGTCA GTGGTTAGCCTGGCGGTTAC
Product: putative lipoprotein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MKKWIVMGCIVLLAACAASESQLVQEGNWYQIGYQDAVTGHTQRSYKSLMALGSAKLGDYEQGYQKGLEQYCNPDVAYQI GLSGQYYEGICEGTEQAQRFRMEWQRGWNEYNQ
Sequences:
>Translated_113_residues MKKWIVMGCIVLLAACAASESQLVQEGNWYQIGYQDAVTGHTQRSYKSLMALGSAKLGDYEQGYQKGLEQYCNPDVAYQI GLSGQYYEGICEGTEQAQRFRMEWQRGWNEYNQ >Mature_113_residues MKKWIVMGCIVLLAACAASESQLVQEGNWYQIGYQDAVTGHTQRSYKSLMALGSAKLGDYEQGYQKGLEQYCNPDVAYQI GLSGQYYEGICEGTEQAQRFRMEWQRGWNEYNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082135, Length=113, Percent_Identity=28.3185840707965, Blast_Score=61, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12911; Mature: 12911
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKWIVMGCIVLLAACAASESQLVQEGNWYQIGYQDAVTGHTQRSYKSLMALGSAKLGDY CCHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECCHHHHCCCHHHHHHHHHHHCCCCCCCH EQGYQKGLEQYCNPDVAYQIGLSGQYYEGICEGTEQAQRFRMEWQRGWNEYNQ HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKWIVMGCIVLLAACAASESQLVQEGNWYQIGYQDAVTGHTQRSYKSLMALGSAKLGDY CCHHHHHHHHHHHHHHCCCHHHHHHCCCEEEECCHHHHCCCHHHHHHHHHHHCCCCCCCH EQGYQKGLEQYCNPDVAYQIGLSGQYYEGICEGTEQAQRFRMEWQRGWNEYNQ HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA