| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343785
Identifier: 146343785
GI number: 146343785
Start: 7336353
End: 7338788
Strand: Reverse
Name: 146343785
Synonym: BRADO7033
Alternate gene names: NA
Gene position: 7338788-7336353 (Counterclockwise)
Preceding gene: 146343786
Following gene: 146343784
Centisome position: 98.42
GC content: 52.96
Gene sequence:
>2436_bases ATGACTGAAGAACGTTCATATCAAGACTACGCGCTCATATCAGAGAGCGGGCTTTTTGATCGTGGGTTCTACCTGAGGTC AAACCCTGATGTGGCCGAAGCGGCTGTTGACCCTTTGCAGCACTTTTGCGAGCATGGTTGGCGAGAGTTTCGTGACCCCG CGCCTTTTTTCTCGTTGCGATATTATAGCGCGTCTGCTTCCCGCCGCGAGACTATCGAAGGCAATCCATTCGTTCACTAC ATTAGGAAGGGCTTGCACGAAGGCGCGCGGACCCGGCCAGAACTCATGGGGCCTGTCGAGCCGATACCGACAATTCGGCG TGCAATGTGGGAGTCGGTAACAGGAAAGATCGACCCGGCTGAAGTGGACATCATTATCCCAGTTTATCGCGGGTTGCGTG ATACTGCGGCTTGCATTTATTCCGTTTTGACGACTGAGGTCGCAACGAGATTTCGTTTGGTTGTCGTTAACGACAAAACG CCAGAGCCGCCCCTGCAGCGATTACTAAATAAACTAGCTGGGCGAAAGCTGTTCCATTACATCGAAAACGAGCAGAACCT AGGATTTACACAGTCCGTAAACAAGGGAATGCAAGCCGGCAAAAACTCGCATAAGCTGCTTCTAAACTCCGACACCATTG TATATGCGGGCTGGTTAGATCGGATTGTGGCCCATGCTTCGAGTGGCAAGATTGGGACCATCACTCCACTCTCGAACAAC GCCACCATCTTCAGTTATCCAGAAACAAACGCAAATAACAACTACTCGATAGAAGTTCCTCTTGCGGCGTTGGACGCCAT AATTTCAGTCGTGGGTCGCGGAGCGCCAGTCGATGTGCCGACTGGCGTCGGATATTGTATGTTCATTCATCGCGACTGCT ATCATGAAGTGGGGGAATTGGATGTTGCCACGTTCAACCGCGGCTATGGTGAAGAGAATGATTACTGTGTGAGAGCTAAA GCGGCGGGATGGCGAAATGTCGCCGCGACCGATGTGTTCGTCCGCCACACAGGTGAGGTTTCGTTCGCATTAGATGCTTC GACACAGCAAAAGTCCGGCTATCTAGCGCTACTTAAGAAGCATCCGTGTTACGAGGGCGATGTTCGGAAATTTGTGTCTC GGGATCTCCTGTCGTCTGTTCGTCGGAAGATCGATGTCGCTCGTCTTCTCCTAACTGTAGTCAAAAGGAGGCTGGCGGTG TTTGTTTCGCACAACAACGGAGGTGGAATCGAGACCCACCTAAGGCAGCTCGCGGAGCAACTAGAGGGCGTGGGCTATGG CGTGTTTATTGTCTCGCCCAGCAAGACCGATCCATGTGCTGTATCGGTCAACTCATTCACCAGCCCTCTTCATGTCCCCA ACTTAGGAAACTTATCCGTCCAAGAATTTATCGGTCTCGTACTTCCGAGGTTGTTGAGCGCGGGGCTTGAGCTCTTCCAC GTACATAGCCTTGTTGGATTTGATCTGGAGCATGCGAAATCGCTCCTAGATGGAGTAAAGTCAGCCGGTGTTCGAATTGT TAGCACGGTCCATGATTACTCGGCGATATGTCCGCGGAATCAGTTGGTCGATGACGGGGAGGACTATTGTGGTCTCCCCG GCCCTCTAACCTGCCAAGAGTGTCTAAAATCCTATAGCTATCCGGGTCGCCGGACAGGCGCCGCCGTTGCGAAATATCGG TACGACTATCATCAAGTTCTATCGTTAGCGGATGTTACCTTCGTGCCATCCGAGGATACGAGGGCGCGGCTACAGCCGTT CTTGCCGGACGTTCGATTGCAAGTTCGAAGTCATCTCGAGCCATCACGGCTGCTGCCCCGTACTCCTCCGACGCGATCGG AGCTGAGTTGGGACGGAACGATCAACGTGGCAGTCATCGGAGCAATTGGGCCGCATAAAGGATCTTCGGTGATTTTCAGT TGTGCAGCTGATGCTGCGCAGCGGTCATTGCCGATCCGGTTTCACGTAATTGGCTATACAAATATCGACGAGCGTCTTCG GAGTGTGGGAGTTTCCATCACGGGTCCCTATTTCTCTGATGACGACTTGCGCCGTAGGCTGATTGAGGTGAGCCCCCGTT TTGGGTTCTTCCCGTCGATCTGGCCAGAGACGTACCTTTACACGCTGTCAGATGCTTTCGAAATTGGGCTGTTTCCAATC GCGTTTGATATCGGCGCGCAGGCGGAGCGGATAGCAGACGCGCAGTATGGTGCGTTGATCCCGGTAGAAGAGCGGTTTAA CGCTCAGTTTATAAATGATACTTTCCTGCGCCTGAACGATGAGTTGGGGCCCGATGAATGGATACCGCAAACGGGTGCTT TTGCCTCGGCCGATGACGTGTGCCTCTACTACAGATATAAAGACGATGTTCCGGCGGAGCGTGAAAAGTCGCGCTCGGAC GTGATGAGGCCTACGCCTCTGTCAATCGCTGGGTAG
Upstream 100 bases:
>100_bases GTCAGCACCACTTCGATCAATACGGAGAAAAAGAAGGCCGTTCTCCATTTGAAGACTAGTAACTTCGCATCCTTCCCTCT CCTAAGGTCAACCTGCCTCC
Downstream 100 bases:
>100_bases AGATGCGCAACTGTGTTGTGGTGGGGCTTTCAGTTATTGTTTTGGGACAGGCATACGCTTTCAGCCCTGACAATGAGAGT GTTGTTGCTGCTTTCGACAG
Product: putative glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Methyltransferase FkbM Family; Glycosyl Transferase Group 2 Family; Bifunctional SAM-Dependent Methyltransferase Type; Glycosyltransferase-Like Protein; FkbM Family Methyltransferase; DTDP-Rhamnosyl Transferase RfbF
Number of amino acids: Translated: 811; Mature: 810
Protein sequence:
>811_residues MTEERSYQDYALISESGLFDRGFYLRSNPDVAEAAVDPLQHFCEHGWREFRDPAPFFSLRYYSASASRRETIEGNPFVHY IRKGLHEGARTRPELMGPVEPIPTIRRAMWESVTGKIDPAEVDIIIPVYRGLRDTAACIYSVLTTEVATRFRLVVVNDKT PEPPLQRLLNKLAGRKLFHYIENEQNLGFTQSVNKGMQAGKNSHKLLLNSDTIVYAGWLDRIVAHASSGKIGTITPLSNN ATIFSYPETNANNNYSIEVPLAALDAIISVVGRGAPVDVPTGVGYCMFIHRDCYHEVGELDVATFNRGYGEENDYCVRAK AAGWRNVAATDVFVRHTGEVSFALDASTQQKSGYLALLKKHPCYEGDVRKFVSRDLLSSVRRKIDVARLLLTVVKRRLAV FVSHNNGGGIETHLRQLAEQLEGVGYGVFIVSPSKTDPCAVSVNSFTSPLHVPNLGNLSVQEFIGLVLPRLLSAGLELFH VHSLVGFDLEHAKSLLDGVKSAGVRIVSTVHDYSAICPRNQLVDDGEDYCGLPGPLTCQECLKSYSYPGRRTGAAVAKYR YDYHQVLSLADVTFVPSEDTRARLQPFLPDVRLQVRSHLEPSRLLPRTPPTRSELSWDGTINVAVIGAIGPHKGSSVIFS CAADAAQRSLPIRFHVIGYTNIDERLRSVGVSITGPYFSDDDLRRRLIEVSPRFGFFPSIWPETYLYTLSDAFEIGLFPI AFDIGAQAERIADAQYGALIPVEERFNAQFINDTFLRLNDELGPDEWIPQTGAFASADDVCLYYRYKDDVPAEREKSRSD VMRPTPLSIAG
Sequences:
>Translated_811_residues MTEERSYQDYALISESGLFDRGFYLRSNPDVAEAAVDPLQHFCEHGWREFRDPAPFFSLRYYSASASRRETIEGNPFVHY IRKGLHEGARTRPELMGPVEPIPTIRRAMWESVTGKIDPAEVDIIIPVYRGLRDTAACIYSVLTTEVATRFRLVVVNDKT PEPPLQRLLNKLAGRKLFHYIENEQNLGFTQSVNKGMQAGKNSHKLLLNSDTIVYAGWLDRIVAHASSGKIGTITPLSNN ATIFSYPETNANNNYSIEVPLAALDAIISVVGRGAPVDVPTGVGYCMFIHRDCYHEVGELDVATFNRGYGEENDYCVRAK AAGWRNVAATDVFVRHTGEVSFALDASTQQKSGYLALLKKHPCYEGDVRKFVSRDLLSSVRRKIDVARLLLTVVKRRLAV FVSHNNGGGIETHLRQLAEQLEGVGYGVFIVSPSKTDPCAVSVNSFTSPLHVPNLGNLSVQEFIGLVLPRLLSAGLELFH VHSLVGFDLEHAKSLLDGVKSAGVRIVSTVHDYSAICPRNQLVDDGEDYCGLPGPLTCQECLKSYSYPGRRTGAAVAKYR YDYHQVLSLADVTFVPSEDTRARLQPFLPDVRLQVRSHLEPSRLLPRTPPTRSELSWDGTINVAVIGAIGPHKGSSVIFS CAADAAQRSLPIRFHVIGYTNIDERLRSVGVSITGPYFSDDDLRRRLIEVSPRFGFFPSIWPETYLYTLSDAFEIGLFPI AFDIGAQAERIADAQYGALIPVEERFNAQFINDTFLRLNDELGPDEWIPQTGAFASADDVCLYYRYKDDVPAEREKSRSD VMRPTPLSIAG >Mature_810_residues TEERSYQDYALISESGLFDRGFYLRSNPDVAEAAVDPLQHFCEHGWREFRDPAPFFSLRYYSASASRRETIEGNPFVHYI RKGLHEGARTRPELMGPVEPIPTIRRAMWESVTGKIDPAEVDIIIPVYRGLRDTAACIYSVLTTEVATRFRLVVVNDKTP EPPLQRLLNKLAGRKLFHYIENEQNLGFTQSVNKGMQAGKNSHKLLLNSDTIVYAGWLDRIVAHASSGKIGTITPLSNNA TIFSYPETNANNNYSIEVPLAALDAIISVVGRGAPVDVPTGVGYCMFIHRDCYHEVGELDVATFNRGYGEENDYCVRAKA AGWRNVAATDVFVRHTGEVSFALDASTQQKSGYLALLKKHPCYEGDVRKFVSRDLLSSVRRKIDVARLLLTVVKRRLAVF VSHNNGGGIETHLRQLAEQLEGVGYGVFIVSPSKTDPCAVSVNSFTSPLHVPNLGNLSVQEFIGLVLPRLLSAGLELFHV HSLVGFDLEHAKSLLDGVKSAGVRIVSTVHDYSAICPRNQLVDDGEDYCGLPGPLTCQECLKSYSYPGRRTGAAVAKYRY DYHQVLSLADVTFVPSEDTRARLQPFLPDVRLQVRSHLEPSRLLPRTPPTRSELSWDGTINVAVIGAIGPHKGSSVIFSC AADAAQRSLPIRFHVIGYTNIDERLRSVGVSITGPYFSDDDLRRRLIEVSPRFGFFPSIWPETYLYTLSDAFEIGLFPIA FDIGAQAERIADAQYGALIPVEERFNAQFINDTFLRLNDELGPDEWIPQTGAFASADDVCLYYRYKDDVPAEREKSRSDV MRPTPLSIAG
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90205; Mature: 90074
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEERSYQDYALISESGLFDRGFYLRSNPDVAEAAVDPLQHFCEHGWREFRDPAPFFSLR CCCCCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE YYSASASRRETIEGNPFVHYIRKGLHEGARTRPELMGPVEPIPTIRRAMWESVTGKIDPA EECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCC EVDIIIPVYRGLRDTAACIYSVLTTEVATRFRLVVVNDKTPEPPLQRLLNKLAGRKLFHY CEEEEEHHHHCHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH IENEQNLGFTQSVNKGMQAGKNSHKLLLNSDTIVYAGWLDRIVAHASSGKIGTITPLSNN HCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHCCCCCEEEEEECCCC ATIFSYPETNANNNYSIEVPLAALDAIISVVGRGAPVDVPTGVGYCMFIHRDCYHEVGEL CEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHCCC DVATFNRGYGEENDYCVRAKAAGWRNVAATDVFVRHTGEVSFALDASTQQKSGYLALLKK EEEECCCCCCCCCCEEEEEECCCCCCCHHHEEEEEECCCEEEEEECCCCCCCCEEEEEEC HPCYEGDVRKFVSRDLLSSVRRKIDVARLLLTVVKRRLAVFVSHNNGGGIETHLRQLAEQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHH LEGVGYGVFIVSPSKTDPCAVSVNSFTSPLHVPNLGNLSVQEFIGLVLPRLLSAGLELFH HCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH VHSLVGFDLEHAKSLLDGVKSAGVRIVSTVHDYSAICPRNQLVDDGEDYCGLPGPLTCQE HHHHHCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH CLKSYSYPGRRTGAAVAKYRYDYHQVLSLADVTFVPSEDTRARLQPFLPDVRLQVRSHLE HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCHHHHHHHHCCC PSRLLPRTPPTRSELSWDGTINVAVIGAIGPHKGSSVIFSCAADAAQRSLPIRFHVIGYT HHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEHHHHHHCCCCEEEEEEEEC NIDERLRSVGVSITGPYFSDDDLRRRLIEVSPRFGFFPSIWPETYLYTLSDAFEIGLFPI CHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHCCEEE AFDIGAQAERIADAQYGALIPVEERFNAQFINDTFLRLNDELGPDEWIPQTGAFASADDV EEECCCHHHHHHCCCCCCEEEHHHCCCCEECCCHHEEECCCCCCHHCCCCCCCCCCCCCE CLYYRYKDDVPAEREKSRSDVMRPTPLSIAG EEEEEECCCCCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure TEERSYQDYALISESGLFDRGFYLRSNPDVAEAAVDPLQHFCEHGWREFRDPAPFFSLR CCCCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE YYSASASRRETIEGNPFVHYIRKGLHEGARTRPELMGPVEPIPTIRRAMWESVTGKIDPA EECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCC EVDIIIPVYRGLRDTAACIYSVLTTEVATRFRLVVVNDKTPEPPLQRLLNKLAGRKLFHY CEEEEEHHHHCHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH IENEQNLGFTQSVNKGMQAGKNSHKLLLNSDTIVYAGWLDRIVAHASSGKIGTITPLSNN HCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEEHHHHHHHHHCCCCCEEEEEECCCC ATIFSYPETNANNNYSIEVPLAALDAIISVVGRGAPVDVPTGVGYCMFIHRDCYHEVGEL CEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHCCC DVATFNRGYGEENDYCVRAKAAGWRNVAATDVFVRHTGEVSFALDASTQQKSGYLALLKK EEEECCCCCCCCCCEEEEEECCCCCCCHHHEEEEEECCCEEEEEECCCCCCCCEEEEEEC HPCYEGDVRKFVSRDLLSSVRRKIDVARLLLTVVKRRLAVFVSHNNGGGIETHLRQLAEQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHH LEGVGYGVFIVSPSKTDPCAVSVNSFTSPLHVPNLGNLSVQEFIGLVLPRLLSAGLELFH HCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHH VHSLVGFDLEHAKSLLDGVKSAGVRIVSTVHDYSAICPRNQLVDDGEDYCGLPGPLTCQE HHHHHCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH CLKSYSYPGRRTGAAVAKYRYDYHQVLSLADVTFVPSEDTRARLQPFLPDVRLQVRSHLE HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCHHHHHHHHCCC PSRLLPRTPPTRSELSWDGTINVAVIGAIGPHKGSSVIFSCAADAAQRSLPIRFHVIGYT HHHCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEHHHHHHCCCCEEEEEEEEC NIDERLRSVGVSITGPYFSDDDLRRRLIEVSPRFGFFPSIWPETYLYTLSDAFEIGLFPI CHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHCCEEE AFDIGAQAERIADAQYGALIPVEERFNAQFINDTFLRLNDELGPDEWIPQTGAFASADDV EEECCCHHHHHHCCCCCCEEEHHHCCCCEECCCHHEEECCCCCCHHCCCCCCCCCCCCCE CLYYRYKDDVPAEREKSRSDVMRPTPLSIAG EEEEEECCCCCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA