| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343777
Identifier: 146343777
GI number: 146343777
Start: 7324977
End: 7327553
Strand: Direct
Name: 146343777
Synonym: BRADO7024
Alternate gene names: NA
Gene position: 7324977-7327553 (Clockwise)
Preceding gene: 146343776
Following gene: 146343781
Centisome position: 98.23
GC content: 62.4
Gene sequence:
>2577_bases TTGGGCAGGTTCTTGGGCAACGAGTCCGAGACCACCGGATCCGCGGCGGAGCATACGGGTCCCTGGTTCAGCTCAAGGAT CCATCATCATCTGGATCTCGAACGCGCCACGGTCGCCGCATTGGAGCGCCGCGAGTACCGGCGCGCGTTTGCATTCGCAG ACAGGCGTTGCCGGATTTCTCCGCCCGCGACGGCGCGCGCGCATCTGCTACGAGCCGAAGCCCTCCATCACCTGGGCCTC GACGACGCGGCCGCGGATGCGGCCATCAAGGCCTGGGAGCTCGAGCCAGAAAACATTGCGGCCGCACGACGAACGATGGC CTGGGCGGCTGGCCGCGAGCAGCTTGAGGCCGCCCGGATCGTCGCGAGACTGGATCATGATCCGGACACAGTGCGGCTGG CCCTGCGCCACCTTCGCGCCGCCGGACAACGTGCATTCGCGCGCATGGAGTTGCTCGATCGGGAGATTGTGGGATGGGCC ACATGGCCGGTGACGAGCACGCTGCACGTCACGCTGACATCGGTCGAGCAAACCCGTACGTTCTCTCTGGCCGGCACACC CCAGCATCGGCTTGCAACAGCAGAGCACCAAGTTGCGGATTTTCGATTTGAGCGATCCCGCGAAGAGGATCTGCGGCATG TCGCGATCACGGTCGACAGACAGCTGATCCAAGAGCTTCACCTTGGCGAGAGCCCTCCCAAAGCGCTGCGCCTCGAAGGC CGGCAAAAGCCAGACCGTGCCGCCGACGAGCCTGACCAGCTCACCGTCATTGTTCCGGTTTATCGCGACCTGCATGCGAC GGCGGCCTGTCTGGGCAGCGTGATCGCCGCGATCAATGCGACACCCGATTGTCGCCTGCTGATCGTGGACGATGCATCGC CCGAGCCAGCGATCAAACATCTGCTGCAGCAACTACAGACCGGGCCCAACGTGATCGTGCTGACAAACGAGCGCAATCTT GGTTTCGTGGGCGCCGTCAACCGGGCTCTTGATGCAAGCCCAAGCGGAGACATCGTGTTGCTCAATGCGGATACGCTGGT TCCCCAGCAGGCGTTCAACAGGCTGCGCGCCGTCGTCCGCTCCGCTCCTGGCATCGGAACGGCAACACCGCTCTCGAACA ATGGCGAGTTCACCAGCTTCCCGCGCCCTAACACTCCCAATGCCCTTCCATCGCTCGAAGAAGTCGAGGATCTCGACCAG CGTGCGGCTGCAGCAAATACCGGGGTCCTCGTCGACATCCCCAATGGCATTGGCTTCTGCCTCTACCTCACGCGCGCATG CCTGGACGTTGTGGGGCGGCTCTCGGACGATTTTCAACGCGGCTATCTCGAGGATGTCGATCTTTGCTTGCGCGCCAAAG AGGCGGGCTTCAGAAACGTTTGCGTGCCCTCGGTTTTCGTCGGCCACGAGGGATCGCGATCGTTTCTCGACGAGAAGCGC GCGCTCGTCATGCGCAATCTGCGCATCCTCGAGCAACGCTATCCACGCTATTCGATCGAATGCGCCGCATTTTTGCAAGC GGATCCCCTGCGCAAGTGTCGCGCCGCATTGGAGCGGGAGGTCATCGCCGGTCAAAGTGGCGGCCGTTGGCATGTCGTGC TCTCTGGCTCCGGACCTGTGTTCGCCACCGCGACTGAAAGATCGAGATTGTCGGGCGACCGAGCGGTCGGAAGTCTGACC GTTCGGATTGATGGCGATGGGCATCAAATCTGGGCTTCTCCAATAGACATCCAAGGAGGCATCCCACAATCGCTTCGCTT CGCGCTGGCGACAGATGTCGACATTGCGGCCTTCGAGCAGTTTCTCGATGAGCATTCGACTGGAGAGATCGAAATCGTCG GAACGAGACGCATTCCGCCTCGGCTGCTCTCCTTCATCACACACCAGATCCCCTACCGCATAGTCGTTGCGGATACGTCG CTCGGCGACGGCACGTCCCAGCGCTCAGGCTTGCGGTCAAGCTGGATCGGCTTGGTGGCAGGCGCGCGACACGTTCTGAC GCTCGACTCGCGTGGAGCGCGATTTGCGGGCGAGGCCCTGCGGATCGATACAAAACCCCACATGCGGACGCTCGAGGGCA CGCGACGAGACCGATCACGGTCGACGCAAGGTGTGACCCTCTGCGTCCCTGCCTTGCGGACGACAGCCCAGGAGATCCGT TTCATGCGCGCGCTGGCGGATCAGCTCCGCTTCAATCTCCCCGGCGCGAGGCTGATAGTTCTCGGCAGAACGCTGGATGA TCTCAGTCTCATGAATGAAGATAACGTCGTCGTGACGGGCGGCGAGATATTGCCCGATGAGCTCGACGGTCTTATCGACG CATACGGTATCACTCGCGTCTTGCTGGACACCGGAGACCCGATGTTCGGACATCCACTGATCGCTGCATTGGAAGCCACC GGACTGCCGATTGCGGCAACCGACTGGCTAGCGGCGGACGCCAGCGAACACAACCTTGTCATCGCGCCCGGCCTGCCGGC TTCGAAGGCCGTTGCACAAATCATCCGCTGGCTGCAGCCGGCATCTGCCGAGCTCAAAATCCCGGCGGAGCCGCTTCAGG ATGAGGCCGCCTGTTGA
Upstream 100 bases:
>100_bases TCCGGCGCGAGGCGCCATGGATGCAGGAACCCCACGGTCAGGCGGACGTGTGAGGGTGTTCCGCAGCCGACAGAGCGCGG CCAAACCCGGCGCTTAAGTC
Downstream 100 bases:
>100_bases CGCGCGACGCCCAGGAACGCGGTGGCCAGGCGAGCGCCGAGAACGGTGGATGATCGAGCCCGAGAAGCGGATGATAATAG GGATCGTCCATCAAGGCATC
Product: putative glycosyl transferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Methyltransferase FkbM Family; Glycosyl Transferase Group 2 Family; Bifunctional SAM-Dependent Methyltransferase Type; FkbM Family Methyltransferase; Glycosyltransferase/Rhamnosyltransferase; DTDP-Rhamnosyl Transferase RfbF
Number of amino acids: Translated: 858; Mature: 857
Protein sequence:
>858_residues MGRFLGNESETTGSAAEHTGPWFSSRIHHHLDLERATVAALERREYRRAFAFADRRCRISPPATARAHLLRAEALHHLGL DDAAADAAIKAWELEPENIAAARRTMAWAAGREQLEAARIVARLDHDPDTVRLALRHLRAAGQRAFARMELLDREIVGWA TWPVTSTLHVTLTSVEQTRTFSLAGTPQHRLATAEHQVADFRFERSREEDLRHVAITVDRQLIQELHLGESPPKALRLEG RQKPDRAADEPDQLTVIVPVYRDLHATAACLGSVIAAINATPDCRLLIVDDASPEPAIKHLLQQLQTGPNVIVLTNERNL GFVGAVNRALDASPSGDIVLLNADTLVPQQAFNRLRAVVRSAPGIGTATPLSNNGEFTSFPRPNTPNALPSLEEVEDLDQ RAAAANTGVLVDIPNGIGFCLYLTRACLDVVGRLSDDFQRGYLEDVDLCLRAKEAGFRNVCVPSVFVGHEGSRSFLDEKR ALVMRNLRILEQRYPRYSIECAAFLQADPLRKCRAALEREVIAGQSGGRWHVVLSGSGPVFATATERSRLSGDRAVGSLT VRIDGDGHQIWASPIDIQGGIPQSLRFALATDVDIAAFEQFLDEHSTGEIEIVGTRRIPPRLLSFITHQIPYRIVVADTS LGDGTSQRSGLRSSWIGLVAGARHVLTLDSRGARFAGEALRIDTKPHMRTLEGTRRDRSRSTQGVTLCVPALRTTAQEIR FMRALADQLRFNLPGARLIVLGRTLDDLSLMNEDNVVVTGGEILPDELDGLIDAYGITRVLLDTGDPMFGHPLIAALEAT GLPIAATDWLAADASEHNLVIAPGLPASKAVAQIIRWLQPASAELKIPAEPLQDEAAC
Sequences:
>Translated_858_residues MGRFLGNESETTGSAAEHTGPWFSSRIHHHLDLERATVAALERREYRRAFAFADRRCRISPPATARAHLLRAEALHHLGL DDAAADAAIKAWELEPENIAAARRTMAWAAGREQLEAARIVARLDHDPDTVRLALRHLRAAGQRAFARMELLDREIVGWA TWPVTSTLHVTLTSVEQTRTFSLAGTPQHRLATAEHQVADFRFERSREEDLRHVAITVDRQLIQELHLGESPPKALRLEG RQKPDRAADEPDQLTVIVPVYRDLHATAACLGSVIAAINATPDCRLLIVDDASPEPAIKHLLQQLQTGPNVIVLTNERNL GFVGAVNRALDASPSGDIVLLNADTLVPQQAFNRLRAVVRSAPGIGTATPLSNNGEFTSFPRPNTPNALPSLEEVEDLDQ RAAAANTGVLVDIPNGIGFCLYLTRACLDVVGRLSDDFQRGYLEDVDLCLRAKEAGFRNVCVPSVFVGHEGSRSFLDEKR ALVMRNLRILEQRYPRYSIECAAFLQADPLRKCRAALEREVIAGQSGGRWHVVLSGSGPVFATATERSRLSGDRAVGSLT VRIDGDGHQIWASPIDIQGGIPQSLRFALATDVDIAAFEQFLDEHSTGEIEIVGTRRIPPRLLSFITHQIPYRIVVADTS LGDGTSQRSGLRSSWIGLVAGARHVLTLDSRGARFAGEALRIDTKPHMRTLEGTRRDRSRSTQGVTLCVPALRTTAQEIR FMRALADQLRFNLPGARLIVLGRTLDDLSLMNEDNVVVTGGEILPDELDGLIDAYGITRVLLDTGDPMFGHPLIAALEAT GLPIAATDWLAADASEHNLVIAPGLPASKAVAQIIRWLQPASAELKIPAEPLQDEAAC >Mature_857_residues GRFLGNESETTGSAAEHTGPWFSSRIHHHLDLERATVAALERREYRRAFAFADRRCRISPPATARAHLLRAEALHHLGLD DAAADAAIKAWELEPENIAAARRTMAWAAGREQLEAARIVARLDHDPDTVRLALRHLRAAGQRAFARMELLDREIVGWAT WPVTSTLHVTLTSVEQTRTFSLAGTPQHRLATAEHQVADFRFERSREEDLRHVAITVDRQLIQELHLGESPPKALRLEGR QKPDRAADEPDQLTVIVPVYRDLHATAACLGSVIAAINATPDCRLLIVDDASPEPAIKHLLQQLQTGPNVIVLTNERNLG FVGAVNRALDASPSGDIVLLNADTLVPQQAFNRLRAVVRSAPGIGTATPLSNNGEFTSFPRPNTPNALPSLEEVEDLDQR AAAANTGVLVDIPNGIGFCLYLTRACLDVVGRLSDDFQRGYLEDVDLCLRAKEAGFRNVCVPSVFVGHEGSRSFLDEKRA LVMRNLRILEQRYPRYSIECAAFLQADPLRKCRAALEREVIAGQSGGRWHVVLSGSGPVFATATERSRLSGDRAVGSLTV RIDGDGHQIWASPIDIQGGIPQSLRFALATDVDIAAFEQFLDEHSTGEIEIVGTRRIPPRLLSFITHQIPYRIVVADTSL GDGTSQRSGLRSSWIGLVAGARHVLTLDSRGARFAGEALRIDTKPHMRTLEGTRRDRSRSTQGVTLCVPALRTTAQEIRF MRALADQLRFNLPGARLIVLGRTLDDLSLMNEDNVVVTGGEILPDELDGLIDAYGITRVLLDTGDPMFGHPLIAALEATG LPIAATDWLAADASEHNLVIAPGLPASKAVAQIIRWLQPASAELKIPAEPLQDEAAC
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93789; Mature: 93657
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRFLGNESETTGSAAEHTGPWFSSRIHHHLDLERATVAALERREYRRAFAFADRRCRIS CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEECC PPATARAHLLRAEALHHLGLDDAAADAAIKAWELEPENIAAARRTMAWAAGREQLEAARI CCCHHHHHHHHHHHHHHCCCCHHHHHHHEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHH VARLDHDPDTVRLALRHLRAAGQRAFARMELLDREIVGWATWPVTSTLHVTLTSVEQTRT HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEEEEECCCCEE FSLAGTPQHRLATAEHQVADFRFERSREEDLRHVAITVDRQLIQELHLGESPPKALRLEG EEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEEEHHHHHHHHHHHCCCCCCHHHCCCC RQKPDRAADEPDQLTVIVPVYRDLHATAACLGSVIAAINATPDCRLLIVDDASPEPAIKH CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH LLQQLQTGPNVIVLTNERNLGFVGAVNRALDASPSGDIVLLNADTLVPQQAFNRLRAVVR HHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHH SAPGIGTATPLSNNGEFTSFPRPNTPNALPSLEEVEDLDQRAAAANTGVLVDIPNGIGFC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHH LYLTRACLDVVGRLSDDFQRGYLEDVDLCLRAKEAGFRNVCVPSVFVGHEGSRSFLDEKR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHH ALVMRNLRILEQRYPRYSIECAAFLQADPLRKCRAALEREVIAGQSGGRWHVVLSGSGPV HHHHHHHHHHHHHCCCCEEEEHEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCE FATATERSRLSGDRAVGSLTVRIDGDGHQIWASPIDIQGGIPQSLRFALATDVDIAAFEQ EEEECCHHHCCCCCCEEEEEEEEECCCCEEECCCEECCCCCCHHHHHHHHCCCHHHHHHH FLDEHSTGEIEIVGTRRIPPRLLSFITHQIPYRIVVADTSLGDGTSQRSGLRSSWIGLVA HHHCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHCCHHHHHHHHHH GARHVLTLDSRGARFAGEALRIDTKPHMRTLEGTRRDRSRSTQGVTLCVPALRTTAQEIR CCCEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHH FMRALADQLRFNLPGARLIVLGRTLDDLSLMNEDNVVVTGGEILPDELDGLIDAYGITRV HHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHEE LLDTGDPMFGHPLIAALEATGLPIAATDWLAADASEHNLVIAPGLPASKAVAQIIRWLQP EEECCCCCCCCHHHHHHHHCCCCEEECCHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCC ASAELKIPAEPLQDEAAC CCCCEECCCCCCCCCCCC >Mature Secondary Structure GRFLGNESETTGSAAEHTGPWFSSRIHHHLDLERATVAALERREYRRAFAFADRRCRIS CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEECC PPATARAHLLRAEALHHLGLDDAAADAAIKAWELEPENIAAARRTMAWAAGREQLEAARI CCCHHHHHHHHHHHHHHCCCCHHHHHHHEEEEECCCHHHHHHHHHHHHHHCHHHHHHHHH VARLDHDPDTVRLALRHLRAAGQRAFARMELLDREIVGWATWPVTSTLHVTLTSVEQTRT HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEEEEEEECCCCEE FSLAGTPQHRLATAEHQVADFRFERSREEDLRHVAITVDRQLIQELHLGESPPKALRLEG EEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEEEHHHHHHHHHHHCCCCCCHHHCCCC RQKPDRAADEPDQLTVIVPVYRDLHATAACLGSVIAAINATPDCRLLIVDDASPEPAIKH CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHH LLQQLQTGPNVIVLTNERNLGFVGAVNRALDASPSGDIVLLNADTLVPQQAFNRLRAVVR HHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHH SAPGIGTATPLSNNGEFTSFPRPNTPNALPSLEEVEDLDQRAAAANTGVLVDIPNGIGFC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHH LYLTRACLDVVGRLSDDFQRGYLEDVDLCLRAKEAGFRNVCVPSVFVGHEGSRSFLDEKR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHH ALVMRNLRILEQRYPRYSIECAAFLQADPLRKCRAALEREVIAGQSGGRWHVVLSGSGPV HHHHHHHHHHHHHCCCCEEEEHEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCE FATATERSRLSGDRAVGSLTVRIDGDGHQIWASPIDIQGGIPQSLRFALATDVDIAAFEQ EEEECCHHHCCCCCCEEEEEEEEECCCCEEECCCEECCCCCCHHHHHHHHCCCHHHHHHH FLDEHSTGEIEIVGTRRIPPRLLSFITHQIPYRIVVADTSLGDGTSQRSGLRSSWIGLVA HHHCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCHHCCHHHHHHHHHH GARHVLTLDSRGARFAGEALRIDTKPHMRTLEGTRRDRSRSTQGVTLCVPALRTTAQEIR CCCEEEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHH FMRALADQLRFNLPGARLIVLGRTLDDLSLMNEDNVVVTGGEILPDELDGLIDAYGITRV HHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHEE LLDTGDPMFGHPLIAALEATGLPIAATDWLAADASEHNLVIAPGLPASKAVAQIIRWLQP EEECCCCCCCCHHHHHHHHCCCCEEECCHHCCCCCCCCEEEECCCCHHHHHHHHHHHHCC ASAELKIPAEPLQDEAAC CCCCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA