| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343775
Identifier: 146343775
GI number: 146343775
Start: 7322693
End: 7323943
Strand: Reverse
Name: 146343775
Synonym: BRADO7022
Alternate gene names: NA
Gene position: 7323943-7322693 (Counterclockwise)
Preceding gene: 146343778
Following gene: 146343774
Centisome position: 98.22
GC content: 58.99
Gene sequence:
>1251_bases TTGCGCTATCTGAACTTCAGCGGCGCCGGAGTTTCCCATTTCCCGATGAACATTCTTTTTGTCCATAACAATTTTCCGGC CCAATACCGGCATCTCGCTCGGGCGCTTTCGGAAAACCAGGACCACACCGTGGTGGCCGTCGGTTCGACCACCGCCAAGG CGACGCCTGGCGTGCGACTGCTGAAATATTCGAGCCCGATATCGGATCCGACGCTGGTGCATCCGTTCGCGCGGCGTTTC GATCTCGAATGTCGTCGCGCCGAGGAGGTCCTCTATATTCTTTCCTCTCTCGCCGGTCAGGGATTCGTGCCGGACCTGAT CTTTGCCCATCCCGGATGGGGCGAGACACTGCCGCTGCGAACGATGTTCCCGAAGGCGCGCATCGTGCTGTATTGCGAAT TCTTCTACGCGGCCGAAGGCCGCGACGTTGGTTTCGATCCGGAGTTTCCCTCGACAGGATTGGACGGTCATGTCGCCCTC CACCTGAAGAACGCCAGTTCGCTCCTGGCGTTGGCCGAATGCGATGCGGGCGTATCGCCAACGCCGTGGCAGAAATCGAC CTTTCCGAGTGAGTTCCAGAGCAAGATCCAAGTGGTTCACGAAGGTGTCGACGTGGACGAGGCGAAGCCGGATCCTGACG CCACACTGCTGCTGCCGAACGGTCTCTGGCTATCGCCGAATGATGAGGTCATTACCTACGTGTCGCGCAATCTCGAGCCG CTGCGGGGATTCCACATCTTCATGCGCTCGCTCCCCCGAATCCTGCAGGCGCGACCGAATGCGCAGGTTCTGATCGTGGG CGGCAGCGGAACTTCATATGGTGCGCAGCCGCCAAAAGGCACGACATGGAAGTCGAAGTTCCTCGACGAGGTTCGCCCGG AGATCGATCTGCGCCGCGTCCATTTCCTCGGTCAGATCCCACGTGATCAGTACCTGCAGGTTCTGCAGGTTTCGTCGGTG CATGTTTACCTGACGTATCCCTTCGTGCTGTCCTGGTCATGCCTCGAGGCGATGAGCGCGGGCTGTGTCGTTGTCGCATC AGATACGCCGCCGCTTCGCGATGTGATCTCGCCTGAGACTGGCATCCTGGTCCCGTTCTTTGATATTGATGCGTTGTCCG AGAAGGTCATCTCGGTCCTGTCACGTCCCAGATCGTTCCAGAACATGCGCGCCAAGGCTCGGCTCTTCGTCGAAGAGAAC TATGATGCTCTGCGGGTGTGCCTGCCTGAAATGCTGAAGCTCGTTCACTGA
Upstream 100 bases:
>100_bases GTACAATGTGTACCAAAAAAATGTGCTACAGAAGAGACTTAACGTTAATCCGTGAACATATATCAACGCCGCTTGGCGCG AAAGGCTCTCCGGGAAATTC
Downstream 100 bases:
>100_bases GAGCATCCCGCTTGAGCTCGACGCCTGTTGTGATCGCTGTCGCCCAGCGCAAGGGCGGGGTCGGCAAAACGACCTTGGCT GTCCTGCTGGCGGCCGAGAT
Product: putative glycosyl transferase
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MRYLNFSGAGVSHFPMNILFVHNNFPAQYRHLARALSENQDHTVVAVGSTTAKATPGVRLLKYSSPISDPTLVHPFARRF DLECRRAEEVLYILSSLAGQGFVPDLIFAHPGWGETLPLRTMFPKARIVLYCEFFYAAEGRDVGFDPEFPSTGLDGHVAL HLKNASSLLALAECDAGVSPTPWQKSTFPSEFQSKIQVVHEGVDVDEAKPDPDATLLLPNGLWLSPNDEVITYVSRNLEP LRGFHIFMRSLPRILQARPNAQVLIVGGSGTSYGAQPPKGTTWKSKFLDEVRPEIDLRRVHFLGQIPRDQYLQVLQVSSV HVYLTYPFVLSWSCLEAMSAGCVVVASDTPPLRDVISPETGILVPFFDIDALSEKVISVLSRPRSFQNMRAKARLFVEEN YDALRVCLPEMLKLVH
Sequences:
>Translated_416_residues MRYLNFSGAGVSHFPMNILFVHNNFPAQYRHLARALSENQDHTVVAVGSTTAKATPGVRLLKYSSPISDPTLVHPFARRF DLECRRAEEVLYILSSLAGQGFVPDLIFAHPGWGETLPLRTMFPKARIVLYCEFFYAAEGRDVGFDPEFPSTGLDGHVAL HLKNASSLLALAECDAGVSPTPWQKSTFPSEFQSKIQVVHEGVDVDEAKPDPDATLLLPNGLWLSPNDEVITYVSRNLEP LRGFHIFMRSLPRILQARPNAQVLIVGGSGTSYGAQPPKGTTWKSKFLDEVRPEIDLRRVHFLGQIPRDQYLQVLQVSSV HVYLTYPFVLSWSCLEAMSAGCVVVASDTPPLRDVISPETGILVPFFDIDALSEKVISVLSRPRSFQNMRAKARLFVEEN YDALRVCLPEMLKLVH >Mature_416_residues MRYLNFSGAGVSHFPMNILFVHNNFPAQYRHLARALSENQDHTVVAVGSTTAKATPGVRLLKYSSPISDPTLVHPFARRF DLECRRAEEVLYILSSLAGQGFVPDLIFAHPGWGETLPLRTMFPKARIVLYCEFFYAAEGRDVGFDPEFPSTGLDGHVAL HLKNASSLLALAECDAGVSPTPWQKSTFPSEFQSKIQVVHEGVDVDEAKPDPDATLLLPNGLWLSPNDEVITYVSRNLEP LRGFHIFMRSLPRILQARPNAQVLIVGGSGTSYGAQPPKGTTWKSKFLDEVRPEIDLRRVHFLGQIPRDQYLQVLQVSSV HVYLTYPFVLSWSCLEAMSAGCVVVASDTPPLRDVISPETGILVPFFDIDALSEKVISVLSRPRSFQNMRAKARLFVEEN YDALRVCLPEMLKLVH
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46388; Mature: 46388
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLNFSGAGVSHFPMNILFVHNNFPAQYRHLARALSENQDHTVVAVGSTTAKATPGVRL CEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEE LKYSSPISDPTLVHPFARRFDLECRRAEEVLYILSSLAGQGFVPDLIFAHPGWGETLPLR EEECCCCCCCCEECHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCCHH TMFPKARIVLYCEFFYAAEGRDVGFDPEFPSTGLDGHVALHLKNASSLLALAECDAGVSP HHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCC TPWQKSTFPSEFQSKIQVVHEGVDVDEAKPDPDATLLLPNGLWLSPNDEVITYVSRNLEP CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEECCCCCEEEEECCCCCH LRGFHIFMRSLPRILQARPNAQVLIVGGSGTSYGAQPPKGTTWKSKFLDEVRPEIDLRRV HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHH HFLGQIPRDQYLQVLQVSSVHVYLTYPFVLSWSCLEAMSAGCVVVASDTPPLRDVISPET HHHHCCCHHHHHHHHEECEEEEEEEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCC GILVPFFDIDALSEKVISVLSRPRSFQNMRAKARLFVEENYDALRVCLPEMLKLVH CEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRYLNFSGAGVSHFPMNILFVHNNFPAQYRHLARALSENQDHTVVAVGSTTAKATPGVRL CEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEE LKYSSPISDPTLVHPFARRFDLECRRAEEVLYILSSLAGQGFVPDLIFAHPGWGETLPLR EEECCCCCCCCEECHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCCHH TMFPKARIVLYCEFFYAAEGRDVGFDPEFPSTGLDGHVALHLKNASSLLALAECDAGVSP HHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCC TPWQKSTFPSEFQSKIQVVHEGVDVDEAKPDPDATLLLPNGLWLSPNDEVITYVSRNLEP CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEECCCCCEEEEECCCCCH LRGFHIFMRSLPRILQARPNAQVLIVGGSGTSYGAQPPKGTTWKSKFLDEVRPEIDLRRV HHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHH HFLGQIPRDQYLQVLQVSSVHVYLTYPFVLSWSCLEAMSAGCVVVASDTPPLRDVISPET HHHHCCCHHHHHHHHEECEEEEEEEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCCC GILVPFFDIDALSEKVISVLSRPRSFQNMRAKARLFVEENYDALRVCLPEMLKLVH CEEEEEECHHHHHHHHHHHHHCCHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA