| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is exoP [H]
Identifier: 146343828
GI number: 146343828
Start: 7390663
End: 7392942
Strand: Reverse
Name: exoP [H]
Synonym: BRADO7077
Alternate gene names: 146343828
Gene position: 7392942-7390663 (Counterclockwise)
Preceding gene: 146343829
Following gene: 146343827
Centisome position: 99.15
GC content: 68.2
Gene sequence:
>2280_bases GTGCGAGTGCAGATCATGAGGCAGGCGGCGCTCAACGAGGCCCTCTCCGGCTTTGATGCCGTTGCACGGATCTGGCGTCG TCGCGGCGTGTTCGCGCTCGTCGCCGGTGCCGTGCTTGCGCTCGCCGCGGTCGCGCTCGTCGTGCTGCCGGTGCGTTATC TCGCGACGGCCTCCGTGATCATCGCCGAGCAGGAGCCGGGTGCCAATACGTCGGCGGCGTGGGCGCAGAAGATCGGCGAT CCCGCCGACATGGAAAGCCAGCTGCTGGTGATCCGTTCGCCGCGCCTGCTGCGGCAGATCATGTCGACCCCCGGCGTCGT CGACGCCGTCGTCGGCGAATGCGAGCGTGGCCGCATGTGGGGCTCGGCGGATGCCTGCCAGCGCCTCAGCACCGATCCGA GCGCGTTCATCGATCACGTCGACAGCCGCTTCAGCGTTGCCTCTGCCGGCCGGTCGCGGGTGATCAACATCTCCTATCAG TCGGGCAGCCCCGAGGCGGCGAAATTGCTCGCCAATGCGCTGACGCAGACTTTCCTCGAGGATCAGCGCACCGAGGGCGC CAACAGCCGGGAGGTGGCGAGTTCCTGGCTGTGGCAGGAGCTCAAGCAGCTCGATCAGCAGCTGCGCGAGGCCGACGACA AGATCCAGAAATTTCGCCGCACCAAGGGCCTGATGCGCGGCGCCAACGCGCCGATCTCCTCGGAGCGGCTGACCAGCATC GGGCAGCAGCTGTCGCAGGCGGAGGCGGCGCGTGCGGACGCCGCGGCGCGCCTCCAGGAGATCAAGTCGGAGCAGCAGCG CGGGCCGACTGATGCGCCCTCCGTGCTGCAAAGCCGGACCATCGCCGACCTCAAGCAGCAGCTGACCACCGTCAGCGCGC AACTGGCCAGCGCTGCAGGCGTTCTCGGGCCCAAGCATCCCTCGATCCTGGCGCTGACGCGCGAGCAGGCAACGATCCAG CAGCGCCTCGTAGAGGAGATGCAGACCATCGCGGCGAGCGCGCAGAAGACCTTCGACGCCAACAACGCGCTGGTGAACTC GCTCAAGAAGCAGATGGACACGGCGAAGGCCGAGGCCGGCTCGGCCACTCTGGACGAAGCGTCCATCGAGAGCATGGTGC GCGACACCGAGATCAAGCGCCAGCAATATGCCGAGCTCTACAAGAAGGCGAGCGAGCTCGAGACAGAGCGACGCGTCCTG CGCGGCAGCACGCGGCTCGTCAGTCTGGCCGAATTGCCGAGCAAGCCGTTCTTCCCGAAGAAGGCACCGTTCCTCGCGGC CGGCCTGACGCTTGCGATCATCTTCGGTGTCGCGGCTGCGCTGCTCGCCGATCAGCTCGCGCGCCTGGGTCCGAAGCTCA AGCGCGCGCCGGCTGCTGCGGAGCCGGTCAACGACGTCGTGCTCGCCCCGGTGGCCGATGCGCCGGCGAGCGTCCCTGAT CTTGCGGAGCCGGTGGTCGCGCCGACGGTATCGAGCGCGCCATCATCGTCTCCCGAGCGGAGGTCGCATCTTCCCAGCGT GGCCGATGTCTCAATCCTCACCTGCCTGCCGCGGCTGAAGACGCTGCGGCAGATGTCCGCGCTCGGAGCGATCCTGCAGG GCTATCAGCCGCTCGCGGTTCCGCAGGTCCTGCGCCTTGCTTCGGAGGATGGCGAATTCCAGCAGACGCTGCACGACCTC GTCCACGAACTCGGCCTTGATCAGGCCACAGCGCCGCAGCGCATCGCGGTTACCTCGCCGGAAGCCGGCGATGGCAAGAC GGTGACGGTCTGCGCGCTTGCCGAGCATCTTGCCGCCGCGGGATCTCGCGTGCTGCTGGTGGAGTGCGATCTCGCCAATC CCGCTTTCGCGCCAGTGATGATGCTGCCGCCGGGGCGTGGCTGGCTGCGCGCGCTGGAGCTGGGCAGGCCGCTACGTGCG GAAGTCCTGACGACTGAGCATCCGCATCTGGATGTGCTGCCGCTCGGCGCCGCATCCGGAGCCGTCGGGGATATTCTCGA AGCCATCACGCTTGAGACGCTGCTATCCGGAGTCGAGGGCTACGACGTCATCCTGATCGACACCCCGCTGCCGGCCCGCG CCGATTTCCTGGCGGGCATCGACTGGGCGATCGTCTGCGTGCGCAGCGACCGGTCGCTGATCGAGCCCGCCGTGACCACG GTGAACCGGAGCAGGGCGCTGGGCGCCGGCGATGTCGGCATCGTCGTCACGATGACCGAGTCCGAGAAGCGCGTGGCGTC CCACCCGGTCGCGGCTGCAGCCTATGCCGAGGCCGGATGA
Upstream 100 bases:
>100_bases CCGCAGCCAGTTCGTCGCGGCGGTCAACGAAGAGCTCGACAATTTCCGCGATGGCCATCACGGCCGCGCGACGCGGCTGA TTGCGTAGTGTTGCGATGGG
Downstream 100 bases:
>100_bases TGTCGCGCGAACGCGTCCTGTTTGTCGATCACACCGGACAGATCGGCGGCGCCGAGCTGATCCTGCTCGACGTCGTGCAG GGGCGCAACGAGTCTTCGGC
Product: putative lipopolysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 759; Mature: 759
Protein sequence:
>759_residues MRVQIMRQAALNEALSGFDAVARIWRRRGVFALVAGAVLALAAVALVVLPVRYLATASVIIAEQEPGANTSAAWAQKIGD PADMESQLLVIRSPRLLRQIMSTPGVVDAVVGECERGRMWGSADACQRLSTDPSAFIDHVDSRFSVASAGRSRVINISYQ SGSPEAAKLLANALTQTFLEDQRTEGANSREVASSWLWQELKQLDQQLREADDKIQKFRRTKGLMRGANAPISSERLTSI GQQLSQAEAARADAAARLQEIKSEQQRGPTDAPSVLQSRTIADLKQQLTTVSAQLASAAGVLGPKHPSILALTREQATIQ QRLVEEMQTIAASAQKTFDANNALVNSLKKQMDTAKAEAGSATLDEASIESMVRDTEIKRQQYAELYKKASELETERRVL RGSTRLVSLAELPSKPFFPKKAPFLAAGLTLAIIFGVAAALLADQLARLGPKLKRAPAAAEPVNDVVLAPVADAPASVPD LAEPVVAPTVSSAPSSSPERRSHLPSVADVSILTCLPRLKTLRQMSALGAILQGYQPLAVPQVLRLASEDGEFQQTLHDL VHELGLDQATAPQRIAVTSPEAGDGKTVTVCALAEHLAAAGSRVLLVECDLANPAFAPVMMLPPGRGWLRALELGRPLRA EVLTTEHPHLDVLPLGAASGAVGDILEAITLETLLSGVEGYDVILIDTPLPARADFLAGIDWAIVCVRSDRSLIEPAVTT VNRSRALGAGDVGIVVTMTESEKRVASHPVAAAAYAEAG
Sequences:
>Translated_759_residues MRVQIMRQAALNEALSGFDAVARIWRRRGVFALVAGAVLALAAVALVVLPVRYLATASVIIAEQEPGANTSAAWAQKIGD PADMESQLLVIRSPRLLRQIMSTPGVVDAVVGECERGRMWGSADACQRLSTDPSAFIDHVDSRFSVASAGRSRVINISYQ SGSPEAAKLLANALTQTFLEDQRTEGANSREVASSWLWQELKQLDQQLREADDKIQKFRRTKGLMRGANAPISSERLTSI GQQLSQAEAARADAAARLQEIKSEQQRGPTDAPSVLQSRTIADLKQQLTTVSAQLASAAGVLGPKHPSILALTREQATIQ QRLVEEMQTIAASAQKTFDANNALVNSLKKQMDTAKAEAGSATLDEASIESMVRDTEIKRQQYAELYKKASELETERRVL RGSTRLVSLAELPSKPFFPKKAPFLAAGLTLAIIFGVAAALLADQLARLGPKLKRAPAAAEPVNDVVLAPVADAPASVPD LAEPVVAPTVSSAPSSSPERRSHLPSVADVSILTCLPRLKTLRQMSALGAILQGYQPLAVPQVLRLASEDGEFQQTLHDL VHELGLDQATAPQRIAVTSPEAGDGKTVTVCALAEHLAAAGSRVLLVECDLANPAFAPVMMLPPGRGWLRALELGRPLRA EVLTTEHPHLDVLPLGAASGAVGDILEAITLETLLSGVEGYDVILIDTPLPARADFLAGIDWAIVCVRSDRSLIEPAVTT VNRSRALGAGDVGIVVTMTESEKRVASHPVAAAAYAEAG >Mature_759_residues MRVQIMRQAALNEALSGFDAVARIWRRRGVFALVAGAVLALAAVALVVLPVRYLATASVIIAEQEPGANTSAAWAQKIGD PADMESQLLVIRSPRLLRQIMSTPGVVDAVVGECERGRMWGSADACQRLSTDPSAFIDHVDSRFSVASAGRSRVINISYQ SGSPEAAKLLANALTQTFLEDQRTEGANSREVASSWLWQELKQLDQQLREADDKIQKFRRTKGLMRGANAPISSERLTSI GQQLSQAEAARADAAARLQEIKSEQQRGPTDAPSVLQSRTIADLKQQLTTVSAQLASAAGVLGPKHPSILALTREQATIQ QRLVEEMQTIAASAQKTFDANNALVNSLKKQMDTAKAEAGSATLDEASIESMVRDTEIKRQQYAELYKKASELETERRVL RGSTRLVSLAELPSKPFFPKKAPFLAAGLTLAIIFGVAAALLADQLARLGPKLKRAPAAAEPVNDVVLAPVADAPASVPD LAEPVVAPTVSSAPSSSPERRSHLPSVADVSILTCLPRLKTLRQMSALGAILQGYQPLAVPQVLRLASEDGEFQQTLHDL VHELGLDQATAPQRIAVTSPEAGDGKTVTVCALAEHLAAAGSRVLLVECDLANPAFAPVMMLPPGRGWLRALELGRPLRA EVLTTEHPHLDVLPLGAASGAVGDILEAITLETLLSGVEGYDVILIDTPLPARADFLAGIDWAIVCVRSDRSLIEPAVTT VNRSRALGAGDVGIVVTMTESEKRVASHPVAAAAYAEAG
Specific function: Unknown
COG id: COG3206
COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.solanacearum epsB [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR005702 - InterPro: IPR005700 - InterPro: IPR003856 [H]
Pfam domain/function: PF01656 CbiA; PF02706 Wzz [H]
EC number: NA
Molecular weight: Translated: 80777; Mature: 80777
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVQIMRQAALNEALSGFDAVARIWRRRGVFALVAGAVLALAAVALVVLPVRYLATASVI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE IAEQEPGANTSAAWAQKIGDPADMESQLLVIRSPRLLRQIMSTPGVVDAVVGECERGRMW EEECCCCCCCHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCHHHHHHCCHHCCCCC GSADACQRLSTDPSAFIDHVDSRFSVASAGRSRVINISYQSGSPEAAKLLANALTQTFLE CCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH DQRTEGANSREVASSWLWQELKQLDQQLREADDKIQKFRRTKGLMRGANAPISSERLTSI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH GQQLSQAEAARADAAARLQEIKSEQQRGPTDAPSVLQSRTIADLKQQLTTVSAQLASAAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VLGPKHPSILALTREQATIQQRLVEEMQTIAASAQKTFDANNALVNSLKKQMDTAKAEAG CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC SATLDEASIESMVRDTEIKRQQYAELYKKASELETERRVLRGSTRLVSLAELPSKPFFPK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHCCCCCCCCC KAPFLAAGLTLAIIFGVAAALLADQLARLGPKLKRAPAAAEPVNDVVLAPVADAPASVPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEECCCCCCCCCCH LAEPVVAPTVSSAPSSSPERRSHLPSVADVSILTCLPRLKTLRQMSALGAILQGYQPLAV HHCCHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH PQVLRLASEDGEFQQTLHDLVHELGLDQATAPQRIAVTSPEAGDGKTVTVCALAEHLAAA HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHC GSRVLLVECDLANPAFAPVMMLPPGRGWLRALELGRPLRAEVLTTEHPHLDVLPLGAASG CCEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCC AVGDILEAITLETLLSGVEGYDVILIDTPLPARADFLAGIDWAIVCVRSDRSLIEPAVTT HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCEEEEEEECCCHHHHHHHHH VNRSRALGAGDVGIVVTMTESEKRVASHPVAAAAYAEAG HHHHHCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHCCC >Mature Secondary Structure MRVQIMRQAALNEALSGFDAVARIWRRRGVFALVAGAVLALAAVALVVLPVRYLATASVI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE IAEQEPGANTSAAWAQKIGDPADMESQLLVIRSPRLLRQIMSTPGVVDAVVGECERGRMW EEECCCCCCCHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCHHHHHHCCHHCCCCC GSADACQRLSTDPSAFIDHVDSRFSVASAGRSRVINISYQSGSPEAAKLLANALTQTFLE CCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH DQRTEGANSREVASSWLWQELKQLDQQLREADDKIQKFRRTKGLMRGANAPISSERLTSI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH GQQLSQAEAARADAAARLQEIKSEQQRGPTDAPSVLQSRTIADLKQQLTTVSAQLASAAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VLGPKHPSILALTREQATIQQRLVEEMQTIAASAQKTFDANNALVNSLKKQMDTAKAEAG CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC SATLDEASIESMVRDTEIKRQQYAELYKKASELETERRVLRGSTRLVSLAELPSKPFFPK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHCCCCCCCCC KAPFLAAGLTLAIIFGVAAALLADQLARLGPKLKRAPAAAEPVNDVVLAPVADAPASVPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCEEEECCCCCCCCCCH LAEPVVAPTVSSAPSSSPERRSHLPSVADVSILTCLPRLKTLRQMSALGAILQGYQPLAV HHCCHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH PQVLRLASEDGEFQQTLHDLVHELGLDQATAPQRIAVTSPEAGDGKTVTVCALAEHLAAA HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEHHHHHHHHHHHC GSRVLLVECDLANPAFAPVMMLPPGRGWLRALELGRPLRAEVLTTEHPHLDVLPLGAASG CCEEEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCC AVGDILEAITLETLLSGVEGYDVILIDTPLPARADFLAGIDWAIVCVRSDRSLIEPAVTT HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHCCCEEEEEEECCCHHHHHHHHH VNRSRALGAGDVGIVVTMTESEKRVASHPVAAAAYAEAG HHHHHCCCCCCCEEEEEECCCHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8226645; 8226646; 8246891; 11481431 [H]