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The map label for this gene is ybeQ [H]

Identifier: 146343786

GI number: 146343786

Start: 7339392

End: 7341344

Strand: Reverse

Name: ybeQ [H]

Synonym: BRADO7034

Alternate gene names: 146343786

Gene position: 7341344-7339392 (Counterclockwise)

Preceding gene: 146343787

Following gene: 146343785

Centisome position: 98.45

GC content: 72.56

Gene sequence:

>1953_bases
ATGGGTGCAATCCAACGGGTGCTGTCGCGGGTAAGCGCGGCGCTGCCGCTCGGCGCCACGGTCGACGCCGGCGCCGAGCG
TCACGAGGCCGGCGAATACCTCGATGCGATCCGGATCTGGCGGCGGGCCGCCACCTCCGGTTCCGCGGAATCGGCGTTCC
GCATCGGCCAGATGTACGCGAAGGGCGAAGGCGTCGTCCGCTCCTTCCCCGACGCCGCCGCTTGGTATCGCCGCGCCGCG
GAGGCCGGGCACACCGAGGCGAAATATCAGCTCGGCTGGATGCTGCTCGATGGCGTCGCCGCGCCGGTCGGTCCCAACAC
CCCCGAGGCGTGGCAGCGGGAGGCCGCAGACAATGGCGAGACGCCCGCGGTTGCGCGTCTGCTGTTCCCCGCCGGGCTTG
CGGTCGAGAGAGACCCCGCGCAGGCGGTCCGCTGGATATCCGCAGCCGCAACCGCCGGCCATGCCGATGCACAGGCGCGC
ATGGGCGAGCTCTGCCGCCACGGCCGCGGCTGCCCCCGCGATCTCGACGCTGCCCGCGACTGGTATGGCAAGGCCGCGGC
GCAGGGCCACGCCGGCGGCGCGTTCGGCCTCGGTGATATCTATTTCCAGGGCCTCGGCGTCTCAGCCGACCCTGCGGCCG
CGATCGGCTGGTACCGCCAGGCCGCCGAAGCCGGCCACGCCCGCGCCCAGGTGGCGCTGGCCTCCTGCTATCAGAACGGC
ACCGGGGTCGCGCAGGACCGCGCTGAGGCCGTCAGGCTCTATGCCGAGGCGGCGCGCCACGACGACGTGCTGGCGCTGCA
TTGCCTCGGCCTCGCCTTTCTCTCCGGCGACGGCGTCGCCCAGTCGATCGACCGCGCCGAGACCGCGCTGCGCAAGGGGG
CGCGCAAGGGCCATCTGCCGGCGATCCAGGCGCTGGCGGAGTTCTATGCCCGCGGCCTCGGCGGCGAGCCCGATCTGCGC
GAGGCCGCGCAATGGTATCAGGCTGCGGCCGAGAAGGGCGACGTACAGGCGCAATTCTTCACCGGGCGCTTCTATGCCAC
CGGCAGCGGCGTCGCGCCGAGCGTGCGCGAGGCGGCCAAATGGTTCCTGCGCGCGGCCGAGGGCGGCCACGCCACCGCGG
CCTTCAACATCGCCGTGTTCTATCGCGACGGCACCGGAATCGCCCGCGACGTGCCTGCCGCCATCTCCTGGTTCGAGAAG
GCCTCCGCCGCCGGCATCAGCGCCGCCGACATCCAGCTCGGCCGCATCTACGCCGCCGGCGCCGGCATCGAGCGCGATCC
CGCCCGCGCGGCGCACTGGCTGGCCAAGGCCGCCGAGGGCGGCGACGCCGAGGCGCGCACGGCGCTCGCGCTGGTCCTGC
TGCAATCCGACCGCACCGACGAGGCCCGCGCCCGCGCCGCCGCGCTGCTGACGGATGCCGCCGGGTCCGGGCATGCGCCG
GCCGGCCTGCAACTCGGCCATCTCAAGGCCGGCCGCTTCGGCGGCGCGCCGGATTGGCCGGCCGCGGCCGCGTGCTATGC
GCCGGCCGCCGAAGCCGGCCTGGTCGAGGCGATGGTCGCGCTCGCCGGACTTCACCTTGACACGGCTTCGGCCCTCACCG
ATGCGAAGGCCGCCTTCGCCTGGTTCGAGAAGGCCGCTCGGGCCGGCCACGCGCCCTCGGCGTTCCAGCTCGGCGTGATG
TACTGCACCGGGAACGGCGTCGACATGGATCTCGCCCAGGGCGTCGCCTGGTACGAGGCCGCCGCCCGCGAGGGCCATCC
CTTCGCGCAATACAATCTCGCTGTCATGCTGTCCAAAGGCCAGGGCTGCGAGCGTGATCAGGTGAAGGCCGTCGAGTGGC
TCCGTGCTGCTGCCGAGAAGGGCATGGCTGCTGCGCAGCGAGCGCTGGGTGCAAACGTCGATGTGCCTGCAACTGGACTT
TCGTTTTCCGAAGGAGGAAGCGAGAAGACTTAA

Upstream 100 bases:

>100_bases
TCAACATCGGTACACGCTCGGCGGCCATGTATGTGCTCGGCAGCATGCTACACGGTTTAGGACAGGCGATGCGCGAGCCG
TGAGCAGGCAGGCGGACTGA

Downstream 100 bases:

>100_bases
GTTCGAGCCGAGACGAACTGAGCGGTTAAAGCACGGAATATTGCCTGTTCTTACGAACGCATTGGTCCAGAGCTTTGAAC
GCAACTCGCCAGTGTACTGA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 650; Mature: 649

Protein sequence:

>650_residues
MGAIQRVLSRVSAALPLGATVDAGAERHEAGEYLDAIRIWRRAATSGSAESAFRIGQMYAKGEGVVRSFPDAAAWYRRAA
EAGHTEAKYQLGWMLLDGVAAPVGPNTPEAWQREAADNGETPAVARLLFPAGLAVERDPAQAVRWISAAATAGHADAQAR
MGELCRHGRGCPRDLDAARDWYGKAAAQGHAGGAFGLGDIYFQGLGVSADPAAAIGWYRQAAEAGHARAQVALASCYQNG
TGVAQDRAEAVRLYAEAARHDDVLALHCLGLAFLSGDGVAQSIDRAETALRKGARKGHLPAIQALAEFYARGLGGEPDLR
EAAQWYQAAAEKGDVQAQFFTGRFYATGSGVAPSVREAAKWFLRAAEGGHATAAFNIAVFYRDGTGIARDVPAAISWFEK
ASAAGISAADIQLGRIYAAGAGIERDPARAAHWLAKAAEGGDAEARTALALVLLQSDRTDEARARAAALLTDAAGSGHAP
AGLQLGHLKAGRFGGAPDWPAAAACYAPAAEAGLVEAMVALAGLHLDTASALTDAKAAFAWFEKAARAGHAPSAFQLGVM
YCTGNGVDMDLAQGVAWYEAAAREGHPFAQYNLAVMLSKGQGCERDQVKAVEWLRAAAEKGMAAAQRALGANVDVPATGL
SFSEGGSEKT

Sequences:

>Translated_650_residues
MGAIQRVLSRVSAALPLGATVDAGAERHEAGEYLDAIRIWRRAATSGSAESAFRIGQMYAKGEGVVRSFPDAAAWYRRAA
EAGHTEAKYQLGWMLLDGVAAPVGPNTPEAWQREAADNGETPAVARLLFPAGLAVERDPAQAVRWISAAATAGHADAQAR
MGELCRHGRGCPRDLDAARDWYGKAAAQGHAGGAFGLGDIYFQGLGVSADPAAAIGWYRQAAEAGHARAQVALASCYQNG
TGVAQDRAEAVRLYAEAARHDDVLALHCLGLAFLSGDGVAQSIDRAETALRKGARKGHLPAIQALAEFYARGLGGEPDLR
EAAQWYQAAAEKGDVQAQFFTGRFYATGSGVAPSVREAAKWFLRAAEGGHATAAFNIAVFYRDGTGIARDVPAAISWFEK
ASAAGISAADIQLGRIYAAGAGIERDPARAAHWLAKAAEGGDAEARTALALVLLQSDRTDEARARAAALLTDAAGSGHAP
AGLQLGHLKAGRFGGAPDWPAAAACYAPAAEAGLVEAMVALAGLHLDTASALTDAKAAFAWFEKAARAGHAPSAFQLGVM
YCTGNGVDMDLAQGVAWYEAAAREGHPFAQYNLAVMLSKGQGCERDQVKAVEWLRAAAEKGMAAAQRALGANVDVPATGL
SFSEGGSEKT
>Mature_649_residues
GAIQRVLSRVSAALPLGATVDAGAERHEAGEYLDAIRIWRRAATSGSAESAFRIGQMYAKGEGVVRSFPDAAAWYRRAAE
AGHTEAKYQLGWMLLDGVAAPVGPNTPEAWQREAADNGETPAVARLLFPAGLAVERDPAQAVRWISAAATAGHADAQARM
GELCRHGRGCPRDLDAARDWYGKAAAQGHAGGAFGLGDIYFQGLGVSADPAAAIGWYRQAAEAGHARAQVALASCYQNGT
GVAQDRAEAVRLYAEAARHDDVLALHCLGLAFLSGDGVAQSIDRAETALRKGARKGHLPAIQALAEFYARGLGGEPDLRE
AAQWYQAAAEKGDVQAQFFTGRFYATGSGVAPSVREAAKWFLRAAEGGHATAAFNIAVFYRDGTGIARDVPAAISWFEKA
SAAGISAADIQLGRIYAAGAGIERDPARAAHWLAKAAEGGDAEARTALALVLLQSDRTDEARARAAALLTDAAGSGHAPA
GLQLGHLKAGRFGGAPDWPAAAACYAPAAEAGLVEAMVALAGLHLDTASALTDAKAAFAWFEKAARAGHAPSAFQLGVMY
CTGNGVDMDLAQGVAWYEAAAREGHPFAQYNLAVMLSKGQGCERDQVKAVEWLRAAAEKGMAAAQRALGANVDVPATGLS
FSEGGSEKT

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=529, Percent_Identity=26.6540642722117, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI151301150, Length=513, Percent_Identity=24.5614035087719, Blast_Score=90, Evalue=8e-18,
Organism=Escherichia coli, GI87081769, Length=284, Percent_Identity=33.4507042253521, Blast_Score=127, Evalue=2e-30,
Organism=Escherichia coli, GI1786867, Length=113, Percent_Identity=39.8230088495575, Blast_Score=80, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17563256, Length=561, Percent_Identity=24.9554367201426, Blast_Score=93, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6319410, Length=287, Percent_Identity=25.7839721254355, Blast_Score=70, Evalue=8e-13,
Organism=Drosophila melanogaster, GI21355295, Length=467, Percent_Identity=27.1948608137045, Blast_Score=105, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 67542; Mature: 67411

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAIQRVLSRVSAALPLGATVDAGAERHEAGEYLDAIRIWRRAATSGSAESAFRIGQMYA
CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KGEGVVRSFPDAAAWYRRAAEAGHTEAKYQLGWMLLDGVAAPVGPNTPEAWQREAADNGE
CCCCHHHCCCHHHHHHHHHHHCCCCCHHHHEHHHEECCCCCCCCCCCHHHHHHHHCCCCC
TPAVARLLFPAGLAVERDPAQAVRWISAAATAGHADAQARMGELCRHGRGCPRDLDAARD
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
WYGKAAAQGHAGGAFGLGDIYFQGLGVSADPAAAIGWYRQAAEAGHARAQVALASCYQNG
HHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCC
TGVAQDRAEAVRLYAEAARHDDVLALHCLGLAFLSGDGVAQSIDRAETALRKGARKGHLP
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCH
AIQALAEFYARGLGGEPDLREAAQWYQAAAEKGDVQAQFFTGRFYATGSGVAPSVREAAK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHH
WFLRAAEGGHATAAFNIAVFYRDGTGIARDVPAAISWFEKASAAGISAADIQLGRIYAAG
HHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECEEEECC
AGIERDPARAAHWLAKAAEGGDAEARTALALVLLQSDRTDEARARAAALLTDAAGSGHAP
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
AGLQLGHLKAGRFGGAPDWPAAAACYAPAAEAGLVEAMVALAGLHLDTASALTDAKAAFA
CCCEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
WFEKAARAGHAPSAFQLGVMYCTGNGVDMDLAQGVAWYEAAAREGHPFAQYNLAVMLSKG
HHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHCHHHHHHHHHCCCCCCEEEEEEEEECC
QGCERDQVKAVEWLRAAAEKGMAAAQRALGANVDVPATGLSFSEGGSEKT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GAIQRVLSRVSAALPLGATVDAGAERHEAGEYLDAIRIWRRAATSGSAESAFRIGQMYA
CHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KGEGVVRSFPDAAAWYRRAAEAGHTEAKYQLGWMLLDGVAAPVGPNTPEAWQREAADNGE
CCCCHHHCCCHHHHHHHHHHHCCCCCHHHHEHHHEECCCCCCCCCCCHHHHHHHHCCCCC
TPAVARLLFPAGLAVERDPAQAVRWISAAATAGHADAQARMGELCRHGRGCPRDLDAARD
CHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
WYGKAAAQGHAGGAFGLGDIYFQGLGVSADPAAAIGWYRQAAEAGHARAQVALASCYQNG
HHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCC
TGVAQDRAEAVRLYAEAARHDDVLALHCLGLAFLSGDGVAQSIDRAETALRKGARKGHLP
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCH
AIQALAEFYARGLGGEPDLREAAQWYQAAAEKGDVQAQFFTGRFYATGSGVAPSVREAAK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHH
WFLRAAEGGHATAAFNIAVFYRDGTGIARDVPAAISWFEKASAAGISAADIQLGRIYAAG
HHHHHCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECEEEECC
AGIERDPARAAHWLAKAAEGGDAEARTALALVLLQSDRTDEARARAAALLTDAAGSGHAP
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
AGLQLGHLKAGRFGGAPDWPAAAACYAPAAEAGLVEAMVALAGLHLDTASALTDAKAAFA
CCCEECCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
WFEKAARAGHAPSAFQLGVMYCTGNGVDMDLAQGVAWYEAAAREGHPFAQYNLAVMLSKG
HHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHCHHHHHHHHHCCCCCCEEEEEEEEECC
QGCERDQVKAVEWLRAAAEKGMAAAQRALGANVDVPATGLSFSEGGSEKT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]